Clone FI20702 Report

Search the DGRC for FI20702

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:207
Well:2
Vector:pOT2
Associated Gene/TranscriptCG4021-RA
Protein status:FI20702.pep: gold
Sequenced Size:1162

Clone Sequence Records

FI20702.complete Sequence

1162 bp assembled on 2012-07-27

GenBank Submission: BT149850.1

> FI20702.complete
TTCAGCCTACATCAATTTTAATTGTGATTTTTCGCTAAAGATTGTTATGG
AAAAAATGGAAAACCCAAGCGAGATTACTGAGGAACAGCCAACTACCACA
CACGAGTACCAGCCGCGTCTGAACGAGATAGCCCAAAAGTTTCTCGCCGA
TTTGGACGAGGAGCGCCAGCGTTTGTCCGCGGAGTTTCCACTTTGCGCAC
TGCTAATCGACGAGGCTAGGGACCGTGTCTACGCCACTGGTCGTATTCCC
GGCAAGGAACTCTACGCAGACGTGTACCGGCAGAAGCCGATGAAGATTAT
TCAAAAGGTCTTCGTGCCCGTTAACCAGTATCCCAAGTTCAACTTCGCTG
GCAAGATCCTGGGGCCCAAGGGGAACTCGCTGCGTCGCCTTCAGGAGGAG
ACCCAGTGCAAGATTGCCCTCAAGGGTCGCAGTTCGATGCGCGATCGTAA
CAAAGAGGAAGAGCTGCGCAGCGACCCAAGATATGCCCATCTTCAGAAGA
ATCTCTTTCTGGAGGTCAGCACGGTGGCCATACCGGCGGAGTGCCATTCC
CGCATAGCCTACGCCCTGGCCGAGATTCGTAAGTATCTGATTCCAGACAA
TAACGACGAGGTTTCGCACGAGCAGCTGCGCGAGCTGATGGAAATAGATC
CCGAGTCGGCCAAGAACTTTAAGGGACTCAATCTGGAGGCGTACAGATCT
GTCAGGGACAGCAATGGGGCTTCTAAGTACATCAATCTGATTAAGCGGGT
TGCGGAAAATCCGTCCAAAGTCGCCGATATGGAGCAGGTGGACTATGATT
ATGATGAACATCATATGCCCCCCATTCATCTGCCCACGGGCTATGAGTAC
AGCATACAACGTCCATCAAAAATAGTTGCGAAATTTAAACGTCCATATCC
GTATCCGACTGACATGAAACCTGTGCGCGAACCGCCCATAAAGTTCTATA
AGCCCAATCCTGGTATAGGCACCTACGTTATGAAATCTATGCTTGGAGCA
CAGTAAGAAAGCTGCATTCAAAATGATGCTATCAATGAAGAAACATTAAC
ATTTATATAAAAGCGCACATTACCGCAAACAATATTATTATAATGTACCT
TTCCTTACTTCGTAAAAAACGTTAATAAAATGATACGTATACCCAAAAAA
AAAAAAAAAAAA

