Clone FI20425 Report

Search the DGRC for FI20425

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:204
Well:25
Vector:pOTB7
Associated Gene/TranscriptCG13442-RA
Protein status:FI20425.pep: gold
Sequenced Size:1664

Clone Sequence Records

FI20425.complete Sequence

1664 bp assembled on 2012-10-17

GenBank Submission: BT149865.1

> FI20425.complete
CAAAACAAAAGAATAGCAAAAGCTACTTCAATATTATACAAAAGATGTAT
TAAAATTTTTGGTTAATTTCGGTACCCCATTATTCAAAAACCGTCGAACC
GATCAAAGAATGGAGTGCGAAAAATGTGATATCACCAGCAATGCCGGTGA
CCATAGGCTTAATTTGACACGGAGTCTGTCGGACCTTAAACCGGAAACCA
CTCTGGAGATGGAGATTGATGAGGCTCTGTCCTCCAGTAGTGCCGATGAC
ACTCCGCCGGGCATGATCGTTGTGGAGACCCGCATCAGTTCCTGGCAGAA
GGTGAAGTGCTATGACAAGGATGGTACGACAGCAGATGCGGAGGATCCAC
AGATACCGGCCTGCTCCCTGGGCCTAAAGCCAAATGTTCAGTTCCAGAAG
CTACCGCACCCAAGTCATCCTCTGGTCAGCACCGAGGCCGTCCTGGCCGC
CGCCACCAGCTCCTCCTATTCCGCTGGCCCACCCAAAGCCGCGGCCACAG
ACTCCATTGCCACGTTGCGGCACTGCGTCGATGGTGCCACCCAGTGCAAT
AACCTGAATTACGAGTCCGCATCCAACGAATCGATGCCCTCGGTGGGATC
GCTCGTCTGTCGCATTTGTCACAATGCCGATAATCCCGAACAACTCGTGT
CGCCGTGTTTGTGCAAGGGCTCGCTGACATATGTCCATGTTCACTGCCTG
GAGTGTTGGATTAGCACCTCGCGCTGCACCACCTGCGAGCTGTGCCAGTT
CCAGTACAATACGGAACAGACTCTGCGGTACACCTGCCTGCAGTCGCTGC
GCCTGTGGTACTCAAGGGCCATGAGTCGCAGGGCACTGCAGGAGGACTGC
CAGATGTTCTCGCTGCTCACCTTGGTGGCATTCGGAATTATCGGTACCCT
GCTGGTAGGCATCCAGTACTACGCCCTGCACACCCACTCTTGGGGACTGA
GTAAGCTGTGGACCAAGTCCTGGATGCTGTTCTTCCTGTTCATGACGATC
ACCGTTTACTTTGCTAACATTTACATGCTGATCAAGTCCCAGCTGACGCC
ATGGTATCGCTGGTGGCAATCTGCGCGTGACATTAAACTTATCCTGGAGA
ACCGACGACCGTTTCCGAACCCAAGCCGCTTTTTGCGGTCATTTCAATTG
GAGACGGTATCGACGACAGCCTCCATGTACACCCACCACGATCAGCAGGA
AGCACCAGTGCCCAGCTCCTCGCCGGTCATCGTGATCACCTCCAGCGAGG
AGGAGACGGAGGATAAGTTGGCCCACAAATGGGGAACGCGGCTGGACAGT
GAAGTGCTGGCCGCAGTAGTGGCAGCCACAGTGGAATCGATTGCTGACGC
AAGTGCCCGAGAGAGTGACAAACAGGACGAGGACTAGCAACAGCATTCAG
TTGCAACAGCAACAACGACAACCGGATGGCAGTAACTAAAGTACTGGACT
GGGTCTCGAGGGGAACAGGACGGATAGCATGATAGCAAAGGTCTGGGCAA
GTAATTAAGACTCAAGGGCAAGGATTTTGCTGGGCTTTCGTTGTTTGAGT
GTCATTTGTTTAATGTAGTTTCAATGACTTAAATTAACTTACTCTCTCTC
GCGATGAGAGCTCGAAATAAATGGGTAAAATTGAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAA

FI20425.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 14:01:42
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 16614503..16615077 1633..1059 2725 98.3 Minus
chr2R 21145070 chr2R 16616587..16617101 642..128 2575 100 Minus
chr2R 21145070 chr2R 16615251..16615471 997..777 1105 100 Minus
chr2R 21145070 chr2R 16615846..16615983 780..643 690 100 Minus
chr2R 21145070 chr2R 16617157..16617284 128..1 640 100 Minus
chr2R 21145070 chr2R 16615141..16615203 1059..997 315 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 14:01:40
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 20727828..20728403 1634..1059 2775 98.8 Minus
2R 25286936 2R 20729913..20730427 642..128 2575 100 Minus
2R 25286936 2R 20728577..20728797 997..777 1105 100 Minus
2R 25286936 2R 20729172..20729309 780..643 690 100 Minus
2R 25286936 2R 20730483..20730610 128..1 640 100 Minus
2R 25286936 2R 20728467..20728529 1059..997 315 100 Minus
Blast to na_te.dros performed on 2019-03-15 14:01:41 has no hits.

FI20425.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 14:02:25 Download gff for FI20425.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 16614503..16615076 1060..1633 98 <- Minus
chr2R 16615141..16615202 998..1059 100 <- Minus
chr2R 16615251..16615470 778..997 100 <- Minus
chr2R 16615849..16615983 643..777 100 <- Minus
chr2R 16616587..16617100 129..642 100 <- Minus
chr2R 16617157..16617284 1..128 100   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-10-17 19:12:05 Download gff for FI20425.complete
Subject Subject Range Query Range Percent Splice Strand
CG13442-RA 1..1278 110..1387 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 00:15:15 Download gff for FI20425.complete
Subject Subject Range Query Range Percent Splice Strand
CG13442-RA 1..1278 110..1387 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:47:11 Download gff for FI20425.complete
Subject Subject Range Query Range Percent Splice Strand
CG13442-RA 1..1278 110..1387 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-17 19:12:04 Download gff for FI20425.complete
Subject Subject Range Query Range Percent Splice Strand
CG13442-RA 1..1633 1..1633 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:15:15 Download gff for FI20425.complete
Subject Subject Range Query Range Percent Splice Strand
CG13442-RA 1..1633 1..1633 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:47:11 Download gff for FI20425.complete
Subject Subject Range Query Range Percent Splice Strand
CG13442-RA 1..1633 1..1633 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:02:25 Download gff for FI20425.complete
Subject Subject Range Query Range Percent Splice Strand
2R 20729175..20729309 643..777 100 <- Minus
2R 20727829..20728402 1060..1633 98 <- Minus
2R 20728467..20728528 998..1059 100 <- Minus
2R 20728577..20728796 778..997 100 <- Minus
2R 20729913..20730426 129..642 100 <- Minus
2R 20730483..20730610 1..128 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:02:25 Download gff for FI20425.complete
Subject Subject Range Query Range Percent Splice Strand
2R 20729175..20729309 643..777 100 <- Minus
2R 20727829..20728402 1060..1633 98 <- Minus
2R 20728467..20728528 998..1059 100 <- Minus
2R 20728577..20728796 778..997 100 <- Minus
2R 20729913..20730426 129..642 100 <- Minus
2R 20730483..20730610 1..128 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:02:25 Download gff for FI20425.complete
Subject Subject Range Query Range Percent Splice Strand
2R 20729175..20729309 643..777 100 <- Minus
2R 20727829..20728402 1060..1633 98 <- Minus
2R 20728467..20728528 998..1059 100 <- Minus
2R 20728577..20728796 778..997 100 <- Minus
2R 20729913..20730426 129..642 100 <- Minus
2R 20730483..20730610 1..128 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:15:15 Download gff for FI20425.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 16617988..16618115 1..128 100   Minus
arm_2R 16615334..16615907 1060..1633 98 <- Minus
arm_2R 16615972..16616033 998..1059 100 <- Minus
arm_2R 16616082..16616301 778..997 100 <- Minus
arm_2R 16616680..16616814 643..777 100 <- Minus
arm_2R 16617418..16617931 129..642 100 <- Minus

