Clone FI21255 Report

Search the DGRC for FI21255

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:212
Well:55
Vector:pOT2|pOTB7_DraIII
Associated Gene/TranscriptCG15820-RA
Protein status:FI21255.pep: gold
Sequenced Size:1198

Clone Sequence Records

FI21255.complete Sequence

1198 bp assembled on 2013-06-21

GenBank Submission: BT150129.1

> FI21255.complete
CTACAAATTTTGGTAATTCACATGGGTTGATGTGATATGATTATAAGATA
GTAAAGATAATACTCTGTCAAAATAACTGGAACAGAACATTGCATTGAAG
GCAAAGATCAGAAACGGTTGTTTGAATAAGAATGAAAAAAGCATTTTAGT
AGAAAATTAAATTTTCGGTGGAACAAACTACAAGGAAGCAATGCATAAAC
GCCTGCAGTATGAAGAGGTGATGATTCCAGCACCTTGGGGTCACATAGCA
GGCCGTTGGTATGGCAATCGAGCTGATAGACCCATTTTGGCAATTCACGG
ATGGCTGGACAATCTGGGAACCTTCGATCGGCTGATTCCCCTGCTTCCCG
ACTACATAGGCGTGCTGTGCATCGACCTACCCGGACATGGTAGATCTTCT
AGGCTTCCGCCGGGTGTGCCCTACAACGTCTACGACTATGTGTTCATCAT
ACCGAGGGTGATGAAGGAGTTCGGCTGGTCCAAGGTCTCCTTAATGGGTC
ATTCCCTTGGAGGAGTGATGAGCTTCATGTACGCAGCCATGGCACCAAGC
ACAGTCGATATGATTATATCATTGGATGTACTGCTGCCGCGGAGAATCGA
GGATCCCAGCAAGTTGACCAAGGACATAGAAGGTTATTTGCTGGAGGAGA
GGCGACAGGCGGATGGCACCGAACATGAGCCGCCATCGTTCACCTTAAGT
AAACTGCGTGAGACGCTCGCCCGGAACAGCAACAACTCGGTGCCGCAACA
CCTGGCCGATCACATGCTCCACCGCCAGGTGGCCAAATCAAACATGTACC
CGGAAAAGGTATTCTTCTCCAGAGATGGGCGTGTAAAGTTCTATCACATA
TTCGACATTGAAAACGGACTTGCTCTTGAAATGGCGAGGCGCATTGAGAA
GAAACCCTATCTGGTAATTAAGGGATCCCTTTCGCCATTTGTGGGACCTC
GATGCAACGAAACAATGTCCATTCTGTCCCATGATAACCCCAACTTTGAG
TTCTACGAAGTGGAGGGCGGCAAGCATCATGTCCACCTGCATGCCGCCGA
GGAGTGTGCCCGCTATATCGTTCCCTTCATCCGAAATCACAGACCTCCAA
GAAGCAGCAAACTTTAATGTGCTATTTAAGTTTTAGGAAACACATTTTTG
GGAGTAGTAAAATAAACTTGAAATTGAGGAAAAAAAAAAAAAAAAAAA

FI21255.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 14:31:05
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 2172456..2173438 1179..197 4675 98.4 Minus
chr3L 24539361 chr3L 2173594..2173789 196..1 905 97.4 Minus
chr3L 24539361 chr3L 2167856..2168214 588..230 730 80.2 Minus
chr3L 24539361 chr3L 2169828..2170138 528..218 580 79.1 Minus
chr3L 24539361 chr3L 2171959..2172131 396..224 340 79.8 Minus
chr3L 24539361 chr3L 2167337..2167442 1098..993 245 82.1 Minus
chr3L 24539361 chr3L 2169261..2169404 1098..955 225 77.1 Minus
chr3L 24539361 chr3L 2171303..2171442 1059..920 205 76.4 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 14:31:03
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 2172996..2173981 1182..197 4705 98.5 Minus
3L 28110227 3L 2174137..2174332 196..1 920 98 Minus
3L 28110227 3L 2168405..2168763 588..230 730 80.2 Minus
3L 28110227 3L 2170373..2170683 528..218 535 78.1 Minus
3L 28110227 3L 2172503..2172675 396..224 310 78.6 Minus
3L 28110227 3L 2169806..2169949 1098..955 255 78.5 Minus
3L 28110227 3L 2167889..2167991 1095..993 230 81.6 Minus
3L 28110227 3L 2171850..2172028 1059..881 205 74.3 Minus
Blast to na_te.dros performed on 2019-03-15 14:31:03 has no hits.

