Clone FI21029 Report

Search the DGRC for FI21029

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:210
Well:29
Vector:pOT2
Associated Gene/TranscriptNufip-RA
Protein status:FI21029.pep: gold
Sequenced Size:1609

Clone Sequence Records

FI21029.complete Sequence

1609 bp assembled on 2013-03-19

GenBank Submission: BT150094.1

> FI21029.complete
ACGAAATGGAAGAAAAGGTTCTGCCGAAATTCGTATTACCGTCTCCAAAG
TTCGGCAAGCCCAATGGATCCACCACATCCAATCACCTCTACCTGACCCC
CAGCGGGATGACCCTGCTGCCGCGCTCCAAGCAACCGCCGCCCATGTACG
GTGCACGAGGATCAACAGTGCCAGCTAAATATCTGCACCAAGAACAAAGC
AGCCCAGTGAGCGTACCTGCATCCCCGCCAGTTTACCATTCTCCTCCGCG
ACCGGAATTTTGTCACACATGTGTCATGGAGCTGGCCAACTCTCAGGATA
TGAAACTCCACCTGGAGCAACACGAGTTCTGCCCTGCCGATGACTGCGAC
TTTGCGGCGCTCCACAACATCCTGGAACGTCACATAGAATCCAATCACAT
CACAGGAACCTACGTAAAGGTAAAGAAAGTTTGGTCCGAGGAAGAATTGG
CCGCTTGGAGGGCAGAACGAAGAAAAAAATTTCCCACTGCGGCCAATGTT
GAGCTGGCTAGATTAGCCAAGGAACAGCGAATTAAACGCGGAGAGCGCCT
GGAGGCTTCGAAATCTCGCTTCGGAAACCGGGAAGATCGCCAACGGACGC
GAGGAGGACCCCAGGGAGATCACAAAGTTCGTTTCGATCCGAAAAACAAG
AAAAAGAGATGTGCCAAAGGGAAAGCCAATGAAAAGAAGAAAAAACGTGT
TGGTACTGATAAAGCAAACGAAGCTTTGAAGCAGAAAGAAACTAATGAAG
ATAAAAAAGAAGAGGAAGTTAATTTGTGCTCCCTGGGAAATGCTAAATTT
GGAGGAACTGGACAAATGCCGGAGTACCAGCACTTTAAGGCAAAAGTTCA
AAAGAAGGATAATGCTTTGTCTAGCTTTCTTGGAATGTACGGGTCAGATA
GTGACGAAGAAAGTGAAGCTGAGAGTGATGATCAGAATACAGCAGACTGC
AGTAAACAAATCCCAGCACAAGTAGAGAGCTCCCAAAGTATGCCATCTGA
AATCACAGAAATGGGTCCAGCCCTTGAGGCTTCAAATACACCTAACTCTG
TTGATAATACTCAAACTTGTGAAGACTTTACACCTATGTTGGAAATGACA
TCATCAGACCAAGTGCCGCGAGAAATAAGCAACATTAGTCAAATAACTAC
ATCTAACTCAGAGCCTGCCAAGGAAGATGGCTCCTCCGACGAAGGACCGG
ATGAAGAGCCCTTCCAGCGAGTGACCGAAACTATAACAGCGTCAGATCCA
GTCAAACCACCTCCTGAACCAATGGAACCGAAGCCACAAACTGCACCCAA
AAGAGCAGCTCCAAAGCGAATTTATGGCTTGAACTACAAGAGAGCGCGCA
AGCAAACCCCGAACACTATGTTGTCGAAACTATTAGAATCCGATATACGC
CATGAAAGAAATGTCCTGCTGCAGTGCGTGCGACATGTTTGCGAGAGAAA
TTTCTTTGGCATTGGTCAAGCTAAACCAAATCAAGAAACGTTGGTTACCA
CTTGTGATAAAACCGTTGATTCAACACCGGATGCATTATAACTTTAGCTT
TTAAGTTAGGCAAATAAAGTACAAATAGTAGTATGCAAAAAAAAAAAAAA
AAAAAAAAA

FI21029.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 14:11:48
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 18736241..18737348 1586..479 5345 98.8 Minus
chr3L 24539361 chr3L 18737406..18737686 478..198 1390 99.6 Minus
chr3L 24539361 chr3L 18737747..18737943 197..1 970 99.5 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 14:11:46
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 18746608..18747718 1589..479 5540 99.9 Minus
3L 28110227 3L 18747776..18748056 478..198 1375 99.3 Minus
3L 28110227 3L 18748117..18748313 197..1 985 100 Minus
Blast to na_te.dros performed on 2019-03-15 14:11:46 has no hits.

