Clone FI20291 Report

Search the DGRC for FI20291

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:202
Well:91
Vector:pFlc-1
Associated Gene/Transcripthth-RE
Protein status:FI20291.pep: gold
Sequenced Size:2979

Clone Sequence Records

FI20291.complete Sequence

2979 bp assembled on 2012-08-16

GenBank Submission: BT149862.1

> FI20291.complete
GATATCTTTGAGACACTGGCGGTGGATTGGTAAATTGATTGTAACGTAGT
ATGTAGAAGCAGCTGTGATAAATAGTGCGCATATTATACGAAAAAAGCAA
AAAGAGTATACGACAAACAAATAAAAATTAAAAGCAACCACAACTACTAC
TATAAAAATAACCAAGGAAAAGGCAAGGAAACTCGCAAAACGAGAGAGAG
AGGAAAAGGGAAAAAACGCCATGGATTTATGACAACAACAAATGCAACCC
AGTAACAAATGATGTTGCAGCAACTACTACAATACACGAGTATACCAAGA
ACATCAACAACAACAACTGCAACGGCAACCAACAACAAATTGTATACGAT
TTTTATAAACCAAACAAATGCTATGTAAATAATTATTATAACAAACACAC
AAGTAAAAAAAACATTCAAAACCAGATCTCCCGCTCTAGAAAACAAACAA
CAAACGCGCGCGTAACAAAAACGACAACATCAACAATACAACAAGTATAC
AAACGTAATAATAATACATAAAATCTAAACAAATGTGCCTGTGTTAAAAA
AAAAGAAAGCAAAATCAAGAAGCAAAGCGTTCAAGAAGCAAAGGCTTCCC
AATACATGAAAAAAGTGCAAAACATATATAAAAATCCAAGAAAATAACAT
CCAAAACTGAAGAACTGGAAAAGCCAAGAGTAAATCTAAGGACTCCACAC
GGGCAGCTACAGTAGAGCTTCCCTAAAACCGAAGCAGTTGCAGCGGCGGA
GCGGGACGTCGGTCAGTGTGTTGCGCCCCCATTTGTTGTTCCTACTGTAA
AAAGTGGCACAAATCGGGTTAGACGTCGCTCCCAGAGCATTAATGGCTCA
GCCCAGGTATGACGATGGCCTACACGGCTACGGCATGGACTCCGGAGCCG
CAGCAGCGGCCATGTACGATCCACACGCCGGTCACCGGCCGCCCGGACTG
CAGGGCCTCCCCTCGCACCACTCTCCGCACATGACGCACGCAGCGGCGGC
GGCGGCCACAGTGGGCATGCACGGCTACCATTCGGGGGCCGGGGGTCATG
GAACACCTAGTCATGTATCGCCGGTCGGTAATCACCTAATGGGCGCAATA
CCCGAAGTACACAAACGTGATAAGGATGCGATTTATGAACATCCGCTATT
CCCGCTTTTGGCGCTGATCTTTGAGAAGTGCGAATTGGCCACATGTACGC
CGAGGGAGCCCGGTGTGCAAGGTGGCGATGTCTGTTCGTCGGAATCGTTC
AACGAGGATATTGCAATGTTCAGTAAACAGATAAGATCACAGAAACCCTA
TTATACCGCAGATCCCGAAGTCGACTCACTGATGGTGCAAGCAATACAAG
TACTTCGGTTTCACCTTTTAGAATTAGAAAAAGTACACGAGTTATGCGAT
AACTTCTGTCATCGGTATATATCGTGTTTAAAGGGTAAAATGCCAATAGA
TTTAGTGATCGACGAACGGGACACCACCAAACCACCGGAGTTGGGATCGG
CGAACGGAGAAGGGCGCAGCAACGCCGACTCCACATCGCACACCGATGGA
GCTAGTACACCAGACGTTCCCAGCACCCAAGACTTTTCACCGCTGGAGGA
GACCTATGCCAGCTATCGCATCAAACACGAGGCGGACTTTTAGTCCGGCC
CGACTTTTCCCCTTCGACCCCCTCAGCAGTTCTCTATGAATATACTGAAA
ATCGATCTAATATAGAGATAACGCTTAGCCATGTAGTTTGTAACTAAAGT
CAAGTCTAGGCTGCGCTTAAAAGAATTCACTCGCAAGTAAAAGAGAGAGG
AGCAAACGCTAAAAGTATAGTTAATTCCTAGAAACTTTCTAAACATATTT
TCTATGCTTAGTTTTCAATTTTTTTTTTCCTATATGTTTTCGGGAATTTT
TCACTTTAGCAAACGTGTATACGATTTTTCAAAAACAAAACGTCCTTTTT
CCCTCCTCGTGTTTTACAACACTGGAGCGAACTTGCCAAATAATTAATAA
TCAATAATCGCAAAAAAAAACGCTAAATGAGAATATTAACTATTTTCGTT
AATCTTTTTTGTTTAACTCTGAACATGCAACGCATATACGTAAAAGAGAT
ACCAGAAAAGAAACACCAACCTGAGTTCAAATGCAAAGTATACGAATAAA
ACTTTATTGTTTATTAAATAATGAAAATGGAAATCGAAACAAAAACTTAA
AGTTAATTTAATTAATTGAGGATTGCAATGCGCCTATACGAACGACATTT
TAAATGAGCCGATACCCTTCAAGAACAATGATATACGTAAATCAACAGCA
ACAACTAAAAACTAAACAAACTTTTAGCATTTACTAAAGCAAATCGAAAA
CTACGCGATACTACTATTATAAAATAAACATAAAAGGAGAAAGCTAATGT
AATTTAATTGAATTAGGGAGCCGTGGAGAAACTTAGAGATCCCACGCTCT
CCTCCCCCAATTGTATACTATAGCGTACGTTATATAGTTCTTAGTCAGGC
CCCAAAATCCCCAATTTACCAACCCCCCCCCCCCCTTTGGAGTTGTATGC
TAGGCGAACCCCTAAGCTTGCAAGCGAAACTCAAAGATACGAAAATCGTA
AGCAGCAAACCCCTCTTCTAGCTACCAAAACCAACCAACAGAACACTTTC
TACTGCTAATTTCTACTACTATTTTGAGTTGTAGACCTACTAAACCAACA
AAACTACAAAAAAAATGTACTTAAATCGAACTGCGAACAGTCGATCGCAG
TTCTTCAGCTATATGGGCAGTCATTTGTATACTTAGACTATAGTCGAACC
GATTCCCAGCGGTTTATTATAGCCAACTAACTAAAAAACAACAACAACGT
GAAAAGCTTTTGTACTATTTTTTCAAAACTACAAAACGAAAACTTCTTGC
AAAACTATAAAAAAAATTTGCAACAAAAAAATTAAAATAGTTGTTGTACT
TTGTCTCAAACCCAAAAAAAAAAACAAAA