FI21255.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 14:32:06 Download gff for FI21255.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 2172456..2173438 197..1179 98 <- Minus
chr3L 2173594..2173789 1..196 97   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2013-06-21 12:29:10 Download gff for FI21255.complete
Subject Subject Range Query Range Percent Splice Strand
CG15820-RA 1..927 191..1117 98   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 00:32:10 Download gff for FI21255.complete
Subject Subject Range Query Range Percent Splice Strand
CG15820-RA 1..927 191..1117 98   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:00:51 Download gff for FI21255.complete
Subject Subject Range Query Range Percent Splice Strand
CG15820-RA 1..927 191..1117 98   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-06-21 12:29:10 Download gff for FI21255.complete
Subject Subject Range Query Range Percent Splice Strand
CG15820-RA 1..1179 1..1179 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:32:10 Download gff for FI21255.complete
Subject Subject Range Query Range Percent Splice Strand
CG15820-RA 1..1179 1..1179 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:00:51 Download gff for FI21255.complete
Subject Subject Range Query Range Percent Splice Strand
CG15820-RA 1..1179 1..1179 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:32:06 Download gff for FI21255.complete
Subject Subject Range Query Range Percent Splice Strand
3L 2172999..2173981 197..1179 98 <- Minus
3L 2174137..2174332 1..196 97   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:32:06 Download gff for FI21255.complete
Subject Subject Range Query Range Percent Splice Strand
3L 2172999..2173981 197..1179 98 <- Minus
3L 2174137..2174332 1..196 97   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:32:06 Download gff for FI21255.complete
Subject Subject Range Query Range Percent Splice Strand
3L 2172999..2173981 197..1179 98 <- Minus
3L 2174137..2174332 1..196 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:32:10 Download gff for FI21255.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 2172999..2173981 197..1179 98 <- Minus
arm_3L 2174137..2174332 1..196 97   Minus

FI21255.pep Sequence

Translation from 190 to 1116

> FI21255.pep
MHKRLQYEEVMIPAPWGHIAGRWYGNRADRPILAIHGWLDNLGTFDRLIP
LLPDYIGVLCIDLPGHGRSSRLPPGVPYNVYDYVFIIPRVMKEFGWSKVS
LMGHSLGGVMSFMYAAMAPSTVDMIISLDVLLPRRIEDPSKLTKDIEGYL
LEERRQADGTEHEPPSFTLSKLRETLARNSNNSVPQHLADHMLHRQVAKS
NMYPEKVFFSRDGRVKFYHIFDIENGLALEMARRIEKKPYLVIKGSLSPF
VGPRCNETMSILSHDNPNFEFYEVEGGKHHVHLHAAEECARYIVPFIRNH
RPPRSSKL*