FI20702.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 13:59:04
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 17660209..17660569 336..696 1790 99.7 Plus
chr2R 21145070 chr2R 17660988..17661278 854..1144 1440 99.7 Plus
chr2L 23010047 chr2L 20861949..20862304 690..336 1280 91.3 Minus
chr2R 21145070 chr2R 18297203..18297569 696..336 1215 89.4 Minus
chr2R 21145070 chr2R 18481656..18482022 336..696 1140 88 Plus
chr2R 21145070 chr2R 18537617..18537983 336..696 1125 87.7 Plus
chr2R 21145070 chr2R 17659754..17659968 1..215 1060 99.5 Plus
chr2R 21145070 chr2R 18297809..18298019 215..1 645 88.8 Minus
chr2R 21145070 chr2R 17660027..17660149 215..337 585 98.4 Plus
chr2L 23010047 chr2L 20922429..20922640 1..215 545 84.7 Plus
chr2R 21145070 chr2R 18481201..18481414 1..213 525 86.1 Plus
chr2R 21145070 chr2R 17660832..17660920 769..857 445 100 Plus
chr2R 21145070 chr2R 18537269..18537375 107..213 445 94.4 Plus
chr2L 23010047 chr2L 20899728..20899834 109..215 445 94.4 Plus
chr2R 21145070 chr2R 18481479..18481596 220..337 425 90.7 Plus
chr2R 21145070 chr2R 18297628..18297745 337..220 410 89.8 Minus
chr2L 23010047 chr2L 20922702..20922819 220..337 410 89.8 Plus
chr2R 21145070 chr2R 18537440..18537557 220..337 395 89 Plus
chr2R 21145070 chr2R 17660650..17660724 694..768 375 100 Plus
chr2L 23010047 chr2L 20899874..20899975 236..337 360 90.2 Plus
chr2L 23010047 chr2L 20861325..20861508 1068..891 330 79.9 Minus
chr2R 21145070 chr2R 13358220..13358356 336..472 280 80.3 Plus
chr2R 21145070 chr2R 18538595..18538672 883..960 270 89.7 Plus
chr2R 21145070 chr2R 18538325..18538410 769..854 250 86 Plus
chr2R 21145070 chr2R 18303060..18303139 335..414 250 87.5 Plus
chr2R 21145070 chr2R 18296431..18296493 960..898 240 92.1 Minus
chr2R 21145070 chr2R 18301334..18301479 472..327 235 77.4 Minus
chr2R 21145070 chr2R 18537147..18537235 1..88 215 85.4 Plus
chr2R 21145070 chr2R 18296244..18296296 1057..1005 205 92.5 Minus
chr2R 21145070 chr2R 18482364..18482412 769..817 185 91.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 13:59:02
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 21773807..21774167 336..696 1805 100 Plus
2R 25286936 2R 21774586..21774880 854..1148 1460 99.7 Plus
2R 25286936 2R 22410687..22411053 696..336 1200 89.1 Minus
2L 23513712 2L 20863421..20863772 690..336 1200 90.4 Minus
2R 25286936 2R 22595151..22595517 336..696 1125 87.7 Plus
2R 25286936 2R 22651051..22651417 336..696 1095 87.2 Plus
2R 25286936 2R 21773352..21773566 1..215 1075 100 Plus
2R 25286936 2R 22411293..22411503 215..1 645 88.8 Minus
2R 25286936 2R 21773625..21773747 215..337 615 100 Plus
2L 23513712 2L 20923900..20924111 1..215 530 84.2 Plus
2R 25286936 2R 22594696..22594909 1..213 525 86.1 Plus
2R 25286936 2R 22650703..22650809 107..213 460 95.3 Plus
2R 25286936 2R 21774430..21774518 769..857 445 100 Plus
2L 23513712 2L 20901193..20901299 109..215 430 93.5 Plus
2R 25286936 2R 22594974..22595091 220..337 425 90.7 Plus
2R 25286936 2R 22411112..22411229 337..220 410 89.8 Minus
2L 23513712 2L 20924173..20924290 220..337 410 89.8 Plus
2R 25286936 2R 22650874..22650991 220..337 395 89 Plus
2R 25286936 2R 21774248..21774322 694..768 375 100 Plus
2L 23513712 2L 20901339..20901440 236..337 360 90.2 Plus
2L 23513712 2L 20862797..20862980 1068..891 330 79.9 Minus
2R 25286936 2R 17471170..17471306 336..472 280 80.3 Plus
2R 25286936 2R 22652029..22652106 883..960 270 89.7 Plus
2R 25286936 2R 22416544..22416623 335..414 250 87.5 Plus
2R 25286936 2R 22651759..22651844 769..854 250 86 Plus
2R 25286936 2R 22409915..22409977 960..898 240 92.1 Minus
2R 25286936 2R 22414818..22414963 472..327 235 77.4 Minus
2R 25286936 2R 22650581..22650669 1..88 230 86.5 Plus
2R 25286936 2R 22409728..22409780 1057..1005 205 92.5 Minus
2R 25286936 2R 22595859..22595907 769..817 185 91.8 Plus
Blast to na_te.dros performed on 2019-03-15 13:59:03 has no hits.

