Clone FI20805 Report

Search the DGRC for FI20805

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:208
Well:5
Vector:pOT2
Associated Gene/TranscriptCG17715-RC
Protein status:FI20805.pep: gold
Sequenced Size:1228

Clone Sequence Records

FI20805.complete Sequence

1228 bp assembled on 2012-12-19

GenBank Submission: BT149885.1

> FI20805.complete
TGATAACCACACAAATGGGAATGCATAATATATGTTTCAAAAAATCTCCC
CTCAATTTATTAAACAAAACAAATAAAAATTCTGCACTGATTGGCTGAAC
GGCTTACAGTGAAACAGACACGTTCGAATCACACGAAAATTAATTTTCGA
TCAAGGCACAGACGCGGATATTAATCAGCCTTCCGTGGCGTATTCTGCTC
GGATTATTTGACGTGGGATTGCATTTGCCTAAGAAAGCACTGTAAACCAA
GAGATCGCTAATAATGCGAAATAAATTTCAATCCGCTATTAGGGGCGTAA
CGCGACAATACATTATAAGATCGTGGCCCCGAGGCAGAGAGCTATTGAGG
ACGCAACTGATTATCCCGCCATCTTCTACATCTAGCCCATTTACCTGTAG
AAACTACTCAAAGTTTAGCACACATTTGTCTATGGAGCGGGCGTTGGAGT
TGCTATGCAACCTTGATGACGAGGAACGCGGCAACCTGCGCTCCGCTCTT
GGCAGGCTAGATGCCGACAAGGAAAAAAAATTATACGAGATTGAGACGGC
AGCATCCCCCACGGCAGGTCAATTGTACAGCATTTTCTTTGTAAATGCAG
TGCCGTTTATCGCTTTCGGATTCCTTGACAATTTCATAATGATCATGGCG
GGTGAATACATTGAATATTATTTGGGCCACTTTATAACGCTGTCTACAAT
GGCAGCCGCAGGACTAGGAAACACCATAAGCGATATTTTAGGCATCACTA
TGGCCACCTACGTTGAGAATGGGTGCCAGATATTGGGTCTAAAGCAGCCC
AATTTGACTCCAGCGCAATTTGAATTAAAGTCTAGCAAGCGGTCTTCAAG
TTACGGACGGATTGTCGGGATCACTGTAGGCTGTTTGCTTGGAATGTGTC
CTTTATGGTTTATGGATGAAAAAGCAGATAAGGTGAATGTAAAAGATGAA
ATCCCGAAAAATTAGAAAATGTTTTCCAGCTTGTCAAGAGAACGGATATC
GGAAATAATTTAACATTTTCTTTTCATGTTTTAAAGGGATAAATTTTTTG
TATTATTTATGAATTTTTCGTTCAACAATTTGAATATGTATCAAATGTTT
GTTAGGCAACTTAAAAAACGTACCAAAAGTATCTGAGGTTAACATATGCT
CATCGGCGGTAATTTTCTTCACAAATTTTTAATATTTTTTTTTATTACAT
AATAAATTTATAACAGATTACTCCAATT

FI20805.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 14:05:18
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 22735693..22736072 161..540 1900 100 Plus
chr2L 23010047 chr2L 22740914..22741291 851..1228 1875 99.7 Plus
chr2L 23010047 chr2L 22740653..22740858 650..855 1015 99.5 Plus
chr2L 23010047 chr2L 22735474..22735634 1..161 805 100 Plus
chr2L 23010047 chr2L 22740531..22740599 583..651 345 100 Plus
chr2L 23010047 chr2L 22740439..22740480 541..582 210 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 14:05:16
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 808244..808623 540..161 1900 100 Minus
2L 23513712 2L 22844468..22844847 161..540 1900 100 Plus
2R 25286936 2R 803025..803402 1228..851 1875 99.7 Minus
2L 23513712 2L 22849689..22850066 851..1228 1875 99.7 Plus
2R 25286936 2R 803458..803663 855..650 1030 100 Minus
2L 23513712 2L 22849428..22849633 650..855 1030 100 Plus
2R 25286936 2R 808682..808842 161..1 805 100 Minus
2L 23513712 2L 22844249..22844409 1..161 805 100 Plus
2R 25286936 2R 803717..803785 651..583 345 100 Minus
2L 23513712 2L 22849306..22849374 583..651 345 100 Plus
2R 25286936 2R 803836..803877 582..541 210 100 Minus
2L 23513712 2L 22849214..22849255 541..582 210 100 Plus
Blast to na_te.dros performed 2019-03-15 14:05:16
Subject Length Description Subject Range Query Range Score Percent Strand
Juan 4236 Juan JUAN 4236bp 1694..1818 1067..944 120 60 Minus
gypsy9 5349 gypsy9 GYPSY9 5349bp 685..760 8..83 119 61.8 Plus

