Clone FI20725 Report

Search the DGRC for FI20725

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:207
Well:25
Vector:pOT2
Associated Gene/TranscriptCG15293-RA
Protein status:FI20725.pep: gold
Sequenced Size:1199

Clone Sequence Records

FI20725.complete Sequence

1199 bp assembled on 2012-07-27

GenBank Submission: BT149848.1

> FI20725.complete
TCGATCGAAGTATTCACAAGTGTCGCGGAAAGATCGAATATGCAGTACTC
CTATCTACTGGCAATCTGTGTCAGCTTGCTGCTTCTGAAGCTGAAGGGAG
CAGCTGCCACTTCTTTATCCGCCGAACCGACTCCGGAACTTTTGAATGCG
GCCAAGCAAATAGGTTTAGATGAAGTTGGCTTGCGAGAAATGTGGCACAG
CCAGCAGCCGCTGGTTATCAGAACTCAAAACGATGCTGGTCAAGTCACCA
CTTTGACCTATGAGTTAGGTCCGGATTTCAGATCGATTTTAAGACGCAAG
GTCTCAGAGGGAATACTGCCTGCTAGGCTAGAGGATAATTCAGGCTCTAA
GCCCCAGCAAGATTGGGAGTATGTGCCGAGTGCCGGTCGTCAGTTCCGTC
CCATTGGAGATTCCAACTTCGGTACAGGTAATTTCGAGACAAAGATATTT
AGCACTGAATTTCCGAGATTTCCGAATTGGGAGCTGCCAGCGGGAGTTAC
TCCGAAAGTTACAACCAAGACGGAAACGGATAGCTCGGGACGCAAGGTGA
CCACCACAACTAGAACTTATAGCGGCATTCTGGTCCCAGGCAGTAATGTA
TTCAAGCAGATATTCCCCGACATCTCCAGAGAGCCTGGTCCAATTAACAC
AGACTCAAACCATCCAGCCGAGAATCCTAACACCTCAGTCTTTTCCCCAT
CTCGTTCCCCATCTACTGGACCTATTGATTTCAACTATGTATATAATTCC
CGACCAAGCCAAAGGGAACCCGTCTTTGTGCCAGTGATTGACTCAACCAC
CACGCAGCGGACTTCAGTTCCCCGGTTCAGTTCAGCATTACCAAGAGACG
ACGGATCAGATCGAGTCATAGATGATTATTTGAAACAAGTGAATCTGAGT
GCCTCAGAAATTGAGAATTCGAATGGTGAAGTGGTCAAGACTATTGTGGA
TAAGAATGGCAGAATTCTAACTGCCAGATTTGTTCTAAGCTCAGTCAAAG
GAACCAACGAAGGATCTCAGCAGCAGAGGCCGACCAAGTAAATAGCTCAT
TATAAATATTAATATATGGAAATCATCGCAATATTTTGTAAACAATGCTT
AGCGCAGTTTAATAAATAAGCTTATCAGCCTGGGCTAAACCCAGAAATTG
TAATAAAATTTCTAAATCAATCTATCACTGAAAAAAAAAAAAAAAAAAA

FI20725.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 13:59:09
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 14106821..14107906 1180..95 5430 100 Minus
chr2L 23010047 chr2L 14107958..14108054 97..1 485 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 13:59:08
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 14108054..14109142 1183..95 5445 100 Minus
2L 23513712 2L 14109194..14109290 97..1 485 100 Minus
Blast to na_te.dros performed on 2019-03-15 13:59:08 has no hits.

FI20725.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 13:59:54 Download gff for FI20725.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 14106821..14107904 97..1180 100 <- Minus
chr2L 14107959..14108054 1..96 100   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-07-27 14:13:33 Download gff for FI20725.complete
Subject Subject Range Query Range Percent Splice Strand
CG15293-RA 1..1002 40..1041 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 22:19:53 Download gff for FI20725.complete
Subject Subject Range Query Range Percent Splice Strand
CG15293-RA 1..1002 40..1041 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:48:00 Download gff for FI20725.complete
Subject Subject Range Query Range Percent Splice Strand
CG15293-RA 1..1002 40..1041 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-27 14:13:33 Download gff for FI20725.complete
Subject Subject Range Query Range Percent Splice Strand
CG15293-RA 15..1194 1..1180 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 22:19:53 Download gff for FI20725.complete
Subject Subject Range Query Range Percent Splice Strand
CG15293-RA 15..1194 1..1180 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:48:00 Download gff for FI20725.complete
Subject Subject Range Query Range Percent Splice Strand
CG15293-RA 1..1180 1..1180 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:59:54 Download gff for FI20725.complete
Subject Subject Range Query Range Percent Splice Strand
2L 14108057..14109140 97..1180 100 <- Minus
2L 14109195..14109290 1..96 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:59:54 Download gff for FI20725.complete
Subject Subject Range Query Range Percent Splice Strand
2L 14108057..14109140 97..1180 100 <- Minus
2L 14109195..14109290 1..96 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:59:54 Download gff for FI20725.complete
Subject Subject Range Query Range Percent Splice Strand
2L 14108057..14109140 97..1180 100 <- Minus
2L 14109195..14109290 1..96 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 22:19:53 Download gff for FI20725.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 14108057..14109140 97..1180 100 <- Minus
arm_2L 14109195..14109290 1..96 100   Minus

