Clone FI21252 Report

Search the DGRC for FI21252

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:212
Well:52
Vector:pOT2|pOTB7_DraIII
Associated Gene/TranscriptCG3770-RA
Protein status:FI21252.pep: gold
Sequenced Size:1399

Clone Sequence Records

FI21252.complete Sequence

1399 bp assembled on 2013-06-21

GenBank Submission: BT150127.1

> FI21252.complete
TCGGAGTCGGCGAGAGATGACGCTGGCGAGGAACGGCAGCAGACACGCCT
GCGCGAACAGAAGCTCAGATCCAAAGTTCCAGAGTGTGGAATAAAGTTGC
CAAATAGCTGCAGCCGCTTGGGGGATTAGCGAAAACGCCATCGAGGCAGA
GTTATTTTCCCGCTAGACTCTATTTCCCTTCGCTTCGACGTCAGCTGCGA
ATTTTGTTCTTGACAGAGCCGCGGACTGCGCGGTCTACCGCCTCGCCCTC
GCCCTCGTGCTCCCCCTATCCCACAGTCAACCTCCGCTCGCGTGTGAGTG
TGGGGTGAATAACATAAAACAGACGGCAGAAAGGCACCGCATAACAGCGA
GCGGCGAAAACATAAAATAAACAATTCCATTTCGGGCTGGTCAGCTGGGA
GGAAGTTCTGGTCTGGCCCCGCGCTGCTGGTGGTGGCGAGTGGTGCGACG
GTGGTGGTGGGTGACGGCAAAGTGGGTGTGGGATGTGCGTGCCCAGACAA
AGTAAGAGCGCTTAGAGTCTATTATCTATCCGGCAAGTGCTGACGCGTTG
CGATCGCCCGTCGTCGATCGCTAAATCTGTGTACTCCGAAAAATCTGGTG
CATCGAAATGTGCTACGTTATTATCACCATCGCCAGTCTGGTGTGGTTTC
TCTGTTCGCTGGTGGCCGACATGCTCTTTGCTGTGGCCCTGGTCACGCCC
AGGTGGCTGGTGGGCCCCGCCCAAGGAACAGACTCCACCGCCAGCTCTCA
CCACCAATCCTCGGTGGGCATCTACACGCGCTGCAAGGTCATGCAGGAGG
GCGGATTCCAATGCGGCCGCTTCGACTTGGACGGACTGGCCACGGACAGT
AGCGTTTACCCCAACGAATGGAAAGCGGCAATGTTCTTCGTCATGCTGGG
ATTTAGTCTACTCTCTGTAACGGTGATCCTGACCCTGATCACCTGCTGCC
GCCAGTCGGCCTGTGGCAAGAGCATACACAACATGACGGCCTGCGCCCAG
GTCGTAGCAGGAATATGTATGATGTTGGGTCTATTTCTGCATCCGATGGG
ATGGCGAGCGAACCGGATTCAACGTCTATGCGGCATGGATGCCGAACCCT
TTTACCCCGCCGACTGTAGCATAGGAGTTTCATTCTACTGCGGAATCATT
GGGGTACTCCTAACATTTACTGCCGCCGGTATAAGCCTAAAGGCAGAGTC
TTCCAATATGCGAACTCGAGTTCGCAGACGCGTGGAGGCGGGCAGTAAAC
TGGTCTGTATTCCGTAGCTGCCTTTGAATACAATAAGAACACTATCTGAC
TTGGAGCGAGCATACTTAACTTCATTCTCGAATTAAATTTATCATTAGCA
TAAATAAACTTTTAACATTCTACAGTATAAAAAAAAAAAAAAAAAAAAA

FI21252.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 14:31:08
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 20831103..20832113 1..1011 5025 99.8 Plus
chr2R 21145070 chr2R 20832330..20832585 1123..1378 1280 100 Plus
chr2R 21145070 chr2R 20832166..20832282 1009..1125 585 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 14:31:06
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 24945154..24946164 1..1011 5025 99.8 Plus
2R 25286936 2R 24946381..24946637 1123..1379 1285 100 Plus
2R 25286936 2R 24946217..24946333 1009..1125 585 100 Plus
Blast to na_te.dros performed on 2019-03-15 14:31:06 has no hits.

