Clone FI20276 Report

Search the DGRC for FI20276

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:202
Well:76
Vector:pFlc-1
Associated Gene/TranscriptWnt2-RA
Protein status:FI20276.pep: gold
Sequenced Size:2252

Clone Sequence Records

FI20276.complete Sequence

2252 bp assembled on 2012-04-18

GenBank Submission: BT133463.1

> FI20276.complete
AGTTCTTATACGACACTCGCACCCGTCGGTCGAGCGATTACTTAGTTCCT
CTCCACTCGACAAAGTCGGAACGATTCACATCCATCTCGCCGTTCCTGGA
CCACTCCGATTGTCGGCTCGGCTCTTTAATTGCGTCACTAATGAGCTGCA
TTTATGTTAATCTCCGCACCCGGGACGTCTAAGCGCTACACGATCCCAAG
ATTTGGGATCTTCGCAGCATTCGGCATTCGGCACTTCTTGTGCTTTTCTT
TTTTGGTAGTTTTCACCTGCTGAGCCGTTTATGGTTATTGCCGCAATTCC
GTTGTGACAGTCGGAGGCGCTTTATCATAAATTAAAAAATCGTGTAGTCG
GCGAGGGACCGCTGGACCGCTGGACCACTGGACAGTTGGACAGTTGGACC
GATGGACAGCCCCGCCCCCTGATATCCATTGATGGATGATGTTGCCGCTG
ATGGCAGTTTCGGCTCTGAGTTATGGCCAAGTCGGGCCAAGCCGGAGATT
TGCATGAATGAAACGCACGCGTTGCCCGAAAACTGTTTGGTGATCCGATC
TCGCGATGACTTAATTGAAACGCCGTTGGCTGGAGCAGAAGAAGGTGTTA
ATTAGCATACGAACAAATGGACAAAAGCTCGCGTGTATTTTGTATACTCC
GTATATTGTATTTCGGTATTCGATCGTCGGTCTTGGCTTCGGTTTTGGAT
TTGGTCATATTCGCAGAGTGTATTGAATGCTGCCGTCTGCGTTTTCGGTT
CATTAATAACAACAGAGCCGATCGTACGATTCACTTCTAATAGTTCGATT
CTCGGCTCCAATGGCGGCGTTTTATGGCTGAAAACAAAGGCCCTGCGGAA
TTGTGGAACTGTGGAACTGTGGAAATCGGAGCCTGCTAAGCTCAGCAGAA
ACGGCAAAGGAAGGGAAATTAAGCCTCGAATGCATTGGGTATTGAGACTT
TTTTAGTGCGAATAGAATATGATGATAGTGCCAGCTGCTGGGCTCGAATT
CGTGTTGTGTGCCTCGGATTTGCATCGTCATGTGGAAAATACATAACAAG
CTCTTAATCTACATACTCTGGATTATGGAAATAAGATTAGTGTCCAGCTT
TACATCCGTCATGCTCTGTGGCCGGATTCCGGGCCTGACCCCGGGCCAGC
GAAATATGTGCCGCGAGATGCCCGACGCACTGATTGCCCTGGGCGAGGGC
CACCAATTGGGCGCCCAGGAGTGCCAGCACCAGTTCCGAGGACACCGCTG
GAACTGCTCGGAGGTGTGGCAGCGCAACGTCTTCGCCCATGTCATACCCA
CAGCTTCTCGTGAGGCTGCCTACACCTATGCGATAGCAAGTGCCGGAGCG
GCGTACGCGGTGACCGCCGCCTGTGCCCGCGGCAACATCTCCACCTGCGG
CTGTGATGTGCGGCACAAAGCCACGCCCACTGGCGGCGGTACGCCCGACG
AGCCCTGGAAGTGGGGCGGCTGCTCGGCGGACGTGGACTTTGGGATGCGG
TATGCGCGCAGATTCATGGATGCCCGCGAATTGGAGCGCGACTCCCGCAC
GCTGATGAACCTGCACAATAACCGAGCAGGGAGAACGCTGGTCAAGAAGA
TGCTGCGCACGGACTGCAAGTGCCATGGCGTCAGTGGCTCCTGCGTGATG
AAGACCTGCTGGAAGAGCCTGCCGCCCTTTCGACTGGTTGGCGATAGACT
CATGCTGAAGTATCAAAAAGCCAAAACTGTTCAAGCCGTCAAAGGCAAAC
GTGGACTGAGATTAGTATTAAGCAGAAAGAAGCATGCCGGCACCGCTCGT
GCCCAGAAACCGGTCCTCGATTGGCCGAAGCGCATGGAGCTGATCTACCT
GGAGGCGTCGCCCAACTACTGCGAGCGAAGTCTGCAGACGGGCAGCCAGG
GCACCTCAGGTCGGACCTGCCAGCGGACCGGCCACGGCCCCCAGAGCTGC
GATCTGCTCTGCTGTGGGCGTGGCCACAACACGCAGCACATTCGAAGGAC
CACGCAGTGCCGCTGCCAATTCCGCTGGTGCTGCGAGGTCAAGTGTGACG
AGTGCGACGAGAGCTACGAGGAGTTCACCTGTAAATAGACGGGTAGCGGG
AGCATATCGCTAGAACTAGGGCTATGTCATAGGAAATGCGTTGATTAAGT
ATTATGAGAAATGTATTACAACCGCAGATACGCACCGCGCCACCATACAG
ACACATTCCAGAATAAACGTAACAAGTTAACATCCCCAAAAAAAAAAAAA
AA

