Clone FI21280 Report

Search the DGRC for FI21280

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:212
Well:80
Vector:pOT2|pOTB7_DraIII
Associated Gene/TranscriptDnaJ-H-RA
Protein status:FI21280.pep: gold
Sequenced Size:2063

Clone Sequence Records

FI21280.complete Sequence

2063 bp assembled on 2013-09-16

GenBank Submission: BT150251.1

> FI21280.complete
ATTGCGTAGTGTCGGGCACCTGGTTGCCCAGATCTTTAGACCTAATGTGG
CCCAGGCGAATTTCCTCGTAATTTTCCATCATTTTTTCCGAACCCAAGCG
CGCGCACACGCGCACACACACAGACTCACGGAGAGAAAACTCTCGTAGTT
GGTGCTGTTGCTGGCTCTTCTTCTTCTTGCGCGAGTGTTTCCTCGGTCTC
TCCGCTTTGCGCTCTCGCCTCGTCCGTTTTCTCCGCTCTTTCGTTGGTAC
ACACAAAAATTTTTACGTCGTCAGCTTCGCACCCATTTGGCTTGATTGAA
AAAATTCTCCAGCGATCGTTTGGCCGCGATTTTTTCAACCAACCCGACTT
TATTTCACGTATATGCACGAAACTTAAATTTTAAAAAAATTTCGACACCA
TTTGGTTGCGATTTTTTCGTAATTTTCGAGCGTAGTTTCTGGAAAATTTT
CCGATGAAAAAAGCAAGATGGCACACGTAGCTGCGCCTGTGTGTGTATGT
GGGCTGGCAGACGTGATTCGGGTGGGACCCTGACACGTCGTGTGGAAAGT
GCTAACGCGTTTCTGCATGGAAAGTGCCGCCAGCATGACTCATCACGTTT
GTAGGGGGACTGGGGATGCAATAGGAAATGGACAACCTAAATTTATACGA
CGTTCTTAAAGTGGCTCCGGATGCAACTGATGAGGAAATAAAAAAGAACT
ACCGAAAATTGGCAAAAGAGTTCCATCCAGACAAGAATCCCGATGCGGGC
GACAAGTTTAAAGAAATATCCTTCGCCTACGAAGTGCTGTCCGATCCCGA
GAAGCGGCGCATCTACGACCGATATGGATTGAAGGGCCTGCAAGAGGGCG
CCGAGGGATTCTCTGATGCCTCCGAATTCTTCGCCCAGTGGTTCCCCTTC
GATCGAGTCTCGTCCGAAGGTCGGGGCAGGCGCAATGGCAAAGTCGTGGT
AAAAGTGGAGCTGACCCTGGAGGAGATCTACGTCGGCGGCATGAAGAAGA
AGGTGGAGTACAATCGCCAGAAGCTGTGCTCCAAGTGTAACGGCGATGGC
GGTCCCAAGGAAGCGCACGAGAGCTGCGAGACCTGCGGCGGAGCTGGACG
AGCGGCCGCATTTACCTTCATGGGTCTCAGCCCCTTCGATACGACCTGTC
CGACTTGCGATGGCAGGGGCTTCACCATAAGGGACGACAAGAAGTGCAGT
CCCTGCCAGGGCAGTGGTTTCGTAGAGCAGAAGATGAAGCGGGACCTGGT
TGTGGAGCGAGGAGCACCGCACATGCTAAAAGTTCCCTTCGCAAATGAGG
GCCACCAAATGCGAGGCGGCGAATTTGGGGATCTGATTGTAGTCATCTCC
CAGATGGAACATCCAATCTTTCAGCGCCGCCATGCCAATCTGTACATGCG
AGACCTGGAGATCAACATCACGGAGGCCTTGTGCGGCTACTCGCATTGTT
TCAAGCACTTGGATGGACGAAACGTCTGTCTGCGCACGTACCCTGGTGAA
GTGTTGCAGCACAACCAGATCAAGATGGTGCGAGGCAGCGGTATGCCTGT
TTTTAACAAGGCCACCGACAGTGGAGATCTCTACATGAAGTTTAAGGTTA
AGTTTCCGGACAACGACTTTGCCACGGCACCGCAGTTGGCCATGCTGGAG
GACTTACTCCCTCCCAGACAGCCGATAGTGATCCCAAAGAACGCCGAGGA
AGTGCAAATGACGGACTATAAGCCGCAGCCACGACAGCAGGAAGACGAGG
ACGGACAGTCGTCTCACTTTGAGGGCGTACAGTGCCAGACGGCTTAGTGC
ATGTGGTTGTGGCTCCTGCAGGCGCGGTATCTCTGCCTCGATTTGTGGCT
CGTCCTGGGCACTTTCAGCGTAGATGAAGTCTGCTTCCTGGTGCCGCTGT
TCGTCCTGATATGCATAGTATTATTTTTCATACAGGAATGTTTGCTGTGA
AAAGCGCGTGATCTAAATTCGTAGTGTTATTATTCGAGACTAAAGCTTAG
CTGATCTGTCACTAATACATTAGCCACGCTAAATTAAAAAAAAAAAAAAA
AAAAAAAAAAAAA