FI20702.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 13:59:52 Download gff for FI20702.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 17660028..17660149 216..337 98 -> Plus
chr2R 17660992..17661278 858..1144 100   Plus
chr2R 17660211..17660569 338..696 99 -> Plus
chr2R 17660653..17660724 697..768 100 -> Plus
chr2R 17660832..17660920 769..857 100 -> Plus
chr2R 17659754..17659968 1..215 99 -> Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-07-27 12:29:56 Download gff for FI20702.complete
Subject Subject Range Query Range Percent Splice Strand
CG4021-RA 1..960 47..1006 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 22:19:48 Download gff for FI20702.complete
Subject Subject Range Query Range Percent Splice Strand
CG4021-RA 1..960 47..1006 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:47:55 Download gff for FI20702.complete
Subject Subject Range Query Range Percent Splice Strand
CG4021-RA 1..960 47..1006 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-27 12:29:55 Download gff for FI20702.complete
Subject Subject Range Query Range Percent Splice Strand
CG4021-RA 6..1149 1..1144 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 22:19:48 Download gff for FI20702.complete
Subject Subject Range Query Range Percent Splice Strand
CG4021-RA 58..1201 1..1144 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:47:55 Download gff for FI20702.complete
Subject Subject Range Query Range Percent Splice Strand
CG4021-RA 58..1201 1..1144 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:59:52 Download gff for FI20702.complete
Subject Subject Range Query Range Percent Splice Strand
2R 21773352..21773566 1..215 100 -> Plus
2R 21773626..21773747 216..337 100 -> Plus
2R 21773809..21774167 338..696 100 -> Plus
2R 21774251..21774322 697..768 100 -> Plus
2R 21774430..21774518 769..857 100 -> Plus
2R 21774590..21774876 858..1144 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:59:52 Download gff for FI20702.complete
Subject Subject Range Query Range Percent Splice Strand
2R 21773352..21773566 1..215 100 -> Plus
2R 21773626..21773747 216..337 100 -> Plus
2R 21773809..21774167 338..696 100 -> Plus
2R 21774251..21774322 697..768 100 -> Plus
2R 21774430..21774518 769..857 100 -> Plus
2R 21774590..21774876 858..1144 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:59:52 Download gff for FI20702.complete
Subject Subject Range Query Range Percent Splice Strand
2R 21773352..21773566 1..215 100 -> Plus
2R 21773626..21773747 216..337 100 -> Plus
2R 21773809..21774167 338..696 100 -> Plus
2R 21774251..21774322 697..768 100 -> Plus
2R 21774430..21774518 769..857 100 -> Plus
2R 21774590..21774876 858..1144 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 22:19:48 Download gff for FI20702.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 17661314..17661672 338..696 100 -> Plus
arm_2R 17661756..17661827 697..768 100 -> Plus
arm_2R 17661935..17662023 769..857 100 -> Plus
arm_2R 17660857..17661071 1..215 100 -> Plus
arm_2R 17661131..17661252 216..337 100 -> Plus
arm_2R 17662095..17662381 858..1144 100   Plus

FI20702.hyp Sequence

Translation from 0 to 1005

> FI20702.hyp
SAYINFNCDFSLKIVMEKMENPSEITEEQPTTTHEYQPRLNEIAQKFLAD
LDEERQRLSAEFPLCALLIDEARDRVYATGRIPGKELYADVYRQKPMKII
QKVFVPVNQYPKFNFAGKILGPKGNSLRRLQEETQCKIALKGRSSMRDRN
KEEELRSDPRYAHLQKNLFLEVSTVAIPAECHSRIAYALAEIRKYLIPDN
NDEVSHEQLRELMEIDPESAKNFKGLNLEAYRSVRDSNGASKYINLIKRV
AENPSKVADMEQVDYDYDEHHMPPIHLPTGYEYSIQRPSKIVAKFKRPYP
YPTDMKPVREPPIKFYKPNPGIGTYVMKSMLGAQ*

FI20702.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:35:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG4021-PA 319 CG4021-PA 1..319 16..334 1669 100 Plus
qkr58E-3-PD 317 CG3584-PD 1..309 19..320 1221 79.2 Plus
qkr58E-3-PB 317 CG3584-PB 1..309 19..320 1221 79.2 Plus
qkr58E-3-PC 317 CG3584-PC 1..309 19..320 1221 79.2 Plus
nsr-PB 340 CG3875-PB 1..318 19..320 1124 71.4 Plus

