Clone FI20803 Report

Search the DGRC for FI20803

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:208
Well:3
Vector:pOT2
Associated Gene/TranscriptCSN7-RA
Protein status:FI20803.pep: gold
Sequenced Size:1190

Clone Sequence Records

FI20803.complete Sequence

1190 bp assembled on 2012-08-13

GenBank Submission: BT150080.1

> FI20803.complete
GTGCTTGCAAAAATCAAAACAATCCCAAAATTTAAAAACAAATTATCCAA
CTTGAAGTTATCAAAATGACGCAGGACATGCTGCTGGGCAACGAGGAGCC
GAGCAAGAGCAAGGAGACGTTCCTGGAGAAGTTCTGTGTCCTGGCCAAGT
CATCCACCGGCGCCGCTTTGCTGGATGTGATTCGCCAGGCCCTGGAAGCC
CCGAATGTCTTTGTTTTTGGCGAATTACTGGCGGAGCCATCCGTTTTGCA
GCTTAAAGACGGTCCGGACTCCAAGCACTTCGAGACCCTGAACCTATTCG
CATACGGCACATACAAGGAATACCGTGCACAGCCGGAAAAGTTCATCGAG
CTGACTCCTGCCATGCAGAAGAAGCTGCAGCACCTGACTATCGTCTCGCT
GGCCATTAAAGCAAAGAGCATTCCCTATGCCCTGCTGCTCAGCGAACTGG
AGATCGACAACGTCCGCCACTTGGAGGATATCATCATAGAGGCCATCTAC
GCGGACATCATCCACGGAAAGCTGTTCCAGAACACACGAATTTTGGAAGT
GGACTACGCCCAGGGCCGCGACATTCCGCCCGGATACACTGGCCAGATCG
TGGAAACCCTTCAGGCGTGGGTCAACTCCTGCGACAGCGTTTCCAATTGC
ATCGAAATGCAGATTAAGTACGCGAATGCCGAGAAATCTAAAAGGCTGAT
TAACAAAGAGCGCGTGGAACAAGATCTCATCAATCTTAAGAAGGTTTTAA
AGAGCCAGACCTCGGATAGCGATGAGAGCATGCAAATCGACACCCACGGA
CCGGGAACCAGTGGCGGACTGGGTCAATCGGAGCTAAGGAAGAAGCCCTC
CAAGCTGAGGAATCCACGCAGCGCGGCAGTGGGCCTCAAGTTTAGCAAGT
GAGATGAGGACGGTCGAGCGGACGAGGAGTCCGAAGCTGGTTCCAACGGA
GCCAGCCGACGCCCAAGGTCGCAGGCAACTCCACGCGGCACCTGAGGGGC
GGAAACCGCTCGGCTTTCGGAGAAACTCGCCTCCCAGCTAATCCCATCAA
AACTCAGTTCGATTCACCAGATAAAGGCTGTCCTCGTGAAGGATTCCATA
ATTAGCATCAAATTGATCGCCAATAAATAACAAATACAAAACCTGTAATA
ATAGAAACCATACGTCAAAATTCAAAAAAAAAAAAAAAAA

FI20803.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 14:00:18
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 4315806..4316103 876..1173 1490 100 Plus
chr2R 21145070 chr2R 4308880..4309134 250..504 1275 100 Plus
chr2R 21145070 chr2R 4308571..4308821 1..251 1255 100 Plus
chr2R 21145070 chr2R 4315099..4315325 499..725 1105 99.1 Plus
chr2R 21145070 chr2R 4315519..4315672 726..879 770 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 14:00:15
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 8428280..8428578 876..1174 1495 100 Plus
2R 25286936 2R 8421355..8421609 250..504 1275 100 Plus
2R 25286936 2R 8421046..8421296 1..251 1255 100 Plus
2R 25286936 2R 8427573..8427799 499..725 1120 99.6 Plus
2R 25286936 2R 8427993..8428146 726..879 770 100 Plus
Blast to na_te.dros performed on 2019-03-15 14:00:16 has no hits.