FI21255.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 12:22:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF24931-PA 315 GF24931-PA 3..298 5..301 1212 74.1 Plus
Dana\GF24932-PA 342 GF24932-PA 9..306 7..303 1082 66.2 Plus
Dana\GF24933-PA 344 GF24933-PA 10..309 8..303 1075 65 Plus
Dana\GF24930-PA 362 GF24930-PA 21..317 9..303 796 50 Plus
Dana\GF10275-PA 330 GF10275-PA 33..329 6..302 609 43.6 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 12:22:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG14530-PA 314 GG14530-PA 9..314 3..308 1573 95.8 Plus
Dere\GG14531-PA 335 GG14531-PA 9..304 7..303 1114 68.7 Plus
Dere\GG14532-PA 344 GG14532-PA 9..307 7..303 1033 62.3 Plus
Dere\GG14529-PA 357 GG14529-PA 20..317 8..303 744 48.5 Plus
Dere\GG16172-PA 330 GG16172-PA 33..329 6..302 610 43.1 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 12:22:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH16488-PA 343 GH16488-PA 9..309 7..306 968 59.7 Plus
Dgri\GH23210-PA 318 GH23210-PA 9..310 7..307 847 53.5 Plus
Dgri\GH16489-PA 318 GH16489-PA 9..310 7..307 847 53.5 Plus
Dgri\GH16485-PA 353 GH16485-PA 22..319 9..304 797 50.2 Plus
Dgri\GH16159-PA 359 GH16159-PA 46..341 7..302 596 41.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:12:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG15820-PA 308 CG15820-PA 1..308 1..308 1653 100 Plus
CG5704-PB 335 CG5704-PB 9..304 7..303 1096 68.4 Plus
CG5704-PA 335 CG5704-PA 9..304 7..303 1096 68.4 Plus
CG15879-PA 342 CG15879-PA 6..305 7..303 1074 65.1 Plus
CG5707-PA 357 CG5707-PA 21..317 9..303 783 48 Plus
CG5707-PC 361 CG5707-PC 25..321 9..303 783 48 Plus
CG5707-PB 361 CG5707-PB 25..321 9..303 783 48 Plus
CG7632-PB 312 CG7632-PB 16..311 7..302 597 42.9 Plus
CG7632-PA 330 CG7632-PA 34..329 7..302 597 42.9 Plus
CG11309-PF 348 CG11309-PF 35..330 7..302 595 41.9 Plus
CG11309-PE 348 CG11309-PE 35..330 7..302 595 41.9 Plus
CG11309-PD 348 CG11309-PD 35..330 7..302 595 41.9 Plus
CG11309-PC 348 CG11309-PC 35..330 7..302 595 41.9 Plus
CG11309-PB 348 CG11309-PB 35..330 7..302 595 41.9 Plus
CG11309-PA 358 CG11309-PA 45..340 7..302 595 41.9 Plus
kraken-PB 331 CG3943-PB 39..329 7..298 389 32.7 Plus
kraken-PA 331 CG3943-PA 39..329 7..298 389 32.7 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 12:22:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI12160-PA 342 GI12160-PA 9..306 7..303 1004 62 Plus
Dmoj\GI12161-PA 343 GI12161-PA 8..307 6..304 921 55.8 Plus
Dmoj\GI12158-PA 395 GI12158-PA 60..356 9..303 796 50.3 Plus
Dmoj\GI12011-PA 336 GI12011-PA 39..335 6..302 594 42.6 Plus
Dmoj\GI13311-PA 352 GI13311-PA 39..334 7..302 583 41.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 12:22:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL24626-PA 348 GL24626-PA 8..309 6..303 1138 67.9 Plus
Dper\GL24627-PA 331 GL24627-PA 9..306 7..303 950 60.1 Plus
Dper\GL24680-PA 330 GL24680-PA 33..329 6..302 614 43.2 Plus
Dper\GL24589-PA 348 GL24589-PA 35..330 7..302 593 41.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 12:22:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA23367-PA 348 GA23367-PA 8..309 6..303 1142 67.9 Plus
Dpse\GA23368-PA 332 GA23368-PA 9..306 7..303 943 59.8 Plus
Dpse\GA19073-PA 365 GA19073-PA 28..325 9..304 797 49.8 Plus
Dpse\GA20494-PA 330 GA20494-PA 33..329 6..302 613 43.2 Plus
Dpse\GA10906-PA 348 GA10906-PA 35..330 7..302 593 41.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 12:22:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM14136-PA 308 GM14136-PA 1..308 1..308 1600 97.4 Plus
Dsec\GM14139-PA 345 GM14139-PA 9..308 7..303 1108 67 Plus
Dsec\GM14137-PA 323 GM14137-PA 9..318 2..308 958 57.1 Plus
Dsec\GM14138-PA 293 GM14138-PA 8..270 6..269 930 67 Plus
Dsec\GM26924-PA 355 GM22149-PA 42..337 7..302 592 41.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 12:22:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD13406-PA 308 GD13406-PA 1..308 1..308 1599 97.4 Plus
Dsim\GD13410-PA 345 GD13410-PA 9..308 7..303 1116 67.3 Plus
Dsim\GD13408-PA 335 GD13408-PA 8..304 6..303 1088 67.4 Plus
Dsim\GD13407-PA 319 GD13407-PA 11..314 8..308 936 56.6 Plus
Dsim\GD13405-PA 357 GD13405-PA 21..318 9..304 752 48.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 12:22:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ11632-PA 343 GJ11632-PA 9..309 7..306 1006 61.4 Plus
Dvir\GJ13440-PA 343 GJ13440-PA 9..306 7..303 963 59.9 Plus
Dvir\GJ13439-PA 340 GJ13439-PA 9..306 7..303 929 59.3 Plus
Dvir\GJ13437-PA 357 GJ13437-PA 22..318 9..303 786 50 Plus
Dvir\GJ13282-PA 336 GJ13282-PA 40..335 7..302 617 44.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 12:22:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK12602-PA 346 GK12602-PA 9..307 7..303 1070 64.7 Plus
Dwil\GK12598-PA 358 GK12598-PA 20..317 9..304 761 50.2 Plus
Dwil\GK20467-PA 335 GK20467-PA 38..334 6..302 602 43.1 Plus
Dwil\GK20424-PA 352 GK20424-PA 37..333 6..302 587 41.4 Plus
Dwil\GK24439-PA 338 GK24439-PA 41..337 6..299 393 34.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 12:22:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE20881-PA 314 GE20881-PA 9..314 3..308 1595 96.4 Plus
Dyak\GE20883-PA 335 GE20883-PA 8..304 6..303 1121 69.1 Plus
Dyak\GE20884-PA 341 GE20884-PA 6..304 7..303 1040 64.1 Plus
Dyak\GE20882-PA 319 GE20882-PA 11..309 8..303 936 57.5 Plus
Dyak\GE20878-PA 357 GE20878-PA 21..317 9..303 749 49.3 Plus

