Clone FI21074 Report

Search the DGRC for FI21074

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:210
Well:74
Vector:pOT2
Associated Gene/TranscriptNuf2-RA
Protein status:FI21074.pep: gold
Sequenced Size:1290

Clone Sequence Records

FI21074.complete Sequence

1290 bp assembled on 2013-03-19

> FI21074.complete
CTCGTGCCGCTCGTGCCGCAAAAACTGCCATTAAAGATTAAAACTCTGGA
TTAAATGGCGTTATCAGTCGAAATTGAAAGGGTAATGGACCAGGGCAACT
GCCTGATGCCCGACATCAATATCTGCCAAAGCGACTTGGCCAATCCCACC
GAGCCCATTGTCACCAAGATCATGGTGCACTATCTGCGGAGTTTCGGCTT
TCGCCTGGAGCCGCCCTATAAAATTGGCACCGAACTCGGTCACTCGTCGC
GGGAGGCGCGCGTCTTTCTCATCCGAGTGTGCCGCCAAGTGGAGCGCATC
GTCCAGATCAGCTTTCCCAACAAGACCTACACCTATATGGACATAATTAA
ACCAGCTGTTAAAAAAACGCTCGCCACTCTGAGCTACCTTTTTAACCACC
TGGCCTACTACAAGGTGTTCAAAAAGAAGGTGCTGGGACCTGTAGAGGAG
GCCATTAAGCTAAAGGATTCGCTGACCGCCGAGGTGAAGGCCAAAAGTCA
ACAGCTGGAGCAATGCAGTCAGAAGACGAAGGATTGCGAAGTGGCCATAA
ACAAACTCAAGAAAGATTTGCAGGATACTCAAGCAAAGCTTCTACCTTTG
AAGAAGTCCTGTAGCGAGCATGAAAACACTCTGGAACTCATTGAGCAGCA
GCAGGGTGAGCTGGACAAACGCATCGGTCACTGGGAACAGCTAGTGGTGG
AGGACAGTCAAGTGACAGAGCTGCGAGAGAAAATTAAGAGCGCATCGTCG
CATGTCGAGAGCTGCAAGACGGAGCTGGCCAGTAAAAAACAGGTGACGAA
TGAACATCGCCGGATGATCGAAAACAGTCAACATATAGCCACCGCTTTGG
AGAAGGCCACGGCTGTGCTTTCGCTGTGCAAGGTGGATGATTACAAAGAG
AGCTTCAAGCAGCTGGAGGCAGTGGAAAAGCAGTTGCCCACCTGTAAAGT
TAATTATCAGAAGCTCCTTCAGGATGCAGAGGCCAAGAAACAGGAACTCG
CTCTTTGTGCACATCGGTACGAGGAAAGAAACCAGGAAAACGATGCCGAG
AATCACAAGGTGCAAAATGAACTCAAAAAGCTGCAGGTCGATGTTGAGGA
TCGCAAGAAACGTCTGGAGGATCTGAATAATCACTTGATCGAGCTAGACC
AGCAAAATTTGGAGCAAGATCAGCTATATGCCATATTAAATGAGCAAATC
CATGAGGTTCTCGGACAAAACTGGCAGATGAATTCCACTTAATATACTGA
TTTTATTCTATAAATGCAAAACAAAAAAAAAAAAAAAAAA

FI21074.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 14:08:19
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 7063490..7064033 1272..729 2690 99.6 Minus
chr2L 23010047 chr2L 7064090..7064465 729..354 1835 99.2 Minus
chr2L 23010047 chr2L 7064523..7064859 355..19 1610 98.5 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 14:08:17
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 7064430..7064974 1273..729 2695 99.6 Minus
2L 23513712 2L 7065031..7065406 729..354 1820 98.9 Minus
2L 23513712 2L 7065465..7065801 355..19 1610 98.5 Minus
Blast to na_te.dros performed on 2019-03-15 14:08:17 has no hits.

