Clone FI20215 Report

Search the DGRC for FI20215

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:202
Well:15
Vector:pFlc-1
Associated Gene/TranscriptCG6018-RA
Protein status:FI20215.pep: gold
Sequenced Size:1964

Clone Sequence Records

FI20215.complete Sequence

1964 bp assembled on 2012-04-17

GenBank Submission: BT133455.1

> FI20215.complete
CTCTGTCTGGCATTCGAGCGCGTTGGAAGTGTCAGAGAGGATTGCAGCCA
AAAGTAGCTTGTAGTGCGTATACATATATATAAGTACCATCGTTGAGATT
AGGAAGCAATGGATTTGCGCGTGAGCTTTAGTGACAAGCTGAAACTGGGC
GCCAAGATTATTGGCCATAAGGTGGTTCAGTACAAGCTGGGCACGGGTCA
GACCAAGGAGCTGGCCACCAAATATGGCCAGCTGAAGGGTCAGCAGCGCA
GGACACTCTACGATGGCGAACCCTACTACTCCTTCGAGGGCATTCCCTTT
GCCCAGCCGCCCGTGGGTGAGCTGCGTTTTCGCGCACCCCAACCACCGAG
CTCGTGGCAGGGCGTCAGGGATTGCACCTATGCCAGGGAGAAGCCTATGC
AGAGGAACTCCATTACTAACGCTGCCGAAGGATCCGAGGATTGCCTCTAC
CTCAATGTCTACGCCAAGAGGCTCGAGTCCCCGAAACCACTGCCCGTAAT
GGTCTGGATATTCGGTGGGGGCTTTCAGGTAGGCGGTGCATCGCGGGAAC
TCTATGGACCGGATTACTTTATGAAGCACGATATCCTGCTGGTCACCATC
AACTATCGGGTGGGTGTCCTGGGCTTCCTAAGTCTCAAGGACAAGGAGCT
CAAGATACCTGGAAATGCGGGACTGAAGGACCAAATCCAAGCACTGCGTT
GGGTCAAGGAGAACATAGCCAGTTTCAATGGCGATCCTGAGAGCATAACC
GTATTCGGCGAATCAGCTGGCGGAGCATCCACGCACATCCTCATGCAAAC
GGAGCAGGCCAGAGGACTCTTCCACCGCGCCATCGTTCAATCTGGTTCAG
CTTTGTGCGCCTGGGCGACGCAACCGGATCGAAAGTGGCCACAGAGATTG
GGTAAGGAACTGGGCTATGCCGGCAATTTGGAGAGCGAGAAGGAACTGTT
GGAGTTCTTCCAGCAAATTCCGGCCAGCAAGTTGGCCCAGTACTGCAATT
CAATCGTAACGCAGGAGGAGCAGCGCGACTACGAGATCTTGGCCTTTGCC
CCGGTTATCGAGCCATATGTTGGCGATGATTGCGTGATCCCAAAATCGCA
GCAAGAGCAGCTGTCCAGCGCCTGGGGTAATTCCATTCCCATGATCATAG
GCGGAACTTCGTTCGAAGGACTCTTCTCTTATCGCACCACCCTGGATGAT
CCGCTTTACATGCTGAGTGCCTTCGAGGCCATAATTCCCAAACAGGTTCG
CGATGCCATCGACAAGGAGGAGCTGGCGGAGATGGTGAGGAGGCTGAAGA
AGTCCTACTTTGACGATCCCGACCGGGCCAGCATGGAGCTCTACGAGTGC
CTTCACATTCTGAGCATCAAGAACTTCTGGCACGATATCCATCGCACCTT
GCTCGCTCGCCTGGCCTATGCCACCAACTTGCCCACGTATCTCTATCGAT
TCGATATGGATTCGCCACACTTTAATCACTATCGCATCTTGAAGTGCGGC
AAAAAGGTGAGGGGTGTGTGCCATGCGGATGACATTTCCTACATGTTCTA
CGGCATACTCTCCAGTAAACTGGACAAGAATTCGCCCGAATACCGCACCA
TCGAGCGACTGGTGGGCATGTGGACATCTTTCGCCACCACCGGAGATCCC
AACTGTGAGATAATCGCTCCCGTCAAGTGGGATCCACTGCGTCCGGGTGG
CGTGGAAAACTGCCTTAACATTGCCGATGGCCTGGAGTTCATTCCGCTGC
CGGAGAGCAAACAATTTGTGGTCTGGGATAGTTTTTACACCAGGGAAAGC
CTCTACTAAGGAATTTGGAATATATGTACGTGTTTGGGAAATCTGTTGTT
AGCTTTATGTGAAATTAATCTTCTGTGTTTTCATCTGTGAAACTTCAAGG
GTCTCTATAACATTTACTAGCCTAATAAATACTTTCTCTTAGTTAAACTA
AAAAAAAAAAAAAA

