Clone FI20807 Report

Search the DGRC for FI20807

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:208
Well:7
Vector:pOT2
Associated Gene/TranscriptCG10477-RA
Protein status:FI20807.pep: gold
Sequenced Size:1039

Clone Sequence Records

FI20807.complete Sequence

1039 bp assembled on 2012-12-19

GenBank Submission: BT149884.1

> FI20807.complete
ATCCAGATGAAGGTTTTTGCTGTCTTGGTCTTGGCAATTGCCACAGTTTC
TGCTGATATCCTGCGCCAGGACACTCCAGTACATCCCCGTGATAGCTCAG
CTGTTCCGTCCATAGATGGTCGCATTACCAATGGAAACAAGGCAGCTGCT
AACCAGTTTCCCTACCAGGTGGGACTCAGTTTTAAAAGCTCGGCTGGCAG
TTGGTGGTGCGGTGGTTCAATAATAGCGAATACATGGGTACTAACTGCTG
CTCATTGCACCAAAGGAGCCTCTTCCGTGACCATCTACTATGGGTCCACC
GTTCGCACTAGTGCCAAACTGAAGAAAAAGGTCTCCAGCTCCAAGTTTGT
GCAGCATGCCGGCTACAATGCGGCTACTTTGCGCAACGACATCTCCCTGA
TCAAGACTCCATCCGTCACTTTTACGGTTTCCATAAATAAGATTGCCCTG
CCCGCCATCGCCAGCAGCTACTCCACCTACGCCGGACAGACTGCAGTGGC
TTCCGGATGGGGCAGGACCTCCGATTCCAGCATTGCCGTCGCCACGAACC
TTCAATACGCACAATTTCAGGTCATTACCAATGCTGTGTGTCAGAAGACC
TTTGGGTCATCTGTGGTCACCAGTGGAGTTATCTGCGTGGAGTCCATCAA
CAAGAAGTCGACCTGTCAGGGCGATTCTGGCGGTCCGTTGGCTTTGAACA
ATAGACTAATTGGTGTGACCTCGTTTGTGTCCTCCAAGGGATGTGAGAAA
AATGCGCCTGCTGGTTTCACCCGCGTCACCAGCTATCTGGATTGGATCAA
GAACCAGTCCGGTGTGTTTTATTAGCCGTAAAGCCACGCAGTCCAGTTTT
CATATTCCTAAAAAGCATTGCCTATTTTTGAGCGGCTATAGGAATGAACC
CAACAGCGCAATCTGAATTGTAACTGATTATGTTTTTTATGTTGGACATA
CCCTTATCTTTTTCTTATCTAAAACAAATATTTTGAGTATTAATTACGTA
ATAAGGAACCTTTTTATTCATTCCATACAAGAAAATACC

FI20807.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 14:05:39
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 6026140..6026913 1039..266 3870 100 Minus
chr3L 24539361 chr3L 6026965..6027230 266..1 1240 97.7 Minus
chr3L 24539361 chr3L 6028295..6028425 382..512 265 80.2 Plus
chr3L 24539361 chr3L 6043745..6043996 277..528 255 73.4 Plus
chr3L 24539361 chr3L 6027975..6028118 118..261 240 77.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 14:05:37
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 6033521..6034294 1039..266 3870 100 Minus
3L 28110227 3L 6034346..6034611 266..1 1330 100 Minus
3L 28110227 3L 6035674..6035804 382..512 265 80.2 Plus
3L 28110227 3L 6035354..6035497 118..261 240 77.8 Plus
3L 28110227 3L 6051106..6051357 277..528 240 73 Plus
Blast to na_te.dros performed 2019-03-15 14:05:38
Subject Length Description Subject Range Query Range Score Percent Strand
S-element 1736 S-element DM33463 1736bp Derived from U33463 (g1006788) (Rel. 47, Last updated, Version 5). 65..179 927..1037 115 58.3 Plus
Dvir\Penelope 4158 Dvir\Penelope DV49102 4158bp Derived from U49102 (Rel. 69, Last updated, Version 4). 1007..1052 638..593 113 71.7 Minus
Penelope 804 Penelope 804bp Derived from AF418572 (AF418572) (Rel. 70, Last updated, Version 3). 562..607 638..593 113 71.7 Minus