FI21074.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 14:09:02 Download gff for FI21074.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 7063490..7064033 729..1272 99 <- Minus
chr2L 7064091..7064463 356..728 99 <- Minus
chr2L 7064523..7064868 12..355 97   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2013-03-19 12:07:35 Download gff for FI21074.complete
Subject Subject Range Query Range Percent Splice Strand
Nuf2-RA 1..1188 55..1242 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 00:20:27 Download gff for FI21074.complete
Subject Subject Range Query Range Percent Splice Strand
Nuf2-RA 1..1188 55..1242 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:51:52 Download gff for FI21074.complete
Subject Subject Range Query Range Percent Splice Strand
Nuf2-RA 1..1188 55..1242 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-03-19 12:07:35 Download gff for FI21074.complete
Subject Subject Range Query Range Percent Splice Strand
Nuf2-RA 24..1286 12..1272 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:20:27 Download gff for FI21074.complete
Subject Subject Range Query Range Percent Splice Strand
Nuf2-RA 28..1290 12..1272 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:51:52 Download gff for FI21074.complete
Subject Subject Range Query Range Percent Splice Strand
Nuf2-RA 28..1290 12..1272 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:09:02 Download gff for FI21074.complete
Subject Subject Range Query Range Percent Splice Strand
2L 7064431..7064974 729..1272 99 <- Minus
2L 7065032..7065404 356..728 98 <- Minus
2L 7065465..7065810 12..355 97   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:09:02 Download gff for FI21074.complete
Subject Subject Range Query Range Percent Splice Strand
2L 7064431..7064974 729..1272 99 <- Minus
2L 7065032..7065404 356..728 98 <- Minus
2L 7065465..7065810 12..355 97   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:09:02 Download gff for FI21074.complete
Subject Subject Range Query Range Percent Splice Strand
2L 7064431..7064974 729..1272 99 <- Minus
2L 7065032..7065404 356..728 98 <- Minus
2L 7065465..7065810 12..355 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:20:27 Download gff for FI21074.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 7064431..7064974 729..1272 99 <- Minus
arm_2L 7065032..7065404 356..728 98 <- Minus
arm_2L 7065465..7065810 12..355 97   Minus

FI21074.pep Sequence

Translation from 54 to 1241

> FI21074.pep
MALSVEIERVMDQGNCLMPDINICQSDLANPTEPIVTKIMVHYLRSFGFR
LEPPYKIGTELGHSSREARVFLIRVCRQVERIVQISFPNKTYTYMDIIKP
AVKKTLATLSYLFNHLAYYKVFKKKVLGPVEEAIKLKDSLTAEVKAKSQQ
LEQCSQKTKDCEVAINKLKKDLQDTQAKLLPLKKSCSEHENTLELIEQQQ
GELDKRIGHWEQLVVEDSQVTELREKIKSASSHVESCKTELASKKQVTNE
HRRMIENSQHIATALEKATAVLSLCKVDDYKESFKQLEAVEKQLPTCKVN
YQKLLQDAEAKKQELALCAHRYEERNQENDAENHKVQNELKKLQVDVEDR
KKRLEDLNNHLIELDQQNLEQDQLYAILNEQIHEVLGQNWQMNST*

FI21074.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 12:14:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF24482-PA 407 GF24482-PA 10..402 6..391 885 45.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 12:14:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG23554-PA 395 GG23554-PA 1..395 1..395 1841 87.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 12:14:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH11683-PA 394 GH11683-PA 6..306 7..305 461 36.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:00:21
Subject Length Description Subject Range Query Range Score Percent Strand
Nuf2-PA 395 CG8902-PA 1..395 1..395 2020 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 12:14:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI17130-PA 396 GI17130-PA 8..326 7..318 569 38.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 12:14:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL16266-PA 403 GL16266-PA 6..399 2..389 810 43.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 12:14:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA27724-PA 384 GA27724-PA 6..380 2..389 686 39.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 12:14:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM13638-PA 380 GM13638-PA 1..380 11..390 1925 95.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 12:14:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD22514-PA 395 GD22514-PA 1..395 1..395 2014 96.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 12:14:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ16166-PA 399 GJ16166-PA 8..326 7..318 559 37.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 12:14:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK24741-PA 407 GK24741-PA 1..399 1..391 533 33.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 12:14:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE18378-PA 385 GE18378-PA 1..385 11..395 1817 88.8 Plus

FI21074.hyp Sequence

Translation from 54 to 1241

> FI21074.hyp
MALSVEIERVMDQGNCLMPDINICQSDLANPTEPIVTKIMVHYLRSFGFR
LEPPYKIGTELGHSSREARVFLIRVCRQVERIVQISFPNKTYTYMDIIKP
AVKKTLATLSYLFNHLAYYKVFKKKVLGPVEEAIKLKDSLTAEVKAKSQQ
LEQCSQKTKDCEVAINKLKKDLQDTQAKLLPLKKSCSEHENTLELIEQQQ
GELDKRIGHWEQLVVEDSQVTELREKIKSASSHVESCKTELASKKQVTNE
HRRMIENSQHIATALEKATAVLSLCKVDDYKESFKQLEAVEKQLPTCKVN
YQKLLQDAEAKKQELALCAHRYEERNQENDAENHKVQNELKKLQVDVEDR
KKRLEDLNNHLIELDQQNLEQDQLYAILNEQIHEVLGQNWQMNST*

FI21074.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:43:42
Subject Length Description Subject Range Query Range Score Percent Strand
Nuf2-PA 395 CG8902-PA 1..395 1..395 2020 100 Plus