FI20805.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 14:06:00 Download gff for FI20805.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 22735474..22735633 1..160 100 -> Plus
chr2L 22735693..22736072 161..540 100 -> Plus
chr2L 22740439..22740480 541..582 100 -> Plus
chr2L 22740531..22740598 583..650 100 -> Plus
chr2L 22740654..22740857 651..854 99 -> Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2013-01-07 15:41:01 Download gff for FI20805.complete
Subject Subject Range Query Range Percent Splice Strand
CG17715-RC 1..702 264..965 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 00:17:48 Download gff for FI20805.complete
Subject Subject Range Query Range Percent Splice Strand
CG17715-RF 1..702 264..965 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:49:50 Download gff for FI20805.complete
Subject Subject Range Query Range Percent Splice Strand
CG17715-RF 1..702 264..965 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-07 15:41:01 Download gff for FI20805.complete
Subject Subject Range Query Range Percent Splice Strand
CG17715-RC 1..1228 1..1228 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:17:48 Download gff for FI20805.complete
Subject Subject Range Query Range Percent Splice Strand
CG17715-RC 30..1257 1..1228 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:49:50 Download gff for FI20805.complete
Subject Subject Range Query Range Percent Splice Strand
CG17715-RC 30..1257 1..1228 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:06:00 Download gff for FI20805.complete
Subject Subject Range Query Range Percent Splice Strand
2R 803025..803398 855..1228 100 <- Minus
2R 803459..803662 651..854 100 <- Minus
2R 803718..803785 583..650 100 <- Minus
2R 803836..803877 541..582 100 <- Minus
2R 808244..808623 161..540 100 <- Minus
2R 808683..808842 1..160 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:06:00 Download gff for FI20805.complete
Subject Subject Range Query Range Percent Splice Strand
2R 803025..803398 855..1228 100 <- Minus
2R 803459..803662 651..854 100 <- Minus
2R 803718..803785 583..650 100 <- Minus
2R 803836..803877 541..582 100 <- Minus
2R 808244..808623 161..540 100 <- Minus
2R 808683..808842 1..160 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:06:00 Download gff for FI20805.complete
Subject Subject Range Query Range Percent Splice Strand
2R 803025..803398 855..1228 100 <- Minus
2R 803459..803662 651..854 100 <- Minus
2R 803718..803785 583..650 100 <- Minus
2R 803836..803877 541..582 100 <- Minus
2R 808244..808623 161..540 100 <- Minus
2R 808683..808842 1..160 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:17:48 Download gff for FI20805.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 22742038..22742105 583..650 100 -> Plus
arm_2L 22736981..22737140 1..160 100 -> Plus
arm_2L 22737200..22737579 161..540 100 -> Plus
arm_2L 22741946..22741987 541..582 100 -> Plus
arm_2L 22742161..22742364 651..854 100 -> Plus
arm_2L 22742425..22742798 855..1228 100   Plus

FI20805.pep Sequence

Translation from 263 to 964

> FI20805.pep
MRNKFQSAIRGVTRQYIIRSWPRGRELLRTQLIIPPSSTSSPFTCRNYSK
FSTHLSMERALELLCNLDDEERGNLRSALGRLDADKEKKLYEIETAASPT
AGQLYSIFFVNAVPFIAFGFLDNFIMIMAGEYIEYYLGHFITLSTMAAAG
LGNTISDILGITMATYVENGCQILGLKQPNLTPAQFELKSSKRSSSYGRI
VGITVGCLLGMCPLWFMDEKADKVNVKDEIPKN*

FI20805.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 12:08:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF24043-PA 276 GF24043-PA 37..262 40..222 705 62.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 12:08:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH10759-PA 1696 GH10759-PA 1515..1696 46..228 769 77.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:36:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG17715-PC 233 CG17715-PC 1..233 1..233 1203 100 Plus
CG17715-PF 233 CG17715-PF 1..233 1..233 1203 100 Plus
CG17715-PB 274 CG17715-PB 1..274 1..233 1150 84.7 Plus
CG17715-PD 274 CG17715-PD 1..274 1..233 1150 84.7 Plus
CG17715-PG 269 CG17715-PG 1..267 1..226 1101 83.1 Plus
CG17715-PH 268 CG17715-PH 1..268 1..233 1100 82.1 Plus
CG17715-PE 135 CG17715-PE 1..96 1..96 477 96.9 Plus
CG17715-PA 135 CG17715-PA 1..96 1..96 477 96.9 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 12:08:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI11672-PA 207 GI11672-PA 1..201 61..221 655 63.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 12:08:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL25632-PA 151 GL25632-PA 2..131 93..222 616 86.2 Plus
Dper\GL25631-PA 119 GL25631-PA 51..100 43..92 208 78 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 12:08:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA25361-PA 222 GA25361-PA 17..202 39..222 616 64.1 Plus
Dpse\GA25360-PA 119 GA25360-PA 51..100 43..92 208 78 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 12:08:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13036-PA 152 GJ13036-PA 19..145 94..220 575 82.7 Plus
Dvir\GJ13025-PA 121 GJ13025-PA 62..120 46..104 160 55.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 12:08:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK14771-PA 87 GK14771-PA 1..84 146..229 367 83.3 Plus
Dwil\GK14770-PA 92 GK14770-PA 47..88 51..92 161 69 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 12:08:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE22675-PA 214 GE22675-PA 111..213 130..232 541 97.1 Plus

FI20805.hyp Sequence

Translation from 263 to 964

> FI20805.hyp
MRNKFQSAIRGVTRQYIIRSWPRGRELLRTQLIIPPSSTSSPFTCRNYSK
FSTHLSMERALELLCNLDDEERGNLRSALGRLDADKEKKLYEIETAASPT
AGQLYSIFFVNAVPFIAFGFLDNFIMIMAGEYIEYYLGHFITLSTMAAAG
LGNTISDILGITMATYVENGCQILGLKQPNLTPAQFELKSSKRSSSYGRI
VGITVGCLLGMCPLWFMDEKADKVNVKDEIPKN*

FI20805.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:39:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG17715-PC 233 CG17715-PC 1..233 1..233 1203 100 Plus
CG17715-PF 233 CG17715-PF 1..233 1..233 1203 100 Plus
CG17715-PB 274 CG17715-PB 1..274 1..233 1150 84.7 Plus
CG17715-PD 274 CG17715-PD 1..274 1..233 1150 84.7 Plus
CG17715-PG 269 CG17715-PG 1..267 1..226 1101 83.1 Plus