FI20702.pep Sequence

Translation from 1 to 1005

> FI20702.pep
SAYINFNCDFSLKIVMEKMENPSEITEEQPTTTHEYQPRLNEIAQKFLAD
LDEERQRLSAEFPLCALLIDEARDRVYATGRIPGKELYADVYRQKPMKII
QKVFVPVNQYPKFNFAGKILGPKGNSLRRLQEETQCKIALKGRSSMRDRN
KEEELRSDPRYAHLQKNLFLEVSTVAIPAECHSRIAYALAEIRKYLIPDN
NDEVSHEQLRELMEIDPESAKNFKGLNLEAYRSVRDSNGASKYINLIKRV
AENPSKVADMEQVDYDYDEHHMPPIHLPTGYEYSIQRPSKIVAKFKRPYP
YPTDMKPVREPPIKFYKPNPGIGTYVMKSMLGAQ*

FI20702.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 12:03:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF13022-PA 316 GF13022-PA 1..308 19..320 1178 76.4 Plus
Dana\GF13124-PA 558 GF13124-PA 61..239 39..214 557 58.7 Plus
Dana\GF11890-PA 390 GF11890-PA 54..232 45..223 543 59.7 Plus
Dana\GF13021-PA 396 GF13021-PA 46..228 32..212 511 52.5 Plus
Dana\GF11894-PA 471 GF11894-PA 23..130 110..215 380 61.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 12:03:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG20697-PA 316 GG20697-PA 1..308 19..320 1192 77.3 Plus
Dere\GG20683-PA 428 GG20683-PA 60..238 39..214 555 58.1 Plus
Dere\GG22189-PA 416 GG22189-PA 74..252 45..223 539 59.1 Plus
Dere\GG20696-PA 396 GG20696-PA 42..228 31..212 512 51.9 Plus
Dere\GG21049-PA 472 GG21049-PA 23..130 110..215 375 61.1 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 12:03:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH20535-PA 319 GH20535-PA 1..310 19..319 1160 74.4 Plus
Dgri\GH21401-PA 448 GH21401-PA 62..240 39..214 560 58.1 Plus
Dgri\GH21366-PA 395 GH21366-PA 55..239 39..223 554 58.8 Plus
Dgri\GH20534-PA 399 GH20534-PA 55..231 38..212 506 52.5 Plus
Dgri\GH21368-PA 429 GH21368-PA 3..130 90..215 427 59.4 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:19:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG4021-PA 319 CG4021-PA 1..319 16..334 1669 100 Plus
qkr58E-3-PD 317 CG3584-PD 1..309 19..320 1221 79.2 Plus
qkr58E-3-PB 317 CG3584-PB 1..309 19..320 1221 79.2 Plus
qkr58E-3-PC 317 CG3584-PC 1..309 19..320 1221 79.2 Plus
nsr-PB 340 CG3875-PB 1..318 19..320 1124 71.4 Plus
nsr-PA 340 CG3875-PA 1..318 19..320 1124 71.4 Plus
CG3927-PA 270 CG3927-PA 1..262 19..272 977 74.4 Plus
qkr54B-PD 428 CG4816-PD 60..238 39..214 550 58.1 Plus
qkr54B-PB 428 CG4816-PB 60..238 39..214 550 58.1 Plus
qkr54B-PA 428 CG4816-PA 60..238 39..214 550 58.1 Plus
qkr54B-PE 617 CG4816-PE 60..238 39..214 550 58.1 Plus
qkr58E-2-PB 416 CG5821-PB 74..250 45..221 529 59.8 Plus
qkr58E-2-PC 416 CG5821-PC 74..250 45..221 529 59.8 Plus
qkr58E-2-PA 416 CG5821-PA 74..250 45..221 529 59.8 Plus
qkr58E-1-PD 379 CG3613-PD 42..334 31..300 507 38.9 Plus
qkr58E-1-PC 357 CG3613-PC 42..228 31..212 504 51.9 Plus
qkr58E-1-PA 396 CG3613-PA 42..228 31..212 504 51.9 Plus
CG10384-PE 492 CG10384-PE 25..152 90..215 411 59.4 Plus
CG10384-PD 492 CG10384-PD 25..152 90..215 411 59.4 Plus
how-PB 375 CG10293-PB 61..256 29..216 259 33.5 Plus
how-PC 380 CG10293-PC 61..256 29..216 259 33.5 Plus
how-PE 404 CG10293-PE 61..256 29..216 259 33.5 Plus
how-PD 405 CG10293-PD 61..256 29..216 259 33.5 Plus
how-PA 405 CG10293-PA 61..256 29..216 259 33.5 Plus
how-PF 418 CG10293-PF 61..256 29..216 259 33.5 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 12:03:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI18981-PA 318 GI18981-PA 1..309 19..319 1112 74.6 Plus