FI20807.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 14:07:00 Download gff for FI20807.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 6026140..6026912 267..1039 100 <- Minus
chr3L 6026965..6027230 1..266 97   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2013-01-07 15:41:02 Download gff for FI20807.complete
Subject Subject Range Query Range Percent Splice Strand
CG10477-RA 1..819 7..825 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 00:17:53 Download gff for FI20807.complete
Subject Subject Range Query Range Percent Splice Strand
CG10477-RA 1..819 7..825 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:49:55 Download gff for FI20807.complete
Subject Subject Range Query Range Percent Splice Strand
CG10477-RA 1..819 7..825 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-07 15:41:02 Download gff for FI20807.complete
Subject Subject Range Query Range Percent Splice Strand
CG10477-RA 1..825 1..825 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:17:53 Download gff for FI20807.complete
Subject Subject Range Query Range Percent Splice Strand
CG10477-RA 1..1039 1..1039 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:49:55 Download gff for FI20807.complete
Subject Subject Range Query Range Percent Splice Strand
CG10477-RA 1..1039 1..1039 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:07:00 Download gff for FI20807.complete
Subject Subject Range Query Range Percent Splice Strand
3L 6033521..6034293 267..1039 100 <- Minus
3L 6034346..6034611 1..266 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:07:00 Download gff for FI20807.complete
Subject Subject Range Query Range Percent Splice Strand
3L 6033521..6034293 267..1039 100 <- Minus
3L 6034346..6034611 1..266 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:07:00 Download gff for FI20807.complete
Subject Subject Range Query Range Percent Splice Strand
3L 6033521..6034293 267..1039 100 <- Minus
3L 6034346..6034611 1..266 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:17:53 Download gff for FI20807.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 6026621..6027393 267..1039 100 <- Minus
arm_3L 6027446..6027711 1..266 100   Minus

FI20807.pep Sequence

Translation from 0 to 824

> FI20807.pep
IQMKVFAVLVLAIATVSADILRQDTPVHPRDSSAVPSIDGRITNGNKAAA
NQFPYQVGLSFKSSAGSWWCGGSIIANTWVLTAAHCTKGASSVTIYYGST
VRTSAKLKKKVSSSKFVQHAGYNAATLRNDISLIKTPSVTFTVSINKIAL
PAIASSYSTYAGQTAVASGWGRTSDSSIAVATNLQYAQFQVITNAVCQKT
FGSSVVTSGVICVESINKKSTCQGDSGGPLALNNRLIGVTSFVSSKGCEK
NAPAGFTRVTSYLDWIKNQSGVFY*