FI21029.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 14:12:42 Download gff for FI21029.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 18736241..18737348 479..1586 98 <- Minus
chr3L 18737406..18737686 198..478 99 <- Minus
chr3L 18737747..18737943 1..197 99   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2013-04-19 14:57:47 Download gff for FI21029.complete
Subject Subject Range Query Range Percent Splice Strand
Nufip-RA 1..1536 6..1541 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 00:22:53 Download gff for FI21029.complete
Subject Subject Range Query Range Percent Splice Strand
Nufip-RA 1..1536 6..1541 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:54:03 Download gff for FI21029.complete
Subject Subject Range Query Range Percent Splice Strand
Nufip-RA 1..1536 6..1541 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-19 14:57:47 Download gff for FI21029.complete
Subject Subject Range Query Range Percent Splice Strand
Nufip-RA 25..1610 1..1586 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:22:53 Download gff for FI21029.complete
Subject Subject Range Query Range Percent Splice Strand
Nufip-RA 55..1640 1..1586 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:54:03 Download gff for FI21029.complete
Subject Subject Range Query Range Percent Splice Strand
Nufip-RA 55..1640 1..1586 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:12:42 Download gff for FI21029.complete
Subject Subject Range Query Range Percent Splice Strand
3L 18748117..18748313 1..197 100   Minus
3L 18747776..18748056 198..478 99 <- Minus
3L 18746611..18747718 479..1586 99 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:12:42 Download gff for FI21029.complete
Subject Subject Range Query Range Percent Splice Strand
3L 18748117..18748313 1..197 100   Minus
3L 18747776..18748056 198..478 99 <- Minus
3L 18746611..18747718 479..1586 99 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:12:42 Download gff for FI21029.complete
Subject Subject Range Query Range Percent Splice Strand
3L 18748117..18748313 1..197 100   Minus
3L 18747776..18748056 198..478 99 <- Minus
3L 18746611..18747718 479..1586 99 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:22:53 Download gff for FI21029.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 18739711..18740818 479..1586 99 <- Minus
arm_3L 18740876..18741156 198..478 99 <- Minus
arm_3L 18741217..18741413 1..197 100   Minus

FI21029.hyp Sequence

Translation from 2 to 1540

> FI21029.hyp
EMEEKVLPKFVLPSPKFGKPNGSTTSNHLYLTPSGMTLLPRSKQPPPMYG
ARGSTVPAKYLHQEQSSPVSVPASPPVYHSPPRPEFCHTCVMELANSQDM
KLHLEQHEFCPADDCDFAALHNILERHIESNHITGTYVKVKKVWSEEELA
AWRAERRKKFPTAANVELARLAKEQRIKRGERLEASKSRFGNREDRQRTR
GGPQGDHKVRFDPKNKKKRCAKGKANEKKKKRVGTDKANEALKQKETNED
KKEEEVNLCSLGNAKFGGTGQMPEYQHFKAKVQKKDNALSSFLGMYGSDS
DEESEAESDDQNTADCSKQIPAQVESSQSMPSEITEMGPALEASNTPNSV
DNTQTCEDFTPMLEMTSSDQVPREISNISQITTSNSEPAKEDGSSDEGPD
EEPFQRVTETITASDPVKPPPEPMEPKPQTAPKRAAPKRIYGLNYKRARK
QTPNTMLSKLLESDIRHERNVLLQCVRHVCERNFFGIGQAKPNQETLVTT
CDKTVDSTPDAL*

FI21029.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:43:56
Subject Length Description Subject Range Query Range Score Percent Strand
Nufip-PA 511 CG4076-PA 1..511 2..512 2699 100 Plus

FI21029.pep Sequence

Translation from 2 to 1540

> FI21029.pep
EMEEKVLPKFVLPSPKFGKPNGSTTSNHLYLTPSGMTLLPRSKQPPPMYG
ARGSTVPAKYLHQEQSSPVSVPASPPVYHSPPRPEFCHTCVMELANSQDM
KLHLEQHEFCPADDCDFAALHNILERHIESNHITGTYVKVKKVWSEEELA
AWRAERRKKFPTAANVELARLAKEQRIKRGERLEASKSRFGNREDRQRTR
GGPQGDHKVRFDPKNKKKRCAKGKANEKKKKRVGTDKANEALKQKETNED
KKEEEVNLCSLGNAKFGGTGQMPEYQHFKAKVQKKDNALSSFLGMYGSDS
DEESEAESDDQNTADCSKQIPAQVESSQSMPSEITEMGPALEASNTPNSV
DNTQTCEDFTPMLEMTSSDQVPREISNISQITTSNSEPAKEDGSSDEGPD
EEPFQRVTETITASDPVKPPPEPMEPKPQTAPKRAAPKRIYGLNYKRARK
QTPNTMLSKLLESDIRHERNVLLQCVRHVCERNFFGIGQAKPNQETLVTT
CDKTVDSTPDAL*

FI21029.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 12:14:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF10807-PA 501 GF10807-PA 1..491 2..489 1334 55.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 12:14:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG15725-PA 519 GG15725-PA 1..519 2..512 2103 81.1 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 12:14:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH17195-PA 438 GH17195-PA 1..438 36..507 896 44.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:08:21
Subject Length Description Subject Range Query Range Score Percent Strand
Nufip-PA 511 CG4076-PA 1..511 2..512 2699 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 12:14:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI13963-PA 404 GI13963-PA 4..376 9..419 690 41.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 12:14:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL25260-PA 473 GL25260-PA 1..462 2..488 1233 56.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 12:14:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA17939-PA 472 GA17939-PA 1..461 2..488 1248 56.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 12:14:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM14922-PA 518 GM14922-PA 1..518 2..512 2174 89 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 12:14:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD12328-PA 455 GD12328-PA 15..455 78..512 1818 87.4 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 12:14:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13744-PA 368 GJ13744-PA 35..361 127..490 652 45.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 12:14:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK10761-PA 422 GK10761-PA 1..291 2..298 823 57.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 12:14:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\Nufip-PA 520 GE22056-PA 1..520 2..512 2112 78.3 Plus