FI20291.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 14:01:02
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 6408100..6409503 2973..1569 6700 99.1 Minus
chr3R 27901430 chr3R 6438547..6439363 857..41 4025 99.5 Minus
chr3R 27901430 chr3R 6430662..6430943 1138..857 1410 100 Minus
chr3R 27901430 chr3R 6411372..6411557 1568..1383 930 100 Minus
chr3R 27901430 chr3R 6428364..6428511 1286..1139 725 99.3 Minus
chr3R 27901430 chr3R 6417026..6417080 1385..1331 275 100 Minus
chr3R 27901430 chr3R 6419163..6419216 1331..1278 270 100 Minus
chr3R 27901430 chr3R 6464165..6464205 41..1 190 97.6 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 14:01:00
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 10582468..10583873 2973..1569 6950 99.8 Minus
3R 32079331 3R 10612985..10613801 857..41 4070 99.9 Minus
3R 32079331 3R 10605088..10605369 1138..857 1410 100 Minus
3R 32079331 3R 10585743..10585928 1568..1383 930 100 Minus
3R 32079331 3R 10602786..10602933 1286..1139 725 99.3 Minus
3R 32079331 3R 10591406..10591460 1385..1331 275 100 Minus
3R 32079331 3R 10593551..10593604 1331..1278 270 100 Minus
3R 32079331 3R 10638624..10638664 41..1 205 100 Minus
Blast to na_te.dros performed 2019-03-15 14:01:01
Subject Length Description Subject Range Query Range Score Percent Strand
297 6995 297 DMIS297 6995bp Derived from X03431 (g8146) (Rel. 36, Last updated, Version 2). 531..788 2126..2392 143 52.8 Plus
Max-element 8556 Max-element DME487856 8556bp Derived from AJ487856 (Rel. 71, Last updated, Version 1). 1033..1091 2217..2156 140 74.2 Minus
17.6 7439 17.6 DMIS176 7439bp AKA(J01060,J01061) Derived from X01472 (g8142) (Rel. 36, Last updated, Version 2). 806..1030 2105..2320 138 58.3 Plus
roo 9092 roo DM_ROO 9092bp 8282..8389 2250..2146 128 59.3 Minus
HeT-A 6083 HeT-A DM06920 6083bp Derived from U06920.2 (Rel. 67, Last updated, Version 14). 301..391 2231..2145 121 62.6 Minus

