Clone FI20527 Report

Search the DGRC for FI20527

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:205
Well:27
Vector:pFlc-1
Associated Gene/TranscriptCG33303-RA
Protein status:FI20527.pep: gold
Sequenced Size:2757

Clone Sequence Records

FI20527.complete Sequence

2757 bp assembled on 2013-05-30

GenBank Submission: BT150109.1

> FI20527.complete
AACGGTTCGAGATTTTCCAATGTACGTGTCCAAATTTGAGGCGAGCATGG
CTACGAATTTTGTTATTTATCTGGCGCTTGGGGCACTCCTCTGCCTGGCC
ACTGCCAACGGGGAAATAGTGAACACAAATGTGGAGCGAACGCTGGACCT
AACATCGCAGCTGGTAAAGACGACCACCAAGATCTCGGCGGAAGATTCGG
CCGGCAAGCCGATTGTGGAATACGTGTTTTTCACATCGGAGCCCAGTTTG
GCGTACATTGACGTAAAAGATGCTAGCGACAAGAGTGTGCCATTCAAGCG
GAATGAGCCCGTGAAGGGGGAGCAGAGCTTCACGTTCACCTTCCCCAGGG
CCGCCGCCAAGCAGACGTTCATCGTCGAGACCGTGGCCTCTAAGGGCATC
CGCCCACATCCGGAGGAGATACGGCAGAACGACAAGCAGTTCGTGAAATA
TACGGGCAATCTGCACCTCTATTCCAAGTACAGGACCAACAGCCAGAAGA
CCAATGTCAAGCTCAGCTCCTCGAACATCTTGTCGCACACCCAGGTCAAA
CCCTTTTCGGTGTCCTCCAACAAGATCACCCTGGGACCCTACGAAAACGT
AGAGGCCTTCAGCCAGGAGCCACTAGTCATCCACTATGAGAACTCCGCAC
CATTCGTCACCGTCAATACGCTGGAACGCACGCTGGAGATATCGCATTGG
GGCAACATTGCCGTCCAGGAGTCTATTCAGATGACGCACACCGGGGCCAA
GCTGAAGGGCTCGTTCTCGCGCTACGATTTCCAGAAGGAAGGACGCTCCG
GACTGGCGGCCCTCAAGTCGTACAAGACCTACCTGCCAGCATCCGCATCT
GGTGTCTATTACCGCGACACCAATGGCAACATTTCCACCTCCAACATGAA
CGCCGTGCGCGACTTCATCGAGCTGGAGCTGCGTCCGCGCTTCCCGCTCT
TCGGCGGCTGGAAAACGCAATACACTCTGGGCTACAATGTGCCCTCGTAC
GAGTACATGTTCAACGATGGCAACAAGTACCAGCTGAAGATGCACCTCAT
CGATCACATCTACGACAATATGGCCATCGATGAGGCCACCATCAAGATTA
TTCTGCCTGAGGGATCCAGTGACATTAGGCTGTCCACGCCCTACTCCATC
AGCCGATTGCCCAATGAGCTGGTGCACACCTATCTGGATACCATTGGTCG
CCCGGTGGTCTCGTTCTCCAAATCCAATTTGGTCGAAAGCCACATTTCGG
ACTTTACGCTCCACTACAGCTTCTCGAAGACTTCTATGCTGCAGGAACCC
CTGCTGGTCAGCGGCTTTATTTATATCATCTTCTTGTTCACCATCGTCTT
CTTGCGTTTGGACTTTTCGATCACATCCCATGCGCATAAGGAATAAGTAA
ATCTTTAGATTTCCTCTAAATTTAGTCACTCATCAGATTGTAAAAGATCA
AAATGAAACAAAACTACTATTTTGCAAATAACAAACGAAAATAAATAAAA
GCTTGCACTTGATGGCGTGAAATTTAATCGTAAAAAGGTAATGTTTCTTC
TAGCTAAAAATGAAATAAATTCCAAAACTAGAGCACTATATTTTTTAAAA
TAACAAAGTGCACATATGCCCAAATTCGGCGGCAGGATATTTTCTGTCAT
CTCAAACGACGAATTTCGCACATGCGCGCGAAAAGTCGAAAATTATTTCC
GAGTGGTTTGAACTTTTTCGACGAGTGTGCTGTGTACATATGCATTAGTG
GTTATAAAATTGTTAGAAAAAATGGATTAATCAATGTGAAAAATTAGTAA
TTTAAGTGATAAACAAAACAATACAAATCAAAAAGGCCATTAAGCTGTGA
ATCGAAAACAATTTGACAATGTGCTTTTGTACTTTTTGTTATGAAGGCAT
GAGTGGAAAATCGATAAAGCAATTTTCGGTCTGTAAACAGGCTTAACAGA
AATAAAGATGAAGTGAAAAATCAGTAAAATGCATTTATAAAACTAATTCC
ATCGAACCTGCCAAAGTGAGTTCAAAGTGTATGCTTTCATAAATAATAAT
AATGCATGTTTTTAAACACATTATAACAGTCTGAATATAATTATGTATAC
CAATCTCAGTACATATTTTTTTTGCTCATACCGGAAATTATGTTTAATAA
TATGATATACGAAATATATATGATATATATGCATATTTGGAAATCTTAAG
AGTAGACATATTTAATGTTCGAAATAGAACTTCCAGTTTTGATGGCAGCA
CAAGTATTTCAGATTACTCATGTGCGCCCTTGGCCCTTTTTTTTAAATGT
TTGTATCCCAAATAGAGATTTGGCGGATAAACGAAAACTTTAAAGAAGTA
ATCCTAACTTCATTTTTCTAAAAGTTTATAAAAATACATGCAAAAACCAT
AAAAGATTAATAATTAAAAATAGTATTGAATAGTAACTTTAACTTAACTT
TACAAATCTACCTATAGAAATATAGCAAACATTTGCTGTTATTAAATTTA
CATACAATTAAAATGTATAACAAATAAGAAAATATATTTTTAAACTTACC
AAAAAATCGCTTAATTCCCATTTAGACGATTAAGCCAGATGAGCTTTAAG
ATGCAATTGGGTCATGTAGACTTTTATTAAGCCCACGAAGTTAAAGTTCT
GTAAAATGATTAAATATGAACTTCTTAGTCATTAGTAATGGTAGAATAAA
CCAAGAGAACATAAGTATATCAGTTGTGGAGTTACCTACCCAAAAAAAAA
AAAAAAA