FI21280.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-17 00:20:25
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 13162009..13162901 2035..1143 4435 99.8 Minus
chr2L 23010047 chr2L 13164172..13164768 597..1 2985 100 Minus
chr2L 23010047 chr2L 13163013..13163461 1143..695 2245 100 Minus
chr2L 23010047 chr2L 13163522..13163621 696..597 485 99 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-17 00:20:23
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 13163310..13164204 2037..1143 4445 99.8 Minus
2L 23513712 2L 13165476..13166072 597..1 2970 99.8 Minus
2L 23513712 2L 13164316..13164764 1143..695 2245 100 Minus
2L 23513712 2L 13164825..13164924 696..597 500 100 Minus
Blast to na_te.dros performed on 2019-03-17 00:20:24 has no hits.

FI21280.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-17 00:21:08 Download gff for FI21280.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 13162009..13162900 1144..2035 99 <- Minus
chr2L 13163013..13163459 697..1143 100 <- Minus
chr2L 13163522..13163620 598..696 98 <- Minus
chr2L 13164172..13164768 1..597 100   Minus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-09-16 14:48:11 Download gff for FI21280.complete
Subject Subject Range Query Range Percent Splice Strand
DnaJ-H-RC 1..1323 628..1950 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:25:13 Download gff for FI21280.complete
Subject Subject Range Query Range Percent Splice Strand
DnaJ-H-RC 1..1323 628..1950 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 14:48:11 Download gff for FI21280.complete
Subject Subject Range Query Range Percent Splice Strand
DnaJ-H-RB 1..2035 1..2035 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:25:13 Download gff for FI21280.complete
Subject Subject Range Query Range Percent Splice Strand
DnaJ-H-RB 1..2035 1..2035 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 00:21:08 Download gff for FI21280.complete
Subject Subject Range Query Range Percent Splice Strand
2L 13163312..13164203 1144..2035 99 <- Minus
2L 13164316..13164762 697..1143 100 <- Minus
2L 13164825..13164923 598..696 100 <- Minus
2L 13165476..13166072 1..597 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 00:21:08 Download gff for FI21280.complete
Subject Subject Range Query Range Percent Splice Strand
2L 13163312..13164203 1144..2035 99 <- Minus
2L 13164316..13164762 697..1143 100 <- Minus
2L 13164825..13164923 598..696 100 <- Minus
2L 13165476..13166072 1..597 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 00:21:08 Download gff for FI21280.complete
Subject Subject Range Query Range Percent Splice Strand
2L 13163312..13164203 1144..2035 99 <- Minus
2L 13164316..13164762 697..1143 100 <- Minus
2L 13164825..13164923 598..696 100 <- Minus
2L 13165476..13166072 1..597 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 14:48:11 Download gff for FI21280.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 13163312..13164203 1144..2035 99 <- Minus
arm_2L 13164316..13164762 697..1143 100 <- Minus
arm_2L 13164825..13164923 598..696 100 <- Minus
arm_2L 13165476..13166072 1..597 99   Minus