FI20425.hyp Sequence

Translation from 109 to 1386

> FI20425.hyp
MECEKCDITSNAGDHRLNLTRSLSDLKPETTLEMEIDEALSSSSADDTPP
GMIVVETRISSWQKVKCYDKDGTTADAEDPQIPACSLGLKPNVQFQKLPH
PSHPLVSTEAVLAAATSSSYSAGPPKAAATDSIATLRHCVDGATQCNNLN
YESASNESMPSVGSLVCRICHNADNPEQLVSPCLCKGSLTYVHVHCLECW
ISTSRCTTCELCQFQYNTEQTLRYTCLQSLRLWYSRAMSRRALQEDCQMF
SLLTLVAFGIIGTLLVGIQYYALHTHSWGLSKLWTKSWMLFFLFMTITVY
FANIYMLIKSQLTPWYRWWQSARDIKLILENRRPFPNPSRFLRSFQLETV
STTASMYTHHDQQEAPVPSSSPVIVITSSEEETEDKLAHKWGTRLDSEVL
AAVVAATVESIADASARESDKQDED*

FI20425.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:36:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG13442-PA 425 CG13442-PA 1..425 1..425 2249 100 Plus
CG4080-PB 617 CG4080-PB 25..239 148..379 192 26.9 Plus
CG4080-PA 617 CG4080-PA 25..239 148..379 192 26.9 Plus

FI20425.pep Sequence

Translation from 109 to 1386

> FI20425.pep
MECEKCDITSNAGDHRLNLTRSLSDLKPETTLEMEIDEALSSSSADDTPP
GMIVVETRISSWQKVKCYDKDGTTADAEDPQIPACSLGLKPNVQFQKLPH
PSHPLVSTEAVLAAATSSSYSAGPPKAAATDSIATLRHCVDGATQCNNLN
YESASNESMPSVGSLVCRICHNADNPEQLVSPCLCKGSLTYVHVHCLECW
ISTSRCTTCELCQFQYNTEQTLRYTCLQSLRLWYSRAMSRRALQEDCQMF
SLLTLVAFGIIGTLLVGIQYYALHTHSWGLSKLWTKSWMLFFLFMTITVY
FANIYMLIKSQLTPWYRWWQSARDIKLILENRRPFPNPSRFLRSFQLETV
STTASMYTHHDQQEAPVPSSSPVIVITSSEEETEDKLAHKWGTRLDSEVL
AAVVAATVESIADASARESDKQDED*

FI20425.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 12:06:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF12746-PA 453 GF12746-PA 1..432 1..424 1565 78.1 Plus
Dana\GF23737-PA 608 GF23737-PA 25..199 148..331 189 29 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 12:06:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG20834-PA 444 GG20834-PA 1..422 1..421 1943 91.5 Plus
Dere\GG14045-PA 620 GG14045-PA 25..199 148..331 189 29 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 12:06:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH19885-PA 390 GH19885-PA 20..315 88..387 977 64.2 Plus
Dgri\GH16861-PA 674 GH16861-PA 28..202 148..331 177 28.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:53:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG13442-PA 425 CG13442-PA 1..425 1..425 2249 100 Plus
CG4080-PB 617 CG4080-PB 25..239 148..379 192 26.9 Plus
CG4080-PA 617 CG4080-PA 25..239 148..379 192 26.9 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 12:06:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI19841-PA 486 GI19841-PA 18..378 26..370 1274 71 Plus
Dmoj\GI13084-PA 636 GI13084-PA 28..202 148..331 181 28.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 12:06:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL17428-PA 446 GL17428-PA 1..425 1..422 1273 63.8 Plus
Dper\GL22630-PA 614 GL22630-PA 26..200 148..331 187 29 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 12:06:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA12291-PA 431 GA12291-PA 1..412 1..424 1331 66 Plus
Dpse\GA17942-PA 614 GA17942-PA 26..200 148..331 187 29 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 12:06:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM19764-PA 425 GM19764-PA 1..425 1..425 2230 97.6 Plus
Dsec\GM24879-PA 621 GM24879-PA 25..199 148..331 188 29 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 12:06:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD25254-PA 421 GD25254-PA 1..421 1..425 2173 96.2 Plus
Dsim\GD12929-PA 206 GD12929-PA 25..198 148..328 166 29.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 12:06:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ18733-PA 502 GJ18733-PA 23..401 26..379 1286 68.5 Plus
Dvir\GJ13833-PA 634 GJ13833-PA 28..202 148..331 178 28.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 12:06:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK22887-PA 460 GK22887-PA 1..451 1..424 1424 66 Plus
Dwil\GK17579-PA 628 GK17579-PA 26..229 148..356 197 28.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 12:06:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE13773-PA 441 GE13773-PA 1..422 1..425 1963 88 Plus
Dyak\GE21248-PA 620 GE21248-PA 25..199 148..331 191 29 Plus