FI20807.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 12:08:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF10664-PA 270 GF10664-PA 1..268 3..272 941 65.6 Plus
Dana\GF10663-PA 274 GF10663-PA 20..272 20..272 919 70 Plus
Dana\GF10667-PA 272 GF10667-PA 1..272 3..272 799 62.9 Plus
Dana\GF10666-PA 268 GF10666-PA 1..268 3..272 784 58.6 Plus
Dana\GF10668-PA 270 GF10668-PA 1..267 3..269 748 56.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 12:08:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG14093-PA 272 GG14093-PA 1..272 3..274 1211 89.3 Plus
Dere\GG15305-PA 270 GG15305-PA 1..270 3..272 973 69.3 Plus
Dere\GG15308-PA 274 GG15308-PA 1..274 3..274 955 70.1 Plus
Dere\GG14094-PA 272 GG14094-PA 1..270 3..272 919 64.8 Plus
Dere\GG15307-PA 270 GG15307-PA 1..268 3..270 708 55.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 12:08:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH15025-PA 274 GH15025-PA 1..274 3..274 845 65 Plus
Dgri\GH15024-PA 274 GH15024-PA 1..274 3..274 831 64.2 Plus
Dgri\GH15027-PA 274 GH15027-PA 1..274 3..274 817 62.8 Plus
Dgri\GH15022-PA 272 GH15022-PA 1..272 3..274 685 53.1 Plus
Dgri\GH16447-PA 265 GH16447-PA 1..264 3..274 671 50 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:08:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG10477-PB 272 CG10477-PB 1..272 3..274 1385 100 Plus
CG10477-PA 272 CG10477-PA 1..272 3..274 1385 100 Plus
Jon65Aiii-PA 274 CG6483-PA 1..274 3..274 972 67.5 Plus
yip7-PA 270 CG6457-PA 1..270 3..272 950 66.7 Plus
Jon65Aiv-PA 271 CG6467-PA 4..271 8..272 767 56 Plus
Jon25Bii-PB 276 CG8869-PB 1..276 3..274 660 50.7 Plus
Jon25Bii-PA 276 CG8869-PA 1..276 3..274 660 50.7 Plus
Jon25Bi-PB 266 CG8867-PB 1..265 3..274 644 49.6 Plus
Jon99Cii-PA 265 CG31034-PA 1..265 3..274 632 48.5 Plus
Jon99Ciii-PB 265 CG31362-PB 1..265 3..274 632 48.5 Plus
Jon99Ciii-PA 265 CG31362-PA 1..265 3..274 632 48.5 Plus
Jon99Fii-PA 267 CG2229-PA 1..267 3..274 627 49.6 Plus
Jon99Fi-PA 267 CG18030-PA 1..267 3..274 625 49.6 Plus
Jon99Ci-PA 272 CG31039-PA 1..272 3..274 610 45.1 Plus
Jon44E-PB 271 CG8579-PB 1..271 3..274 600 45.3 Plus
Jon44E-PA 271 CG8579-PA 1..271 3..274 600 45.3 Plus
Jon66Ci-PA 260 CG7118-PA 1..259 3..274 580 45.1 Plus
Jon65Ai-PB 262 CG10475-PB 1..262 3..274 567 45 Plus
Jon65Ai-PA 262 CG10475-PA 1..262 3..274 567 45 Plus
Jon25Biii-PA 258 CG8871-PA 1..258 3..274 564 45.8 Plus
Jon66Cii-PA 262 CG7170-PA 1..261 3..274 548 43.9 Plus
Jon65Aii-PA 259 CG6580-PA 1..259 3..274 540 43.3 Plus
CG10472-PA 290 CG10472-PA 1..285 3..272 531 42.7 Plus
CG7542-PB 270 CG7542-PB 15..262 33..268 479 42.2 Plus
CG7542-PA 270 CG7542-PA 15..262 33..268 479 42.2 Plus
Jon74E-PC 271 CG6298-PC 28..270 38..274 478 41.6 Plus
CG6592-PA 438 CG6592-PA 122..363 41..272 438 38.7 Plus
CG3088-PA 252 CG3088-PA 26..252 39..274 430 37 Plus
CG11529-PA 287 CG11529-PA 24..260 29..271 422 40.6 Plus
CG8952-PA 276 CG8952-PA 6..274 2..272 419 36.8 Plus
CG8329-PA 259 CG8329-PA 3..258 4..274 416 39.7 Plus
CG18179-PA 268 CG18179-PA 1..268 3..274 399 37.5 Plus
CG18180-PA 264 CG18180-PA 33..264 39..274 393 39.6 Plus
CG10469-PA 267 CG10469-PA 23..264 41..271 343 37.3 Plus
alphaTry-PA 256 CG18444-PA 24..249 35..266 339 36.6 Plus
CG30025-PA 253 CG30025-PA 24..253 35..270 330 36.4 Plus
CG6462-PA 319 CG6462-PA 66..317 31..272 328 34.1 Plus
gammaTry-PA 253 CG30028-PA 24..249 35..266 326 36.6 Plus
deltaTry-PA 253 CG12351-PA 24..249 35..266 326 36.6 Plus
CG30031-PA 253 CG30031-PA 24..249 35..266 326 36.6 Plus
betaTry-PB 253 CG18211-PB 24..253 35..270 321 35.4 Plus
betaTry-PA 253 CG18211-PA 24..253 35..270 321 35.4 Plus
CG8299-PA 260 CG8299-PA 23..259 37..273 321 34.7 Plus
Ser6-PA 259 CG2071-PA 23..259 33..272 313 35.3 Plus
CG17571-PB 258 CG17571-PB 22..251 36..266 305 36.2 Plus
CG17571-PA 258 CG17571-PA 22..251 36..266 305 36.2 Plus
CG1304-PA 260 CG1304-PA 4..259 10..272 305 34.2 Plus
epsilonTry-PA 256 CG18681-PA 1..250 3..267 301 33 Plus
CG3355-PA 314 CG3355-PA 75..306 41..270 299 33.8 Plus
CG16749-PA 265 CG16749-PA 28..258 40..267 291 33.5 Plus