FI21280.hyp Sequence

Translation from 627 to 1796

> FI21280.hyp
MDNLNLYDVLKVAPDATDEEIKKNYRKLAKEFHPDKNPDAGDKFKEISFA
YEVLSDPEKRRIYDRYGLKGLQEGAEGFSDASEFFAQWFPFDRVSSEGRG
RRNGKVVVKVELTLEEIYVGGMKKKVEYNRQKLCSKCNGDGGPKEAHESC
ETCGGAGRAAAFTFMGLSPFDTTCPTCDGRGFTIRDDKKCSPCQGSGFVE
QKMKRDLVVERGAPHMLKVPFANEGHQMRGGEFGDLIVVISQMEHPIFQR
RHANLYMRDLEINITEALCGYSHCFKHLDGRNVCLRTYPGEVLQHNQIKM
VRGSGMPVFNKATDSGDLYMKFKVKFPDNDFATAPQLAMLEDLLPPRQPI
VIPKNAEEVQMTDYKPQPRQQEDEDGQSSHFEGVQCQTA*

FI21280.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:01:32
Subject Length Description Subject Range Query Range Score Percent Strand
DnaJ-H-PA 389 CG9828-PA 1..389 1..389 2094 100 Plus
DnaJ-H-PB 389 CG9828-PB 1..389 1..389 2094 100 Plus
DnaJ-H-PC 440 CG9828-PC 1..389 1..389 2094 100 Plus
Droj2-PE 403 CG8863-PE 8..380 7..374 610 35 Plus
Droj2-PD 403 CG8863-PD 8..380 7..374 610 35 Plus

FI21280.pep Sequence

Translation from 627 to 1796

> FI21280.pep
MDNLNLYDVLKVAPDATDEEIKKNYRKLAKEFHPDKNPDAGDKFKEISFA
YEVLSDPEKRRIYDRYGLKGLQEGAEGFSDASEFFAQWFPFDRVSSEGRG
RRNGKVVVKVELTLEEIYVGGMKKKVEYNRQKLCSKCNGDGGPKEAHESC
ETCGGAGRAAAFTFMGLSPFDTTCPTCDGRGFTIRDDKKCSPCQGSGFVE
QKMKRDLVVERGAPHMLKVPFANEGHQMRGGEFGDLIVVISQMEHPIFQR
RHANLYMRDLEINITEALCGYSHCFKHLDGRNVCLRTYPGEVLQHNQIKM
VRGSGMPVFNKATDSGDLYMKFKVKFPDNDFATAPQLAMLEDLLPPRQPI
VIPKNAEEVQMTDYKPQPRQQEDEDGQSSHFEGVQCQTA*