FI20215.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 13:48:03
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 18436835..18438628 156..1949 8685 98.9 Plus
chr2R 21145070 chr2R 18436614..18436770 1..156 720 98.7 Plus
chr3R 27901430 chr3R 3374077..3374228 401..250 220 76.3 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 13:48:01
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 22550320..22552114 156..1950 8975 100 Plus
2R 25286936 2R 22550100..22550255 1..156 780 100 Plus
3R 32079331 3R 7547991..7548142 401..250 220 76.3 Minus
Blast to na_te.dros performed on 2019-03-15 13:48:02 has no hits.

FI20215.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 13:48:59 Download gff for FI20215.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 18436614..18436769 1..155 98 -> Plus
chr2R 18436835..18438628 156..1949 98   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-04-17 17:25:43 Download gff for FI20215.complete
Subject Subject Range Query Range Percent Splice Strand
CG6018-RA 1..1701 109..1809 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 22:12:49 Download gff for FI20215.complete
Subject Subject Range Query Range Percent Splice Strand
CG6018-RA 1..1701 109..1809 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:41:13 Download gff for FI20215.complete
Subject Subject Range Query Range Percent Splice Strand
CG6018-RA 1..1701 109..1809 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-17 17:25:43 Download gff for FI20215.complete
Subject Subject Range Query Range Percent Splice Strand
CG6018-RA 1..1949 1..1949 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 22:12:49 Download gff for FI20215.complete
Subject Subject Range Query Range Percent Splice Strand
CG6018-RA 7..1955 1..1949 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:41:13 Download gff for FI20215.complete
Subject Subject Range Query Range Percent Splice Strand
CG6018-RA 7..1955 1..1949 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:48:59 Download gff for FI20215.complete
Subject Subject Range Query Range Percent Splice Strand
2R 22550100..22550254 1..155 100 -> Plus
2R 22550320..22552113 156..1949 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:48:59 Download gff for FI20215.complete
Subject Subject Range Query Range Percent Splice Strand
2R 22550100..22550254 1..155 100 -> Plus
2R 22550320..22552113 156..1949 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:48:59 Download gff for FI20215.complete
Subject Subject Range Query Range Percent Splice Strand
2R 22550100..22550254 1..155 100 -> Plus
2R 22550320..22552113 156..1949 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 22:12:49 Download gff for FI20215.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 18437605..18437759 1..155 100 -> Plus
arm_2R 18437825..18439618 156..1949 100   Plus

FI20215.hyp Sequence

Translation from 108 to 1808

> FI20215.hyp
MDLRVSFSDKLKLGAKIIGHKVVQYKLGTGQTKELATKYGQLKGQQRRTL
YDGEPYYSFEGIPFAQPPVGELRFRAPQPPSSWQGVRDCTYAREKPMQRN
SITNAAEGSEDCLYLNVYAKRLESPKPLPVMVWIFGGGFQVGGASRELYG
PDYFMKHDILLVTINYRVGVLGFLSLKDKELKIPGNAGLKDQIQALRWVK
ENIASFNGDPESITVFGESAGGASTHILMQTEQARGLFHRAIVQSGSALC
AWATQPDRKWPQRLGKELGYAGNLESEKELLEFFQQIPASKLAQYCNSIV
TQEEQRDYEILAFAPVIEPYVGDDCVIPKSQQEQLSSAWGNSIPMIIGGT
SFEGLFSYRTTLDDPLYMLSAFEAIIPKQVRDAIDKEELAEMVRRLKKSY
FDDPDRASMELYECLHILSIKNFWHDIHRTLLARLAYATNLPTYLYRFDM
DSPHFNHYRILKCGKKVRGVCHADDISYMFYGILSSKLDKNSPEYRTIER
LVGMWTSFATTGDPNCEIIAPVKWDPLRPGGVENCLNIADGLEFIPLPES
KQFVVWDSFYTRESLY*