FI20291.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 14:02:04 Download gff for FI20291.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 6428370..6428511 1139..1280 100 <- Minus
chr3R 6408110..6409503 1569..2963 99 <- Minus
chr3R 6411372..6411557 1383..1568 100 <- Minus
chr3R 6417029..6417079 1332..1382 100 <- Minus
chr3R 6419163..6419213 1281..1331 100 <- Minus
chr3R 6430662..6430942 858..1138 100 <- Minus
chr3R 6438547..6439065 339..857 99 == Minus
chr3R 6439137..6439362 42..267 99 <- Minus
chr3R 6464165..6464205 1..41 97   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-08-16 11:47:02 Download gff for FI20291.complete
Subject Subject Range Query Range Percent Splice Strand
hth-RE 1..801 843..1643 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 00:14:30 Download gff for FI20291.complete
Subject Subject Range Query Range Percent Splice Strand
hth-RE 1..801 843..1643 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:49:02 Download gff for FI20291.complete
Subject Subject Range Query Range Percent Splice Strand
hth-RE 1..801 843..1643 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-08-16 11:47:01 Download gff for FI20291.complete
Subject Subject Range Query Range Percent Splice Strand
hth-RE 1..2964 1..2963 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:14:30 Download gff for FI20291.complete
Subject Subject Range Query Range Percent Splice Strand
hth-RE 905..3868 1..2963 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:49:02 Download gff for FI20291.complete
Subject Subject Range Query Range Percent Splice Strand
hth-RE 905..3868 1..2963 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:02:04 Download gff for FI20291.complete
Subject Subject Range Query Range Percent Splice Strand
3R 10602792..10602933 1139..1280 100 <- Minus
3R 10585743..10585928 1383..1568 100 <- Minus
3R 10582478..10583873 1569..2963 99 <- Minus
3R 10591409..10591459 1332..1382 100 <- Minus
3R 10593551..10593601 1281..1331 100 <- Minus
3R 10605088..10605368 858..1138 100 <- Minus
3R 10612985..10613800 42..857 99 <- Minus
3R 10638624..10638664 1..41 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:02:04 Download gff for FI20291.complete
Subject Subject Range Query Range Percent Splice Strand
3R 10602792..10602933 1139..1280 100 <- Minus
3R 10585743..10585928 1383..1568 100 <- Minus
3R 10582478..10583873 1569..2963 99 <- Minus
3R 10591409..10591459 1332..1382 100 <- Minus
3R 10593551..10593601 1281..1331 100 <- Minus
3R 10605088..10605368 858..1138 100 <- Minus
3R 10612985..10613800 42..857 99 <- Minus
3R 10638624..10638664 1..41 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:02:04 Download gff for FI20291.complete
Subject Subject Range Query Range Percent Splice Strand
3R 10602792..10602933 1139..1280 100 <- Minus
3R 10585743..10585928 1383..1568 100 <- Minus
3R 10582478..10583873 1569..2963 99 <- Minus
3R 10591409..10591459 1332..1382 100 <- Minus
3R 10593551..10593601 1281..1331 100 <- Minus
3R 10605088..10605368 858..1138 100 <- Minus
3R 10612985..10613800 42..857 99 <- Minus
3R 10638624..10638664 1..41 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:14:30 Download gff for FI20291.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 6408200..6409595 1569..2963 99 <- Minus
arm_3R 6411465..6411650 1383..1568 100 <- Minus
arm_3R 6417131..6417181 1332..1382 100 <- Minus
arm_3R 6419273..6419323 1281..1331 100 <- Minus
arm_3R 6428514..6428655 1139..1280 100 <- Minus
arm_3R 6430810..6431090 858..1138 100 <- Minus
arm_3R 6438707..6439522 42..857 99 <- Minus
arm_3R 6464346..6464386 1..41 100   Minus