FI21280.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:55:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF15647-PA 391 GF15647-PA 1..391 1..389 1803 84.1 Plus
Dana\GF17599-PA 403 GF17599-PA 8..378 7..372 552 33.8 Plus
Dana\GF20662-PA 355 GF20662-PA 25..339 5..339 347 33 Plus
Dana\GF13077-PA 505 GF13077-PA 73..426 5..341 235 29.1 Plus
Dana\GF10450-PA 354 GF10450-PA 4..78 5..77 198 54.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:55:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG10228-PA 389 GG10228-PA 1..389 1..389 1986 93.8 Plus
Dere\GG19654-PA 403 GG19654-PA 8..378 7..372 576 35.5 Plus
Dere\GG24722-PA 354 GG24722-PA 25..338 5..339 363 33.9 Plus
Dere\DnaJ-1-PA 351 GG14117-PA 4..350 5..345 274 28 Plus
Dere\GG22881-PA 508 GG22881-PA 65..418 5..341 244 29.7 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:55:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH10346-PA 397 GH10346-PA 1..397 1..389 1588 72.5 Plus
Dgri\GH19043-PA 405 GH19043-PA 8..405 7..389 558 33.6 Plus
Dgri\GH11226-PA 355 GH11226-PA 25..339 5..339 334 31.5 Plus
Dgri\GH21307-PA 504 GH21307-PA 76..415 5..327 226 29.2 Plus
Dgri\GH16902-PA 127 GH16902-PA 4..77 5..76 193 47.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:05:44
Subject Length Description Subject Range Query Range Score Percent Strand
DnaJ-H-PC 440 CG9828-PC 1..389 1..389 2094 100 Plus
DnaJ-H-PA 389 CG9828-PA 1..389 1..389 2094 100 Plus
DnaJ-H-PB 389 CG9828-PB 1..389 1..389 2094 100 Plus
Droj2-PE 403 CG8863-PE 8..380 7..374 610 35 Plus
Droj2-PD 403 CG8863-PD 8..380 7..374 610 35 Plus
Droj2-PC 403 CG8863-PC 8..380 7..374 610 35 Plus
Droj2-PB 403 CG8863-PB 8..380 7..374 610 35 Plus
Droj2-PA 403 CG8863-PA 8..380 7..374 610 35 Plus
shv-PA 354 CG4164-PA 25..338 5..339 381 33.3 Plus
DnaJ-1-PA 334 CG10578-PA 4..333 5..345 295 29.9 Plus
DnaJ-1-PB 334 CG10578-PB 4..333 5..345 295 29.9 Plus
l(2)tid-PE 445 CG5504-PE 67..418 7..341 277 30.7 Plus
l(2)tid-PA 447 CG5504-PA 67..418 7..341 277 30.7 Plus
l(2)tid-PC 507 CG5504-PC 67..418 7..341 277 30.7 Plus
l(2)tid-PD 514 CG5504-PD 67..418 7..341 277 30.7 Plus
l(2)tid-PB 520 CG5504-PB 67..418 7..341 277 30.7 Plus
CG2887-PA 342 CG2887-PA 6..339 7..344 259 28.2 Plus
mrj-PA 259 CG8448-PA 2..88 4..86 215 50.6 Plus
mrj-PC 259 CG8448-PC 2..88 4..86 215 50.6 Plus
mrj-PB 259 CG8448-PB 2..88 4..86 215 50.6 Plus
mrj-PD 259 CG8448-PD 2..88 4..86 215 50.6 Plus
CG5001-PC 346 CG5001-PC 6..75 7..74 205 58.6 Plus
CG5001-PD 350 CG5001-PD 6..75 7..74 205 58.6 Plus
CG5001-PA 350 CG5001-PA 6..75 7..74 205 58.6 Plus
CG5001-PB 350 CG5001-PB 6..75 7..74 205 58.6 Plus
CG7387-PA 449 CG7387-PA 102..438 7..354 205 26.8 Plus
Csp-PA 223 CG6395-PA 17..86 5..71 200 55.7 Plus
Csp-PC 228 CG6395-PC 17..86 5..71 200 55.7 Plus
Csp-PE 244 CG6395-PE 17..86 5..71 200 55.7 Plus
Csp-PD 244 CG6395-PD 17..86 5..71 200 55.7 Plus
Csp-PF 249 CG6395-PF 17..86 5..71 200 55.7 Plus
Csp-PB 249 CG6395-PB 17..86 5..71 200 55.7 Plus
mrj-PG 346 CG8448-PG 2..66 4..64 188 58.5 Plus
mrj-PH 346 CG8448-PH 2..66 4..64 188 58.5 Plus
mrj-PE 346 CG8448-PE 2..66 4..64 188 58.5 Plus
CG7130-PA 128 CG7130-PA 6..73 7..72 174 47.1 Plus
CG3061-PA 370 CG3061-PA 108..177 7..74 164 51.4 Plus
CG8531-PA 545 CG8531-PA 15..93 5..76 156 48.1 Plus
CG2790-PA 540 CG2790-PA 5..91 7..85 155 43.7 Plus
CG40178-PC 780 CG40178-PC 32..98 7..71 155 44.8 Plus