FI20215.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:29:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG6018-PA 566 CG6018-PA 1..566 1..566 3006 100 Plus
alpha-Est1-PA 565 CG1031-PA 1..565 1..566 1915 60.1 Plus
alpha-Est2-PB 566 CG2505-PB 1..566 1..566 1761 56.2 Plus
alpha-Est2-PA 566 CG2505-PA 1..566 1..566 1761 56.2 Plus
alpha-Est9-PC 569 CG1128-PC 8..568 9..565 1439 48.3 Plus

FI20215.pep Sequence

Translation from 108 to 1808

> FI20215.pep
MDLRVSFSDKLKLGAKIIGHKVVQYKLGTGQTKELATKYGQLKGQQRRTL
YDGEPYYSFEGIPFAQPPVGELRFRAPQPPSSWQGVRDCTYAREKPMQRN
SITNAAEGSEDCLYLNVYAKRLESPKPLPVMVWIFGGGFQVGGASRELYG
PDYFMKHDILLVTINYRVGVLGFLSLKDKELKIPGNAGLKDQIQALRWVK
ENIASFNGDPESITVFGESAGGASTHILMQTEQARGLFHRAIVQSGSALC
AWATQPDRKWPQRLGKELGYAGNLESEKELLEFFQQIPASKLAQYCNSIV
TQEEQRDYEILAFAPVIEPYVGDDCVIPKSQQEQLSSAWGNSIPMIIGGT
SFEGLFSYRTTLDDPLYMLSAFEAIIPKQVRDAIDKEELAEMVRRLKKSY
FDDPDRASMELYECLHILSIKNFWHDIHRTLLARLAYATNLPTYLYRFDM
DSPHFNHYRILKCGKKVRGVCHADDISYMFYGILSSKLDKNSPEYRTIER
LVGMWTSFATTGDPNCEIIAPVKWDPLRPGGVENCLNIADGLEFIPLPES
KQFVVWDSFYTRESLY*