FI20276.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 13:51:39
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 5381657..5382741 1..1085 5410 99.9 Plus
chr2R 21145070 chr2R 5390205..5390670 1772..2237 2330 100 Plus
chr2R 21145070 chr2R 5389452..5389738 1301..1587 1435 100 Plus
chr2R 21145070 chr2R 5388851..5389070 1084..1303 1085 99.5 Plus
chr2R 21145070 chr2R 5389803..5389991 1587..1775 915 98.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 13:51:37
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 9494169..9495253 1..1085 5425 100 Plus
2R 25286936 2R 9502723..9503190 1772..2239 2340 100 Plus
2R 25286936 2R 9501970..9502256 1301..1587 1435 100 Plus
2R 25286936 2R 9501369..9501588 1084..1303 1100 100 Plus
2R 25286936 2R 9502321..9502509 1587..1775 945 100 Plus
Blast to na_te.dros performed on 2019-03-15 13:51:38 has no hits.

FI20276.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 13:52:48 Download gff for FI20276.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 5381657..5382011 1..355 100 == Plus
chr2R 5382064..5382741 408..1085 99 -> Plus
chr2R 5388853..5389070 1086..1303 99 -> Plus
chr2R 5389455..5389738 1304..1587 100 -> Plus
chr2R 5389804..5389991 1588..1775 98 -> Plus
chr2R 5390209..5390670 1776..2237 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-04-18 11:58:46 Download gff for FI20276.complete
Subject Subject Range Query Range Percent Splice Strand
Wnt2-RA 1..1059 1030..2088 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 22:14:11 Download gff for FI20276.complete
Subject Subject Range Query Range Percent Splice Strand
Wnt2-RA 1..1059 1030..2088 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:42:25 Download gff for FI20276.complete
Subject Subject Range Query Range Percent Splice Strand
Wnt2-RA 1..1059 1030..2088 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-18 11:58:46 Download gff for FI20276.complete
Subject Subject Range Query Range Percent Splice Strand
Wnt2-RA 1..2237 1..2237 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 22:14:11 Download gff for FI20276.complete
Subject Subject Range Query Range Percent Splice Strand
Wnt2-RA 4..2240 1..2237 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:42:25 Download gff for FI20276.complete
Subject Subject Range Query Range Percent Splice Strand
Wnt2-RA 4..2240 1..2237 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:52:48 Download gff for FI20276.complete
Subject Subject Range Query Range Percent Splice Strand
2R 9494169..9495253 1..1085 100 -> Plus
2R 9501371..9501588 1086..1303 100 -> Plus
2R 9501973..9502256 1304..1587 100 -> Plus
2R 9502322..9502509 1588..1775 100 -> Plus
2R 9502727..9503188 1776..2237 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:52:48 Download gff for FI20276.complete
Subject Subject Range Query Range Percent Splice Strand
2R 9494169..9495253 1..1085 100 -> Plus
2R 9501371..9501588 1086..1303 100 -> Plus
2R 9501973..9502256 1304..1587 100 -> Plus
2R 9502322..9502509 1588..1775 100 -> Plus
2R 9502727..9503188 1776..2237 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:52:48 Download gff for FI20276.complete
Subject Subject Range Query Range Percent Splice Strand
2R 9494169..9495253 1..1085 100 -> Plus
2R 9501371..9501588 1086..1303 100 -> Plus
2R 9501973..9502256 1304..1587 100 -> Plus
2R 9502322..9502509 1588..1775 100 -> Plus
2R 9502727..9503188 1776..2237 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 22:14:11 Download gff for FI20276.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 5389478..5389761 1304..1587 100 -> Plus
arm_2R 5389827..5390014 1588..1775 100 -> Plus
arm_2R 5381674..5382758 1..1085 100 -> Plus
arm_2R 5388876..5389093 1086..1303 100 -> Plus
arm_2R 5390232..5390693 1776..2237 100   Plus