FI20527.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 14:28:03
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 10371813..10373947 2741..605 10220 99.1 Minus
chr2L 23010047 chr2L 10374006..10374610 605..1 2950 99.2 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 14:28:00
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 10372954..10375092 2742..605 10645 100 Minus
2L 23513712 2L 10375148..10375752 605..1 3010 99.8 Minus
Blast to na_te.dros performed 2019-03-15 14:28:01
Subject Length Description Subject Range Query Range Score Percent Strand
McClintock 6450 McClintock McCLINTOCK 6450bp 713..953 2290..2544 169 56.6 Plus
Dyak\HeT-A 5691 Dyak\HeT-A YAKHETA 5691bp 89..309 2355..2567 142 58.5 Plus
Quasimodo 7387 Quasimodo QUASIMODO 7387bp Derived from P1 clones DS08479 & DS07153 by Sue Celniker, 29 March 2001. 2120..2459 2325..2678 128 53.2 Plus
Tabor 7345 Tabor TABOR 7345bp 429..502 1980..1907 126 66.7 Minus
Tabor 7345 Tabor TABOR 7345bp 7268..7341 1980..1907 126 66.7 Minus
invader3 5484 invader3 INVADER3 5484bp 65..224 1375..1527 124 59.3 Plus
invader3 5484 invader3 INVADER3 5484bp 5251..5410 1375..1527 124 59.3 Plus
Dbuz\Newton 1510 Dbuz\Newton NEWTON 1510bp 672..742 1731..1797 120 67.6 Plus

FI20527.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 14:28:49 Download gff for FI20527.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 10371813..10372002 2551..2741 98 == Minus
chr2L 10372065..10373946 606..2488 99 <- Minus
chr2L 10374006..10374610 1..605 99   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2013-05-30 16:41:13 Download gff for FI20527.complete
Subject Subject Range Query Range Percent Splice Strand
CG33303-RA 1..1377 20..1396 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 00:29:57 Download gff for FI20527.complete
Subject Subject Range Query Range Percent Splice Strand
CG33303-RA 1..1377 20..1396 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:59:24 Download gff for FI20527.complete
Subject Subject Range Query Range Percent Splice Strand
CG33303-RA 1..1377 20..1396 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-05-30 16:41:13 Download gff for FI20527.complete
Subject Subject Range Query Range Percent Splice Strand
CG33303-RA 39..1549 1..1511 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:29:57 Download gff for FI20527.complete
Subject Subject Range Query Range Percent Splice Strand
CG33303-RB 6..2333 1..2328 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:59:24 Download gff for FI20527.complete
Subject Subject Range Query Range Percent Splice Strand
CG33303-RB 6..2333 1..2328 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:28:49 Download gff for FI20527.complete
Subject Subject Range Query Range Percent Splice Strand
2L 10372955..10375091 606..2741 99 <- Minus
2L 10375148..10375752 1..605 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:28:49 Download gff for FI20527.complete
Subject Subject Range Query Range Percent Splice Strand
2L 10372955..10375091 606..2741 99 <- Minus
2L 10375148..10375752 1..605 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:28:49 Download gff for FI20527.complete
Subject Subject Range Query Range Percent Splice Strand
2L 10372955..10375091 606..2741 99 <- Minus
2L 10375148..10375752 1..605 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:29:57 Download gff for FI20527.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 10372955..10375091 606..2741 99 <- Minus
arm_2L 10375148..10375752 1..605 99   Minus