FI21252.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 14:32:08 Download gff for FI21252.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 20831103..20832112 1..1010 99 -> Plus
chr2R 20832168..20832281 1011..1124 100 -> Plus
chr2R 20832332..20832585 1125..1378 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2013-06-21 12:36:15 Download gff for FI21252.complete
Subject Subject Range Query Range Percent Splice Strand
CG3770-RA 1..660 608..1267 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 00:32:14 Download gff for FI21252.complete
Subject Subject Range Query Range Percent Splice Strand
CG3770-RA 1..660 608..1267 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:00:53 Download gff for FI21252.complete
Subject Subject Range Query Range Percent Splice Strand
CG3770-RA 1..660 608..1267 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-06-21 12:36:15 Download gff for FI21252.complete
Subject Subject Range Query Range Percent Splice Strand
CG3770-RA 12..1389 1..1378 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:32:14 Download gff for FI21252.complete
Subject Subject Range Query Range Percent Splice Strand
CG3770-RA 16..1393 1..1378 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:00:53 Download gff for FI21252.complete
Subject Subject Range Query Range Percent Splice Strand
CG3770-RA 16..1393 1..1378 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:32:08 Download gff for FI21252.complete
Subject Subject Range Query Range Percent Splice Strand
2R 24945154..24946163 1..1010 99 -> Plus
2R 24946219..24946332 1011..1124 100 -> Plus
2R 24946383..24946636 1125..1378 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:32:08 Download gff for FI21252.complete
Subject Subject Range Query Range Percent Splice Strand
2R 24945154..24946163 1..1010 99 -> Plus
2R 24946219..24946332 1011..1124 100 -> Plus
2R 24946383..24946636 1125..1378 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:32:08 Download gff for FI21252.complete
Subject Subject Range Query Range Percent Splice Strand
2R 24945154..24946163 1..1010 99 -> Plus
2R 24946219..24946332 1011..1124 100 -> Plus
2R 24946383..24946636 1125..1378 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:32:14 Download gff for FI21252.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 20833742..20833855 1011..1124 100 -> Plus
arm_2R 20832677..20833686 1..1010 99 -> Plus
arm_2R 20833906..20834159 1125..1378 100   Plus

FI21252.pep Sequence

Translation from 607 to 1266

> FI21252.pep
MCYVIITIASLVWFLCSLVADMLFAVALVTPRWLVGPAQGTDSTASSHHQ
SSVGIYTRCKVMQEGGFQCGRFDLDGLATDSSVYPNEWKAAMFFVMLGFS
LLSVTVILTLITCCRQSACGKSIHNMTACAQVVAGICMMLGLFLHPMGWR
ANRIQRLCGMDAEPFYPADCSIGVSFYCGIIGVLLTFTAAGISLKAESSN
MRTRVRRRVEAGSKLVCIP*

FI21252.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 12:22:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF13354-PA 216 GF13354-PA 1..216 1..219 946 82.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 12:22:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG23020-PA 219 GG23020-PA 1..219 1..219 1024 93.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 12:22:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH19836-PA 218 GH19836-PA 1..218 1..219 787 73.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:38:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG3770-PB 219 CG3770-PB 1..219 1..219 1154 100 Plus
CG3770-PA 219 CG3770-PA 1..219 1..219 1154 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 12:22:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI20424-PA 224 GI20424-PA 1..224 1..219 839 73.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 12:22:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL11201-PA 221 GL11201-PA 1..221 1..219 813 81 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 12:22:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA17675-PA 221 GA17675-PA 1..221 1..219 813 81 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 12:22:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM11916-PA 219 GM11916-PA 1..219 1..219 1100 95 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 12:22:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD11912-PA 153 GD11912-PA 1..135 1..135 664 93.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 12:22:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ20098-PA 229 GJ20098-PA 1..229 1..219 905 75.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 12:22:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK20913-PA 217 GK20913-PA 1..217 1..219 803 73.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 12:22:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE14457-PA 219 GE14457-PA 1..219 1..219 1019 92.2 Plus

FI21252.hyp Sequence

Translation from 607 to 1266

> FI21252.hyp
MCYVIITIASLVWFLCSLVADMLFAVALVTPRWLVGPAQGTDSTASSHHQ
SSVGIYTRCKVMQEGGFQCGRFDLDGLATDSSVYPNEWKAAMFFVMLGFS
LLSVTVILTLITCCRQSACGKSIHNMTACAQVVAGICMMLGLFLHPMGWR
ANRIQRLCGMDAEPFYPADCSIGVSFYCGIIGVLLTFTAAGISLKAESSN
MRTRVRRRVEAGSKLVCIP*

FI21252.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:55:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG3770-PB 219 CG3770-PB 1..219 1..219 1154 100 Plus
CG3770-PA 219 CG3770-PA 1..219 1..219 1154 100 Plus