FI20276.hyp Sequence

Translation from 1029 to 2087

> FI20276.hyp
MWKIHNKLLIYILWIMEIRLVSSFTSVMLCGRIPGLTPGQRNMCREMPDA
LIALGEGHQLGAQECQHQFRGHRWNCSEVWQRNVFAHVIPTASREAAYTY
AIASAGAAYAVTAACARGNISTCGCDVRHKATPTGGGTPDEPWKWGGCSA
DVDFGMRYARRFMDARELERDSRTLMNLHNNRAGRTLVKKMLRTDCKCHG
VSGSCVMKTCWKSLPPFRLVGDRLMLKYQKAKTVQAVKGKRGLRLVLSRK
KHAGTARAQKPVLDWPKRMELIYLEASPNYCERSLQTGSQGTSGRTCQRT
GHGPQSCDLLCCGRGHNTQHIRRTTQCRCQFRWCCEVKCDECDESYEEFT
CK*

FI20276.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:30:20
Subject Length Description Subject Range Query Range Score Percent Strand
Wnt2-PA 352 CG1916-PA 1..352 1..352 1949 100 Plus
Wnt2-PB 325 CG1916-PB 1..325 28..352 1809 100 Plus
Wnt10-PB 483 CG4971-PB 76..473 30..342 606 33.4 Plus
Wnt6-PC 420 CG4969-PC 218..419 139..351 488 39.5 Plus
Wnt6-PB 420 CG4969-PB 218..419 139..351 488 39.5 Plus
Wnt6-PC 420 CG4969-PC 63..141 57..139 163 41 Plus

FI20276.pep Sequence

Translation from 1029 to 2087

> FI20276.pep
MWKIHNKLLIYILWIMEIRLVSSFTSVMLCGRIPGLTPGQRNMCREMPDA
LIALGEGHQLGAQECQHQFRGHRWNCSEVWQRNVFAHVIPTASREAAYTY
AIASAGAAYAVTAACARGNISTCGCDVRHKATPTGGGTPDEPWKWGGCSA
DVDFGMRYARRFMDARELERDSRTLMNLHNNRAGRTLVKKMLRTDCKCHG
VSGSCVMKTCWKSLPPFRLVGDRLMLKYQKAKTVQAVKGKRGLRLVLSRK
KHAGTARAQKPVLDWPKRMELIYLEASPNYCERSLQTGSQGTSGRTCQRT
GHGPQSCDLLCCGRGHNTQHIRRTTQCRCQFRWCCEVKCDECDESYEEFT
CK*