Ser8-PA 260 CG4812-PA 30..253 37..266 281 32.9 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 12:08:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI16677-PA 274 GI16677-PA 1..274 3..274 883 67.9 Plus
Dmoj\GI12958-PA 279 GI12958-PA 1..277 3..272 728 52.9 Plus
Dmoj\GI16676-PA 273 GI16676-PA 1..273 3..274 717 53.3 Plus
Dmoj\GI16681-PA 269 GI16681-PA 1..269 3..274 636 46.7 Plus
Dmoj\GI16704-PA 264 GI16704-PA 1..263 3..274 618 50.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 12:08:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL15539-PA 272 GL15539-PA 1..270 3..272 896 65.2 Plus
Dper\GL15538-PA 272 GL15538-PA 1..270 3..272 893 68.1 Plus
Dper\GL25036-PA 263 GL25036-PA 1..261 3..272 709 51.8 Plus
Dper\GL15536-PA 274 GL15536-PA 34..274 37..274 696 58.1 Plus
Dper\GL26494-PA 276 GL26494-PA 1..276 3..274 673 52.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 12:08:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA19627-PA 274 GA19627-PA 1..274 3..274 900 68.2 Plus
Dpse\GA19610-PA 272 GA19610-PA 1..270 3..272 894 64.8 Plus
Dpse\GA23594-PA 263 GA23594-PA 1..261 3..272 709 51.8 Plus
Dpse\GA19618-PA 274 GA19618-PA 34..274 37..274 694 58.1 Plus
Dpse\GA21380-PA 276 GA21380-PA 1..276 3..274 674 52.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 12:08:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM13877-PA 272 GM13877-PA 1..272 3..274 1312 92.6 Plus
Dsec\GM14741-PA 274 GM14741-PA 1..274 3..274 957 67.5 Plus
Dsec\GM14740-PA 711 GM14740-PA 1..268 3..270 903 66.8 Plus
Dsec\GM14738-PA 254 GM14738-PA 1..253 3..273 856 62.7 Plus
Dsec\GM13878-PA 230 GM13878-PA 1..229 3..258 716 57.4 Plus
Dsec\GM14740-PA 711 GM14740-PA 543..711 106..272 459 53.3 Plus
Dsec\GM14740-PA 711 GM14740-PA 325..543 41..249 270 34.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 12:08:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD13159-PA 272 GD13159-PA 1..272 3..274 1262 93.4 Plus
Dsim\GD13160-PA 272 GD13160-PA 1..271 3..273 1089 76.4 Plus
Dsim\GD13918-PA 272 GD13918-PA 1..270 3..272 1007 71.1 Plus
Dsim\GD13919-PA 455 GD13919-PA 182..454 1..273 985 68.5 Plus
Dsim\GD13923-PA 274 GD13923-PA 1..274 3..274 968 67.9 Plus
Dsim\GD13919-PA 455 GD13919-PA 1..200 3..202 682 66.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 12:08:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ12930-PA 274 GJ12930-PA 1..274 3..274 863 68.2 Plus
Dvir\GJ12929-PA 255 GJ12929-PA 1..255 3..274 861 66.4 Plus
Dvir\GJ12928-PA 274 GJ12928-PA 1..274 3..274 760 59.2 Plus
Dvir\GJ20009-PA 271 GJ20009-PA 1..271 3..274 723 54.3 Plus
Dvir\GJ13101-PA 249 GJ13101-PA 15..249 39..272 680 54.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 12:08:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK16889-PA 275 GK16889-PA 1..275 3..274 948 68.7 Plus
Dwil\GK11558-PA 263 GK11558-PA 1..263 3..274 883 63.1 Plus
Dwil\GK11557-PA 266 GK11557-PA 17..266 28..274 861 66.8 Plus
Dwil\GK16890-PA 277 GK16890-PA 1..275 3..272 794 57.5 Plus
Dwil\GK16888-PA 274 GK16888-PA 1..274 3..274 741 58.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 12:08:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE21529-PA 274 GE21529-PA 1..274 3..274 1018 70.8 Plus
Dyak\GE21525-PA 272 GE21525-PA 1..270 3..272 964 68.9 Plus
Dyak\yip7-PA 272 GE21526-PA 1..272 3..274 953 68.8 Plus
Dyak\GE20517-PA 272 GE20517-PA 1..270 3..272 935 65.2 Plus
Dyak\GE21528-PA 273 GE21528-PA 1..271 3..272 766 58.2 Plus

FI20807.hyp Sequence

Translation from 0 to 824

> FI20807.hyp
IQMKVFAVLVLAIATVSADILRQDTPVHPRDSSAVPSIDGRITNGNKAAA
NQFPYQVGLSFKSSAGSWWCGGSIIANTWVLTAAHCTKGASSVTIYYGST
VRTSAKLKKKVSSSKFVQHAGYNAATLRNDISLIKTPSVTFTVSINKIAL
PAIASSYSTYAGQTAVASGWGRTSDSSIAVATNLQYAQFQVITNAVCQKT
FGSSVVTSGVICVESINKKSTCQGDSGGPLALNNRLIGVTSFVSSKGCEK
NAPAGFTRVTSYLDWIKNQSGVFY*

FI20807.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:39:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG10477-PB 272 CG10477-PB 1..272 3..274 1385 100 Plus
CG10477-PA 272 CG10477-PA 1..272 3..274 1385 100 Plus
Jon65Aiii-PA 274 CG6483-PA 1..274 3..274 972 67.5 Plus
yip7-PA 270 CG6457-PA 1..270 3..272 950 66.7 Plus
Jon65Aiv-PA 271 CG6467-PA 4..271 8..272 767 56 Plus