Dmoj\GI20561-PA 386 GI20561-PA 49..233 39..223 568 60.4 Plus
Dmoj\GI18580-PA 442 GI18580-PA 66..260 39..224 562 55.4 Plus
Dmoj\GI18980-PA 401 GI18980-PA 45..231 31..212 509 51.3 Plus
Dmoj\GI20563-PA 463 GI20563-PA 45..152 110..215 374 61.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 12:03:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL11428-PA 639 GL11428-PA 56..234 39..214 563 58.1 Plus
Dper\GL17545-PA 383 GL17545-PA 55..249 45..239 547 56.3 Plus
Dper\GL16926-PA 261 GL16926-PA 1..162 19..178 545 68.5 Plus
Dper\GL16924-PA 214 GL16924-PA 52..214 38..198 467 51.5 Plus
Dper\GL24013-PA 402 GL24013-PA 75..253 47..216 252 33.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 12:03:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA17537-PA 325 GA17537-PA 1..316 19..319 1093 74.4 Plus
Dpse\GA18453-PA 430 GA18453-PA 56..234 39..214 557 58.1 Plus
Dpse\GA19155-PA 383 GA19155-PA 55..249 45..239 547 56.3 Plus
Dpse\GA17559-PA 393 GA17559-PA 52..228 38..212 511 52 Plus
Dpse\GA10291-PB 428 GA10291-PB 23..130 110..215 368 60.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 12:03:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM15865-PA 313 GM15865-PA 1..313 16..334 1359 85 Plus
Dsec\GM15642-PA 317 GM15642-PA 1..309 19..320 1221 78.9 Plus
Dsec\GM23284-PA 313 GM23284-PA 1..309 19..320 1138 74.8 Plus
Dsec\GM23298-PA 313 GM23298-PA 1..309 19..320 1138 75.2 Plus
Dsec\GM15922-PA 322 GM15922-PA 1..322 19..324 1124 71.4 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 12:03:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD11626-PA 315 GD11626-PA 1..315 19..334 1354 82.9 Plus
Dsim\GD21670-PA 318 GD21670-PA 1..318 19..334 1136 72.2 Plus
Dsim\GD11683-PA 557 GD11683-PA 228..526 26..320 1083 72.5 Plus
Dsim\GD25131-PA 254 GD25131-PA 1..250 19..261 1049 82.1 Plus
Dsim\GD11271-PA 428 GD11271-PA 60..238 39..214 556 58.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 12:03:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ19943-PA 318 GJ19943-PA 1..309 19..319 1103 74.6 Plus
Dvir\GJ22415-PA 382 GJ22415-PA 44..228 39..223 570 60.4 Plus
Dvir\GJ20374-PA 450 GJ20374-PA 73..251 39..214 558 58.1 Plus
Dvir\GJ19941-PA 400 GJ19941-PA 45..231 31..212 507 51.3 Plus
Dvir\GJ19910-PA 424 GJ19910-PA 3..130 90..215 425 59.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 12:03:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK20825-PA 322 GK20825-PA 1..313 19..319 1122 72.3 Plus
Dwil\GK22901-PA 428 GK22901-PA 57..249 39..224 551 55.4 Plus
Dwil\GK20819-PA 408 GK20819-PA 66..244 45..223 540 59.1 Plus
Dwil\GK20824-PA 407 GK20824-PA 60..314 38..274 516 42 Plus
Dwil\GK17902-PA 435 GK17902-PA 3..130 90..215 425 59.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 12:03:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\kep1-PA 317 GE11681-PA 1..309 19..320 1220 78.9 Plus
Dyak\GE11667-PA 428 GE11667-PA 60..238 39..214 554 58.1 Plus
Dyak\GE14183-PA 416 GE14183-PA 74..252 45..223 539 59.1 Plus
Dyak\GE11680-PA 395 GE11680-PA 41..227 31..212 511 51.9 Plus
Dyak\GE13991-PA 474 GE13991-PA 23..130 110..215 375 61.1 Plus