FI20291.pep Sequence

Translation from 842 to 1642

> FI20291.pep
MAQPRYDDGLHGYGMDSGAAAAAMYDPHAGHRPPGLQGLPSHHSPHMTHA
AAAAATVGMHGYHSGAGGHGTPSHVSPVGNHLMGAIPEVHKRDKDAIYEH
PLFPLLALIFEKCELATCTPREPGVQGGDVCSSESFNEDIAMFSKQIRSQ
KPYYTADPEVDSLMVQAIQVLRFHLLELEKVHELCDNFCHRYISCLKGKM
PIDLVIDERDTTKPPELGSANGEGRSNADSTSHTDGASTPDVPSTQDFSP
LEETYASYRIKHEADF*

FI20291.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 12:05:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF17520-PA 487 GF17520-PA 1..242 1..242 1296 100 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 12:05:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG17283-PA 487 GG17283-PA 1..242 1..242 1296 100 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 12:05:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH19106-PA 456 GH19106-PA 1..227 15..242 1182 97.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:35:35
Subject Length Description Subject Range Query Range Score Percent Strand
hth-PE 266 CG17117-PE 1..266 1..266 1440 100 Plus
hth-PI 266 CG17117-PI 1..245 1..245 1319 99.6 Plus
hth-PF 266 CG17117-PF 1..245 1..245 1319 99.6 Plus
hth-PA 472 CG17117-PA 1..242 1..242 1312 100 Plus
hth-PC 487 CG17117-PC 1..242 1..242 1312 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 12:05:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI23559-PA 472 GI23559-PA 1..227 15..242 1188 98.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 12:05:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL23827-PA 266 GL23827-PA 1..266 1..266 1408 99.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 12:05:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA14330-PF 266 GA14330-PF 1..266 1..266 1417 100 Plus
Dpse\GA14330-PG 471 GA14330-PG 1..242 1..242 1296 100 Plus
Dpse\GA14330-PB 471 GA14330-PB 1..242 1..242 1296 100 Plus
Dpse\GA14330-PC 487 GA14330-PC 1..242 1..242 1296 100 Plus
Dpse\GA14330-PE 266 GA14330-PE 1..245 1..245 1295 99.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 12:05:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM26167-PA 487 GM26167-PA 1..242 1..242 1296 100 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 12:05:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD20718-PA 487 GD20718-PA 1..242 1..242 1296 100 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 12:05:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ23538-PA 470 GJ23538-PA 1..241 1..242 1266 98.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 12:05:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK22581-PA 486 GK22581-PA 1..241 1..242 1270 98.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 12:05:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE24684-PA 487 GE24684-PA 1..242 1..242 1296 100 Plus

FI20291.hyp Sequence

Translation from 842 to 1642

> FI20291.hyp
MAQPRYDDGLHGYGMDSGAAAAAMYDPHAGHRPPGLQGLPSHHSPHMTHA
AAAAATVGMHGYHSGAGGHGTPSHVSPVGNHLMGAIPEVHKRDKDAIYEH
PLFPLLALIFEKCELATCTPREPGVQGGDVCSSESFNEDIAMFSKQIRSQ
KPYYTADPEVDSLMVQAIQVLRFHLLELEKVHELCDNFCHRYISCLKGKM
PIDLVIDERDTTKPPELGSANGEGRSNADSTSHTDGASTPDVPSTQDFSP
LEETYASYRIKHEADF*

FI20291.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:36:08
Subject Length Description Subject Range Query Range Score Percent Strand
hth-PE 266 CG17117-PE 1..266 1..266 1440 100 Plus
hth-PI 266 CG17117-PI 1..245 1..245 1319 99.6 Plus
hth-PF 266 CG17117-PF 1..245 1..245 1319 99.6 Plus
hth-PA 472 CG17117-PA 1..242 1..242 1312 100 Plus
hth-PC 487 CG17117-PC 1..242 1..242 1312 100 Plus