FI20215.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:37:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF11899-PA 566 GF11899-PA 1..566 1..566 2627 82.7 Plus
Dana\GF17291-PA 565 GF17291-PA 1..564 1..565 1922 60.4 Plus
Dana\GF17678-PA 566 GF17678-PA 1..566 1..566 1815 56.3 Plus
Dana\GF17302-PA 554 GF17302-PA 1..553 17..565 1415 47.6 Plus
Dana\GF17300-PA 574 GF17300-PA 1..574 1..566 1408 47.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:37:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG21053-PA 566 GG21053-PA 1..566 1..566 2936 95.2 Plus
Dere\GG25062-PA 565 GG25062-PA 1..565 1..566 1951 60.1 Plus
Dere\GG14130-PA 566 GG14130-PA 1..566 1..566 1813 56.7 Plus
Dere\GG25172-PA 554 GG25172-PA 1..553 17..565 1417 48.1 Plus
Dere\GG25150-PA 574 GG25150-PA 1..574 1..566 1388 46.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:37:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH20471-PA 566 GH20471-PA 1..566 1..566 2311 71.9 Plus
Dgri\GH18313-PA 564 GH18313-PA 1..564 1..566 1871 59.2 Plus
Dgri\GH18314-PA 566 GH18314-PA 1..566 1..566 1815 56.2 Plus
Dgri\GH19275-PA 553 GH19275-PA 1..552 17..565 1389 46.5 Plus
Dgri\GH19267-PA 541 GH19267-PA 9..541 34..566 1381 50 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:11:39
Subject Length Description Subject Range Query Range Score Percent Strand
gas-PA 566 CG6018-PA 1..566 1..566 3006 100 Plus
alpha-Est1-PA 565 CG1031-PA 1..565 1..566 1915 60.1 Plus
alpha-Est2-PB 566 CG2505-PB 1..566 1..566 1761 56.2 Plus
alpha-Est2-PA 566 CG2505-PA 1..566 1..566 1761 56.2 Plus
alpha-Est9-PC 569 CG1128-PC 8..568 9..565 1439 48.3 Plus
alpha-Est9-PD 587 CG1128-PD 8..586 9..565 1410 46.8 Plus
alpha-Est5-PA 542 CG1089-PA 8..541 31..565 1393 51.1 Plus
alpha-Est5-PB 543 CG1089-PB 9..542 31..565 1393 51.1 Plus
alpha-Est8-PA 574 CG1121-PA 1..574 1..566 1377 46.4 Plus
alpha-Est7-PA 572 CG1112-PA 1..564 1..560 1304 47.5 Plus
alpha-Est10-PB 567 CG1131-PB 4..567 2..565 1282 44.6 Plus
alpha-Est10-PC 581 CG1131-PC 32..581 16..565 1255 44.5 Plus
alpha-Est10-PD 550 CG1131-PD 2..550 17..565 1254 44.6 Plus
alpha-Est3-PD 543 CG1257-PD 2..537 31..558 1223 45.5 Plus
alpha-Est3-PB 543 CG1257-PB 2..537 31..558 1223 45.5 Plus
alpha-Est3-PA 543 CG1257-PA 2..537 31..558 1223 45.5 Plus
alpha-Est6-PA 568 CG1108-PA 36..565 28..561 1028 41.2 Plus
alpha-Est4-PA 541 CG1082-PA 14..533 37..560 943 39.6 Plus
CG10175-PE 644 CG10175-PE 95..636 37..560 829 36.5 Plus
CG10175-PA 644 CG10175-PA 95..636 37..560 829 36.5 Plus
CG10175-PC 659 CG10175-PC 110..651 37..560 829 36.5 Plus
CG10175-PD 707 CG10175-PD 158..699 37..560 829 36.5 Plus
CG10175-PB 524 CG10175-PB 3..516 64..560 795 36.6 Plus
clt-PA 562 CG9858-PA 21..549 34..562 747 36.1 Plus
CG6414-PB 583 CG6414-PB 46..518 49..515 663 36.3 Plus
CG6414-PA 583 CG6414-PA 46..518 49..515 663 36.3 Plus
Jhe-PB 579 CG8425-PB 40..554 40..552 567 32.3 Plus
Jhe-PC 579 CG8425-PC 40..554 40..552 567 32.3 Plus
Jhe-PA 579 CG8425-PA 40..554 40..552 567 32.3 Plus
CG4382-PB 580 CG4382-PB 36..536 30..526 555 31.8 Plus
CG4757-PB 550 CG4757-PB 22..525 34..542 494 30.8 Plus
CG4757-PA 550 CG4757-PA 22..525 34..542 494 30.8 Plus
Jhedup-PA 559 CG8424-PA 28..507 44..512 484 31.2 Plus
Est-Q-PA 559 CG7529-PA 43..510 32..514 474 29.3 Plus
Est-6-PB 544 CG6917-PB 35..504 40..511 443 29.7 Plus
Est-6-PA 544 CG6917-PA 35..504 40..511 443 29.7 Plus
CG3841-PB 564 CG3841-PB 15..490 17..514 443 29.5 Plus
CG3841-PA 564 CG3841-PA 15..490 17..514 443 29.5 Plus
Est-P-PA 544 CG17148-PA 32..347 40..363 424 35.2 Plus
Gli-PF 956 CG3903-PF 137..390 35..269 411 41.3 Plus
Gli-PE 956 CG3903-PE 137..390 35..269 411 41.3 Plus
Gli-PD 956 CG3903-PD 137..390 35..269 411 41.3 Plus
Gli-PC 956 CG3903-PC 137..390 35..269 411 41.3 Plus