CG40178-PA 780 CG40178-PA 32..98 7..71 155 44.8 Plus
CG40178-PB 780 CG40178-PB 32..98 7..71 155 44.8 Plus
CG17187-PA 299 CG17187-PA 8..73 3..65 152 47 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:55:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\Tes40-PA 380 GI21193-PA 1..380 1..389 1400 65.3 Plus
Dmoj\GI24337-PA 404 GI24337-PA 8..379 7..372 567 34.8 Plus
Dmoj\GI21690-PA 355 GI21690-PA 25..339 5..339 363 33 Plus
Dmoj\GI19741-PA 512 GI19741-PA 80..435 1..341 225 28 Plus
Dmoj\GI11521-PA 505 GI11521-PA 4..91 5..91 212 49.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:55:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL24772-PA 392 GL24772-PA 1..392 1..389 1685 78.6 Plus
Dper\GL24472-PA 404 GL24472-PA 8..379 7..372 559 33.8 Plus
Dper\GL18879-PA 355 GL18879-PA 25..339 5..339 340 33.2 Plus
Dper\GL16883-PA 525 GL16883-PA 84..437 5..341 227 29 Plus
Dper\GL20793-PA 158 GL20793-PA 17..111 5..95 200 46.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:55:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA22062-PA 392 GA22062-PA 1..392 1..389 1685 78.6 Plus
Dpse\GA21376-PA 404 GA21376-PA 8..379 7..372 559 33.8 Plus
Dpse\GA17999-PA 355 GA17999-PA 25..339 5..339 340 33.2 Plus
Dpse\GA24322-PA 525 GA24322-PA 84..437 5..341 227 29 Plus
Dpse\GA20316-PA 427 GA20316-PA 80..426 7..358 212 27.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:55:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM25845-PA 389 GM25845-PA 1..389 1..389 2039 96.4 Plus
Dsec\GM24106-PA 382 GM24106-PA 8..357 7..372 511 33.3 Plus
Dsec\GM16745-PA 354 GM16745-PA 25..338 5..339 367 33.9 Plus
Dsec\DnaJ-1-PA 337 GM13903-PA 4..336 5..345 304 29.3 Plus
Dsec\GM16041-PA 489 GM16041-PA 65..403 5..341 216 28.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:55:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD22085-PA 389 GD22085-PA 1..389 1..389 2041 96.4 Plus
Dsim\GD18906-PA 403 GD18906-PA 8..378 7..372 554 33.6 Plus
Dsim\DnaJ-1-PA 352 GD13179-PA 4..351 5..345 283 27.9 Plus
Dsim\GD11789-PA 505 GD11789-PA 65..418 5..341 243 29.7 Plus
Dsim\GD23027-PA 255 GD23027-PA 30..239 102..339 216 30.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:55:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ10994-PA 393 GJ10994-PA 1..393 1..389 1575 73.1 Plus
Dvir\GJ10422-PA 403 GJ10422-PA 8..378 7..372 558 34.1 Plus
Dvir\GJ17778-PA 355 GJ17778-PA 25..339 5..339 344 32.1 Plus
Dvir\l(2)tid-PA 516 GJ18004-PA 76..432 1..341 210 29.3 Plus
Dvir\GJ11775-PA 124 GJ11775-PA 4..77 5..76 198 51.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:55:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK14806-PA 396 GK14806-PA 1..396 1..389 1512 69.1 Plus
Dwil\GK13941-PA 403 GK13941-PA 8..378 7..372 552 33.3 Plus
Dwil\GK24395-PA 360 GK24395-PA 30..344 5..339 346 32.4 Plus
Dwil\GK19767-PA 330 GK19767-PA 4..313 5..327 280 29.5 Plus
Dwil\GK19161-PA 125 GK19161-PA 4..80 5..79 196 49.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:55:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE11908-PA 389 GE11908-PA 1..389 1..389 2001 94.9 Plus
Dyak\GE26270-PA 403 GE26270-PA 8..378 7..372 557 33.9 Plus
Dyak\GE16847-PA 354 GE16847-PA 25..338 5..339 365 33.9 Plus
Dyak\DnaJ-1-PA 351 GE20542-PA 4..350 5..345 277 27.9 Plus
Dyak\GE14318-PA 507 GE14318-PA 65..418 5..341 243 29.7 Plus