FI20527.hyp Sequence

Translation from 0 to 1395

> FI20527.hyp
TLRDFPMYVSKFEASMATNFVIYLALGALLCLATANGEIVNTNVERTLDL
TSQLVKTTTKISAEDSAGKPIVEYVFFTSEPSLAYIDVKDASDKSVPFKR
NEPVKGEQSFTFTFPRAAAKQTFIVETVASKGIRPHPEEIRQNDKQFVKY
TGNLHLYSKYRTNSQKTNVKLSSSNILSHTQVKPFSVSSNKITLGPYENV
EAFSQEPLVIHYENSAPFVTVNTLERTLEISHWGNIAVQESIQMTHTGAK
LKGSFSRYDFQKEGRSGLAALKSYKTYLPASASGVYYRDTNGNISTSNMN
AVRDFIELELRPRFPLFGGWKTQYTLGYNVPSYEYMFNDGNKYQLKMHLI
DHIYDNMAIDEATIKIILPEGSSDIRLSTPYSISRLPNELVHTYLDTIGR
PVVSFSKSNLVESHISDFTLHYSFSKTSMLQEPLLVSGFIYIIFLFTIVF
LRLDFSITSHAHKE*

FI20527.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:54:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG33303-PB 458 CG33303-PB 1..458 7..464 2347 100 Plus
CG33303-PA 458 CG33303-PA 1..458 7..464 2347 100 Plus

FI20527.pep Sequence

Translation from 1 to 1395

> FI20527.pep
TVRDFPMYVSKFEASMATNFVIYLALGALLCLATANGEIVNTNVERTLDL
TSQLVKTTTKISAEDSAGKPIVEYVFFTSEPSLAYIDVKDASDKSVPFKR
NEPVKGEQSFTFTFPRAAAKQTFIVETVASKGIRPHPEEIRQNDKQFVKY
TGNLHLYSKYRTNSQKTNVKLSSSNILSHTQVKPFSVSSNKITLGPYENV
EAFSQEPLVIHYENSAPFVTVNTLERTLEISHWGNIAVQESIQMTHTGAK
LKGSFSRYDFQKEGRSGLAALKSYKTYLPASASGVYYRDTNGNISTSNMN
AVRDFIELELRPRFPLFGGWKTQYTLGYNVPSYEYMFNDGNKYQLKMHLI
DHIYDNMAIDEATIKIILPEGSSDIRLSTPYSISRLPNELVHTYLDTIGR
PVVSFSKSNLVESHISDFTLHYSFSKTSMLQEPLLVSGFIYIIFLFTIVF
LRLDFSITSHAHKE*

FI20527.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 12:19:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF14104-PA 449 GF14104-PA 1..449 16..464 2095 86.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 12:19:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG23939-PA 458 GG23939-PA 1..458 7..464 2364 96.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 12:19:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH13364-PA 447 GH13364-PA 2..447 20..464 1671 67.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:16:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG33303-PB 458 CG33303-PB 1..458 7..464 2347 100 Plus
CG33303-PA 458 CG33303-PA 1..458 7..464 2347 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 12:19:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI10683-PA 450 GI10683-PA 1..450 16..464 1582 65.8 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 12:19:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL19179-PA 451 GL19179-PA 6..451 20..464 1865 75.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 12:19:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM11699-PA 458 GM11699-PA 1..458 7..464 2396 98 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 12:19:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD22265-PA 454 GD22265-PA 1..454 7..464 2228 95 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 12:19:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ14925-PA 450 GJ14925-PA 1..450 16..464 1620 67.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 12:19:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK23360-PA 569 GK23360-PA 6..393 22..412 1376 63.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 12:19:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE26020-PA 458 GE26020-PA 1..458 7..464 2372 96.5 Plus