FI20803.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 14:01:47 Download gff for FI20803.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 4308571..4308821 1..251 100 -> Plus
chr2R 4308882..4309134 252..504 100 -> Plus
chr2R 4315105..4315325 505..725 99 -> Plus
chr2R 4315519..4315672 726..879 100 -> Plus
chr2R 4315810..4316103 880..1173 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-08-13 14:01:14 Download gff for FI20803.complete
Subject Subject Range Query Range Percent Splice Strand
CSN7-RA 1..837 66..902 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 22:20:24 Download gff for FI20803.complete
Subject Subject Range Query Range Percent Splice Strand
CSN7-RA 1..837 66..902 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:48:26 Download gff for FI20803.complete
Subject Subject Range Query Range Percent Splice Strand
CSN7-RA 1..837 66..902 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-08-13 14:01:14 Download gff for FI20803.complete
Subject Subject Range Query Range Percent Splice Strand
CSN7-RA 59..1231 1..1173 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 22:20:24 Download gff for FI20803.complete
Subject Subject Range Query Range Percent Splice Strand
CSN7-RA 14..1186 1..1173 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:48:26 Download gff for FI20803.complete
Subject Subject Range Query Range Percent Splice Strand
CSN7-RA 14..1186 1..1173 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:01:47 Download gff for FI20803.complete
Subject Subject Range Query Range Percent Splice Strand
2R 8421357..8421609 252..504 100 -> Plus
2R 8421046..8421296 1..251 100 -> Plus
2R 8427579..8427799 505..725 100 -> Plus
2R 8427993..8428146 726..879 100 -> Plus
2R 8428284..8428577 880..1173 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:01:47 Download gff for FI20803.complete
Subject Subject Range Query Range Percent Splice Strand
2R 8421357..8421609 252..504 100 -> Plus
2R 8421046..8421296 1..251 100 -> Plus
2R 8427579..8427799 505..725 100 -> Plus
2R 8427993..8428146 726..879 100 -> Plus
2R 8428284..8428577 880..1173 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:01:47 Download gff for FI20803.complete
Subject Subject Range Query Range Percent Splice Strand
2R 8421357..8421609 252..504 100 -> Plus
2R 8421046..8421296 1..251 100 -> Plus
2R 8427579..8427799 505..725 100 -> Plus
2R 8427993..8428146 726..879 100 -> Plus
2R 8428284..8428577 880..1173 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 22:20:24 Download gff for FI20803.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 4308551..4308801 1..251 100 -> Plus
arm_2R 4308862..4309114 252..504 100 -> Plus
arm_2R 4315084..4315304 505..725 100 -> Plus
arm_2R 4315498..4315651 726..879 100 -> Plus
arm_2R 4315789..4316082 880..1173 100   Plus

FI20803.hyp Sequence

Translation from 65 to 901

> FI20803.hyp
MTQDMLLGNEEPSKSKETFLEKFCVLAKSSTGAALLDVIRQALEAPNVFV
FGELLAEPSVLQLKDGPDSKHFETLNLFAYGTYKEYRAQPEKFIELTPAM
QKKLQHLTIVSLAIKAKSIPYALLLSELEIDNVRHLEDIIIEAIYADIIH
GKLFQNTRILEVDYAQGRDIPPGYTGQIVETLQAWVNSCDSVSNCIEMQI
KYANAEKSKRLINKERVEQDLINLKKVLKSQTSDSDESMQIDTHGPGTSG
GLGQSELRKKPSKLRNPRSAAVGLKFSK*

FI20803.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:35:18
Subject Length Description Subject Range Query Range Score Percent Strand
CSN7-PA 278 CG2038-PA 1..278 1..278 1403 100 Plus

FI20803.pep Sequence

Translation from 65 to 901

> FI20803.pep
MTQDMLLGNEEPSKSKETFLEKFCVLAKSSTGAALLDVIRQALEAPNVFV
FGELLAEPSVLQLKDGPDSKHFETLNLFAYGTYKEYRAQPEKFIELTPAM
QKKLQHLTIVSLAIKAKSIPYALLLSELEIDNVRHLEDIIIEAIYADIIH
GKLFQNTRILEVDYAQGRDIPPGYTGQIVETLQAWVNSCDSVSNCIEMQI
KYANAEKSKRLINKERVEQDLINLKKVLKSQTSDSDESMQIDTHGPGTSG
GLGQSELRKKPSKLRNPRSAAVGLKFSK*

FI20803.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 12:04:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF12354-PA 280 GF12354-PA 1..280 1..278 1370 92.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 12:04:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG23354-PA 278 GG23354-PA 1..278 1..278 1393 95.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 12:04:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH21089-PA 280 GH21089-PA 1..280 1..278 1268 82.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:07:38
Subject Length Description Subject Range Query Range Score Percent Strand
CSN7-PA 278 CG2038-PA 1..278 1..278 1403 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 12:04:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI18691-PA 280 GI18691-PA 1..280 1..278 1228 81.8 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 12:04:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL11218-PA 727 GL11218-PA 504..727 55..278 984 81.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 12:04:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA15197-PA 278 GA15197-PA 1..278 1..278 1245 83.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 12:04:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM21029-PA 278 GM21029-PA 1..278 1..278 1465 99.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 12:04:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD15374-PA 150 GD15374-PA 1..146 1..146 747 98.6 Plus
Dsim\GD10558-PA 162 GD10558-PA 31..162 147..278 712 100 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 12:04:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ21707-PA 280 GJ21707-PA 1..280 1..278 1306 84.6 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 12:04:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK21495-PA 281 GK21495-PA 1..281 1..278 1112 77.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 12:04:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE19194-PA 278 GE19194-PA 1..278 1..278 1455 98.6 Plus