FI20276.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:41:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF12469-PA 352 GF12469-PA 1..352 1..352 1676 92.3 Plus
Dana\GF15854-PA 424 GF15854-PA 17..407 30..335 505 33.2 Plus
Dana\GF15853-PA 444 GF15853-PA 242..443 139..351 477 41.4 Plus
Dana\wg-PA 456 GF15852-PA 68..273 40..236 452 42.7 Plus
Dana\GF14030-PA 544 GF14030-PA 225..544 14..352 430 31.8 Plus
Dana\wg-PA 456 GF15852-PA 344..455 240..351 210 36.6 Plus
Dana\GF15853-PA 444 GF15853-PA 88..158 57..129 153 41.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:41:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG24078-PA 352 GG24078-PA 1..352 1..352 1871 98 Plus
Dere\GG10469-PA 407 GG10469-PA 205..406 139..351 458 39.5 Plus
Dere\wg-PA 468 GG10467-PA 68..278 40..241 453 41.7 Plus
Dere\GG23540-PA 549 GG23540-PA 230..549 14..352 418 32.1 Plus
Dere\GG10471-PA 553 GG10471-PA 213..537 94..336 401 32.9 Plus
Dere\wg-PA 468 GG10467-PA 375..467 259..351 211 41.9 Plus
Dere\GG10469-PA 407 GG10469-PA 47..126 56..139 156 40.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:41:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH19925-PA 345 GH19925-PA 1..345 1..352 1529 84.9 Plus
Dgri\GH13726-PA 460 GH13726-PA 61..443 30..335 519 34.2 Plus
Dgri\GH13725-PA 375 GH13725-PA 173..374 139..351 469 40.5 Plus
Dgri\GH13724-PA 472 GH13724-PA 67..277 40..241 449 41.2 Plus
Dgri\GH13151-PA 543 GH13151-PA 221..543 11..352 417 32 Plus
Dgri\GH13724-PA 472 GH13724-PA 379..471 259..351 220 44.1 Plus
Dgri\GH13725-PA 375 GH13725-PA 1..107 29..139 169 36 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:15:19
Subject Length Description Subject Range Query Range Score Percent Strand
Wnt2-PA 352 CG1916-PA 1..352 1..352 1949 100 Plus
Wnt2-PB 325 CG1916-PB 1..325 28..352 1809 100 Plus
Wnt10-PB 483 CG4971-PB 76..473 30..342 606 33.4 Plus
Wnt6-PC 420 CG4969-PC 218..419 139..351 488 39.5 Plus
Wnt6-PB 420 CG4969-PB 218..419 139..351 488 39.5 Plus
Wnt4-PB 539 CG4698-PB 220..539 14..352 472 32.1 Plus
Wnt4-PA 539 CG4698-PA 220..539 14..352 472 32.1 Plus
wg-PA 468 CG4889-PA 68..278 40..241 466 41.2 Plus
Wnt5-PB 1004 CG6407-PB 838..1004 172..352 414 44.8 Plus
Wnt5-PA 1004 CG6407-PA 838..1004 172..352 414 44.8 Plus
wntD-PA 309 CG8458-PA 41..308 55..351 273 27.3 Plus
wg-PA 468 CG4889-PA 355..467 239..351 236 37.2 Plus
Wnt5-PB 1004 CG6407-PB 548..687 30..174 235 31.8 Plus
Wnt5-PA 1004 CG6407-PA 548..687 30..174 235 31.8 Plus
Wnt6-PC 420 CG4969-PC 63..141 57..139 163 41 Plus
Wnt6-PB 420 CG4969-PB 63..141 57..139 163 41 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:41:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI19882-PA 344 GI19882-PA 1..344 1..352 1526 84.9 Plus
Dmoj\GI23686-PA 308 GI23686-PA 17..298 88..342 490 38.2 Plus
Dmoj\GI23666-PA 427 GI23666-PA 225..426 139..351 467 40.9 Plus
Dmoj\GI23655-PA 473 GI23655-PA 67..277 40..241 451 41.7 Plus
Dmoj\GI17793-PA 562 GI17793-PA 243..562 14..352 426 31.2 Plus
Dmoj\GI23655-PA 473 GI23655-PA 380..472 259..351 221 44.1 Plus
Dmoj\GI23666-PA 427 GI23666-PA 49..156 28..139 166 34.8 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:41:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL17355-PA 317 GL17355-PA 1..317 1..321 1119 72.6 Plus