Gli-PA 956 CG3903-PA 137..390 35..269 411 41.3 Plus
CG9289-PA 674 CG9289-PA 84..564 40..514 398 30.2 Plus
Ace-PC 636 CG17907-PC 47..560 37..514 379 25.5 Plus
Ace-PB 649 CG17907-PB 47..560 37..514 379 25.5 Plus
Ace-PA 649 CG17907-PA 47..560 37..514 379 25.5 Plus
Nlg1-PE 1354 CG31146-PE 155..400 32..253 342 36.1 Plus
Nlg1-PD 1354 CG31146-PD 155..400 32..253 342 36.1 Plus
Glt-PD 1026 CG9280-PD 64..546 36..515 334 28 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:37:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI21011-PA 566 GI21011-PA 1..566 1..566 2299 71.7 Plus
Dmoj\GI24124-PA 566 GI24124-PA 1..566 1..566 1865 56.7 Plus
Dmoj\GI24123-PA 564 GI24123-PA 1..564 1..566 1855 58.3 Plus
Dmoj\GI23476-PA 540 GI23476-PA 9..540 34..566 1412 51 Plus
Dmoj\GI23480-PA 579 GI23480-PA 1..577 1..565 1407 47.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:37:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL11587-PA 566 GL11587-PA 1..566 1..566 2487 80.2 Plus
Dper\GL12163-PA 567 GL12163-PA 1..563 1..564 1960 59.4 Plus
Dper\GL12447-PA 566 GL12447-PA 1..566 1..566 1809 56.9 Plus
Dper\GL12173-PA 582 GL12173-PA 1..582 1..566 1411 47.4 Plus
Dper\GL12177-PA 563 GL12177-PA 1..563 3..565 1323 44.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:37:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA19300-PA 566 GA19300-PA 1..566 1..566 2491 80.4 Plus
Dpse\GA26212-PA 567 GA26212-PA 1..563 1..564 1960 59.4 Plus
Dpse\GA15379-PA 566 GA15379-PA 1..566 1..566 1802 56.7 Plus
Dpse\GA10843-PA 582 GA10843-PA 1..582 1..566 1414 47.4 Plus
Dpse\GA10886-PA 554 GA10886-PA 1..553 17..565 1409 47.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:37:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM15920-PA 566 GM15920-PA 1..566 1..566 2993 98.1 Plus
Dsec\GM10467-PA 565 GM10467-PA 1..565 1..566 1927 59 Plus
Dsec\GM10966-PA 566 GM10966-PA 1..566 1..566 1798 56.2 Plus
Dsec\GM10476-PA 574 GM10476-PA 1..574 1..566 1393 46.4 Plus
Dsec\GM10471-PA 540 GM10471-PA 6..539 31..565 1387 50.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:37:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD11676-PA 566 GD11676-PA 1..566 1..566 3017 98.6 Plus
Dsim\GD19469-PA 565 GD19469-PA 1..565 1..566 1936 59.2 Plus
Dsim\GD19941-PA 566 GD19941-PA 1..566 1..566 1794 56 Plus
Dsim\GD19480-PA 554 GD19480-PA 1..553 17..565 1408 47.7 Plus
Dsim\GD19472-PA 540 GD19472-PA 6..539 31..565 1399 51.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:37:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ21934-PA 566 GJ21934-PA 1..566 1..566 2332 74 Plus
Dvir\GJ10945-PA 564 GJ10945-PA 1..564 1..566 1884 59.7 Plus
Dvir\GJ10947-PA 566 GJ10947-PA 1..566 1..566 1864 56.9 Plus
Dvir\GJ10946-PA 564 GJ10946-PA 1..564 1..566 1752 55.7 Plus
Dvir\GJ10235-PA 554 GJ10235-PA 1..553 17..565 1423 47.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:37:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK22160-PA 565 GK22160-PA 1..565 1..566 2559 80.9 Plus
Dwil\GK11069-PA 565 GK11069-PA 1..565 1..566 1915 59.5 Plus
Dwil\GK12015-PA 566 GK12015-PA 1..566 1..566 1855 57.6 Plus
Dwil\GK11081-PA 554 GK11081-PA 1..553 17..565 1415 47 Plus
Dwil\GK11071-PA 540 GK11071-PA 6..540 31..566 1373 49.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:37:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE13995-PA 566 GE13995-PA 1..566 1..566 2945 95.1 Plus
Dyak\GE11113-PA 565 GE11113-PA 1..565 1..566 1949 59.4 Plus
Dyak\GE11183-PA 566 GE11183-PA 1..566 1..566 1812 56.2 Plus
Dyak\GE25781-PA 940 GE25781-PA 406..939 31..565 1450 51.4 Plus
Dyak\GE24932-PA 540 GE24932-PA 6..539 31..565 1429 50.8 Plus
Dyak\GE25781-PA 940 GE25781-PA 12..368 35..396 717 40.7 Plus