FI21255.hyp Sequence

Translation from 190 to 1116

> FI21255.hyp
MHKRLQYEEVMIPAPWGHIAGRWYGNRADRPILAIHGWLDNLGTFDRLIP
LLPDYIGVLCIDLPGHGRSSRLPPGVPYNVYDYVFIIPRVMKEFGWSKVS
LMGHSLGGVMSFMYAAMAPSTVDMIISLDVLLPRRIEDPSKLTKDIEGYL
LEERRQADGTEHEPPSFTLSKLRETLARNSNNSVPQHLADHMLHRQVAKS
NMYPEKVFFSRDGRVKFYHIFDIENGLALEMARRIEKKPYLVIKGSLSPF
VGPRCNETMSILSHDNPNFEFYEVEGGKHHVHLHAAEECARYIVPFIRNH
RPPRSSKL*

FI21255.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:55:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG15820-PA 308 CG15820-PA 1..308 1..308 1653 100 Plus
CG5704-PB 335 CG5704-PB 9..304 7..303 1096 68.4 Plus
CG5704-PA 335 CG5704-PA 9..304 7..303 1096 68.4 Plus
CG15879-PA 342 CG15879-PA 6..305 7..303 1074 65.1 Plus
CG5707-PA 357 CG5707-PA 21..317 9..303 783 48 Plus