FI20725.pep Sequence

Translation from 0 to 1040

> FI20725.pep
SIEVFTSVAERSNMQYSYLLAICVSLLLLKLKGAAATSLSAEPTPELLNA
AKQIGLDEVGLREMWHSQQPLVIRTQNDAGQVTTLTYELGPDFRSILRRK
VSEGILPARLEDNSGSKPQQDWEYVPSAGRQFRPIGDSNFGTGNFETKIF
STEFPRFPNWELPAGVTPKVTTKTETDSSGRKVTTTTRTYSGILVPGSNV
FKQIFPDISREPGPINTDSNHPAENPNTSVFSPSRSPSTGPIDFNYVYNS
RPSQREPVFVPVIDSTTTQRTSVPRFSSALPRDDGSDRVIDDYLKQVNLS
ASEIENSNGEVVKTIVDKNGRILTARFVLSSVKGTNEGSQQQRPTK*

FI20725.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 12:03:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF15602-PA 359 GF15602-PA 1..359 14..346 459 38.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 12:03:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG10161-PA 329 GG10161-PA 1..329 14..346 1163 71.6 Plus
Dere\GG10160-PA 66 GG10160-PA 4..64 285..345 146 47.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 12:03:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH10599-PA 486 GH10599-PA 429..480 290..341 175 59.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:37:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG15293-PC 333 CG15293-PC 1..333 14..346 1717 100 Plus
CG15293-PA 333 CG15293-PA 1..333 14..346 1717 100 Plus
CG31769-PA 311 CG31769-PA 1..295 14..331 226 26.2 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 12:03:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI17387-PA 516 GI17387-PA 30..182 43..192 196 34.2 Plus
Dmoj\GI17387-PA 516 GI17387-PA 456..516 287..346 172 56.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 12:03:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL21057-PA 422 GL21057-PA 195..422 151..346 238 37.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 12:03:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA13631-PA 376 GA13631-PA 1..376 14..346 410 35.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 12:03:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM14940-PA 330 GM14940-PA 1..330 14..346 1518 88.3 Plus
Dsec\GM14929-PA 311 GM14929-PA 1..306 14..342 225 26.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 12:03:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD22018-PA 330 GD22018-PA 1..330 14..346 1508 87.7 Plus
Dsim\GD22017-PA 311 GD22017-PA 1..311 14..346 230 28.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 12:03:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ18065-PA 531 GJ18065-PA 1..214 14..201 260 34.5 Plus
Dvir\GJ18065-PA 531 GJ18065-PA 468..531 287..346 166 50 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 12:03:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK15103-PA 478 GK15103-PA 1..385 14..326 231 27.6 Plus
Dwil\GK15103-PA 478 GK15103-PA 411..478 277..346 190 57.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 12:03:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE25137-PA 334 GE25137-PA 1..334 14..346 1228 73.7 Plus
Dyak\GE25126-PA 282 GE25126-PA 198..271 256..330 192 50.7 Plus

FI20725.hyp Sequence

Translation from 0 to 1040

> FI20725.hyp
SIEVFTSVAERSNMQYSYLLAICVSLLLLKLKGAAATSLSAEPTPELLNA
AKQIGLDEVGLREMWHSQQPLVIRTQNDAGQVTTLTYELGPDFRSILRRK
VSEGILPARLEDNSGSKPQQDWEYVPSAGRQFRPIGDSNFGTGNFETKIF
STEFPRFPNWELPAGVTPKVTTKTETDSSGRKVTTTTRTYSGILVPGSNV
FKQIFPDISREPGPINTDSNHPAENPNTSVFSPSRSPSTGPIDFNYVYNS
RPSQREPVFVPVIDSTTTQRTSVPRFSSALPRDDGSDRVIDDYLKQVNLS
ASEIENSNGEVVKTIVDKNGRILTARFVLSSVKGTNEGSQQQRPTK*

FI20725.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:35:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG15293-PC 333 CG15293-PC 1..333 14..346 1717 100 Plus
CG15293-PA 333 CG15293-PA 1..333 14..346 1717 100 Plus
CG31769-PA 311 CG31769-PA 1..295 14..331 226 26.2 Plus