Dper\GL18902-PA 460 GL18902-PA 53..443 30..335 510 33.2 Plus
Dper\GL18900-PA 402 GL18900-PA 20..401 28..351 484 31 Plus
Dper\GL18899-PA 468 GL18899-PA 68..278 40..241 454 41.7 Plus
Dper\GL19231-PA 530 GL19231-PA 211..530 14..352 424 32.1 Plus
Dper\GL18899-PA 468 GL18899-PA 375..467 259..351 208 40.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:41:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA24226-PA 353 GA24226-PA 1..353 1..352 1566 86.4 Plus
Dpse\GA18562-PA 489 GA18562-PA 82..472 30..335 511 33.2 Plus
Dpse\GA18561-PA 395 GA18561-PA 13..394 28..351 485 31 Plus
Dpse\wg-PA 468 GA18504-PA 68..278 40..241 454 41.7 Plus
Dpse\GA25881-PA 534 GA25881-PA 215..534 14..352 424 32.1 Plus
Dpse\wg-PA 468 GA18504-PA 375..467 259..351 208 40.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:41:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM21127-PA 352 GM21127-PA 1..352 1..352 1891 99.7 Plus
Dsec\GM16392-PA 480 GM16392-PA 73..464 30..336 506 33.2 Plus
Dsec\GM16377-PA 338 GM16377-PA 136..337 139..351 461 39.5 Plus
Dsec\GM16366-PA 468 GM16366-PA 68..312 40..275 454 39 Plus
Dsec\GM13583-PA 539 GM13583-PA 220..539 14..352 403 31.5 Plus
Dsec\GM16366-PA 468 GM16366-PA 375..467 259..351 211 41.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:41:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD10659-PA 324 GD10659-PA 1..324 1..352 1395 79 Plus
Dsim\GD23462-PA 481 GD23462-PA 74..464 30..335 507 33.2 Plus
Dsim\wg-PA 447 GD23460-PA 245..446 139..351 455 39.5 Plus
Dsim\GD22501-PA 539 GD22501-PA 220..539 14..352 416 32.1 Plus
Dsim\GD15629-PA 969 GD15629-PA 803..969 172..352 389 45.3 Plus
Dsim\GD15629-PA 969 GD15629-PA 549..683 35..174 230 32.2 Plus
Dsim\wg-PA 447 GD23460-PA 68..168 40..139 204 42.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:41:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ15051-PA 343 GJ15051-PA 1..343 1..352 1505 83.5 Plus
Dvir\GJ20870-PA 449 GJ20870-PA 50..439 30..342 557 35.1 Plus
Dvir\GJ20859-PA 399 GJ20859-PA 197..398 139..351 460 40.5 Plus
Dvir\wg-PA 472 GJ20848-PA 67..277 40..241 449 41.2 Plus
Dvir\GJ17616-PA 548 GJ17616-PA 228..548 11..352 418 30.9 Plus
Dvir\wg-PA 472 GJ20848-PA 379..471 259..351 220 44.1 Plus
Dvir\GJ20859-PA 399 GJ20859-PA 17..124 28..139 168 34.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:41:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK15749-PA 356 GK15749-PA 1..356 1..352 1438 79.8 Plus
Dwil\GK24728-PA 547 GK24728-PA 228..547 14..352 459 32.9 Plus
Dwil\wg-PA 477 GK24298-PA 68..299 40..258 454 39.2 Plus
Dwil\GK24297-PA 308 GK24297-PA 111..307 139..351 442 40 Plus
Dwil\GK24299-PA 457 GK24299-PA 41..312 30..264 390 35.3 Plus
Dwil\wg-PA 477 GK24298-PA 334..476 219..351 218 33.6 Plus
Dwil\GK24299-PA 457 GK24299-PA 376..440 271..335 187 52.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:41:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE19281-PA 352 GE19281-PA 1..352 1..352 1882 98.9 Plus
Dyak\GE14461-PA 366 GE14461-PA 164..365 139..351 461 39.5 Plus
Dyak\GE18366-PA 550 GE18366-PA 231..550 14..352 418 32.1 Plus
Dyak\GE15518-PA 1003 GE15518-PA 837..1003 172..352 394 45.9 Plus
Dyak\GE14471-PA 314 GE14471-PA 56..297 143..335 392 38 Plus
Dyak\GE15518-PA 1003 GE15518-PA 552..686 35..174 229 32.2 Plus