Clone FI21284 Report

Search the DGRC for FI21284

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:212
Well:84
Vector:pOT2|pOTB7_DraIII
Associated Gene/TranscriptMsi-RA
Protein status:FI21284.pep: gold
Sequenced Size:1836

Clone Sequence Records

FI21284.complete Sequence

1836 bp assembled on 2013-06-25

GenBank Submission: BT150137.1

> FI21284.complete
GTTTTGGAAAGCATATTAGGCATTTTCGGGCTCAAAATTAAAAAAAAAAA
AAATTTGTTTGGATCTTAAAATTATTTGATTTTTTTAATCGCGGCAATGG
GGGATGTGGAGTTTCAGAATGTCCAAGAGATAAGGGGCACTCCACAGAAT
GCAATGAGAATGATCCGCTTAGAACTCGACGAGGAGGAGAATCGCCGGCA
AATGTCGTCCAGTAAATATGGTGGCGTCTGCTTCCACGTGGCCATAGCCG
TCATGCTTTGTGTAATGGTGTTGGTGCTAATTTGTTCGGCTCCCCTTGGA
GAAAACATGTCCAATCTTACGTCCGAGGAGCGGCACGCTCGCCTGAGGCA
GATTTACATTGAGAAAGAGCGCCGGCAAAGACTTGGCAGCAGGATGGGCT
TGAGTCCGCTGGAGGAGGAGGCCAATGATCGGCTCATGGCCATTAGGCAG
GTGGATGAGGAGTTTTATAATCTCTGGAGGAACTACCACTCCCAGCCACC
GCCGTTTCTCAAACATCTGAACATCATCGATACGAATCTTTATGCGGCAC
TTAAGAGCATGCCCAAGGGCGGACTCCTTCACGTCCACGATTCGGGAATG
TTGAGAATGGAAATTCTCATCGATTTGATCTACCGCGATAACCTGTGGGT
CTGCGTTAACTTGGAACAGGACTTCGAGGACTTCCGATTCTCCAGATACT
TTCCTCACATCCCGCCCGCTGAGGACTACCAGTGCAATTGGATGCTGATG
AGCAACTTCTTCCAGTTGGAGTCTCGGTTAGAATTCGAGAACAGGTTGAG
GAAAACTCTCACTGTCCGGCCGGAGGGGTATAAGAGTTCCTCCGAGTTGG
CGCGACACTTAAGACGCCACCAACGCATCATCCATGGACTGATCACATTC
CGCCCGATCTGGAGTGAATTTATCTTCACCATGCTGAGCGATTTCTATGC
CGACGGGGTGCATTATGTGGAGTTGCGTTCCTCGCTGCCAAATATGTACG
ATCTGGATGGAAATAATTTTACGATTTTGGAAACGGCGGAGGCCTTAGTT
TCAGTATCGAATATTTTTAAAAATAGCTTCAAAGATTTCATCGGAATTAA
GCTGATCTATGCTCCTTCTAGGAACTTAAATGACAGTCGAATGGATGAGT
ATTTGGAAAATGCACGTCTGCTTAAGTTGCATTTTCCGAATTTCTTTGCT
GGATTTGATCTTAACACCTTTGGGGACGAGTGCAATTTACCACTTTTAGA
AAATGTTACTCAACTATTAAGGATTGGCAAGAATATTGACTTCTATTTCC
ATGCGGGAGAGTCCCGATGTCCGGATAGTTCCCGCCCAGATGCGAATCTT
TTAGAGGCATTATTGTTGCAAAGTAAACGGATCGGTAATGCCGTGAATCT
ACCCTTTCATCCAGAGATTATGAAGGTCATGAAAAGGCTTAGTATAGCCG
TGGAGATCTGTCCGCTGTCCAACCATTATCTGCAATACTTTAACGATTTT
CGTCAACATCCGGCGGCGTATTTGATTGCCGCCGGATTTCCAATTGTAAT
TGGTTCGGACTATCCGTGTTTCTGGAACTCCGCCCCTCTGACCGACGACT
TTTATGTGGCCTTCGTGGGCGTGATTAGTGGGTGGGGCGATTTGCGCCTC
CTAAAGCAGTTTGCCCTCAATTCGTTTCTGTTTAGCTCCCTCAGCGAAAC
GGAGAAGAATATGGCCGTATCCAAGTGGCAGTGTAGCTGGAACCGATGGG
TCAGAAATTTAGTCAATAGTAGTGGATACTAACAAGTAATTGTCAAATAA
AAAACAAAAATTGTAAAAAAAAAAAAAAAAAAAAAA

FI21284.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 14:32:02
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 17745575..17746567 993..1 4950 99.9 Minus
chr3L 24539361 chr3L 17744567..17745206 1814..1175 3185 99.8 Minus
chr3L 24539361 chr3L 17745264..17745446 1176..994 915 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 14:32:01
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 17755944..17756936 993..1 4935 99.8 Minus
3L 28110227 3L 17754931..17755575 1819..1175 3210 99.8 Minus
3L 28110227 3L 17755633..17755815 1176..994 915 100 Minus
Blast to na_te.dros performed on 2019-03-15 14:32:01 has no hits.

FI21284.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 14:32:38 Download gff for FI21284.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 17744583..17745204 1177..1798 99 <- Minus
chr3L 17745264..17745446 994..1176 100 <- Minus
chr3L 17745575..17746567 1..993 97   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2013-06-26 12:40:16 Download gff for FI21284.complete
Subject Subject Range Query Range Percent Splice Strand
Msi-RA 1..1686 97..1782 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 00:33:38 Download gff for FI21284.complete
Subject Subject Range Query Range Percent Splice Strand
Msi-RA 1..1686 97..1782 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:01:54 Download gff for FI21284.complete
Subject Subject Range Query Range Percent Splice Strand
Msi-RA 1..1686 97..1782 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-06-26 12:40:16 Download gff for FI21284.complete
Subject Subject Range Query Range Percent Splice Strand
Msi-RA 1..1798 1..1798 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:33:38 Download gff for FI21284.complete
Subject Subject Range Query Range Percent Splice Strand
Msi-RA 1..1798 1..1798 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:01:54 Download gff for FI21284.complete
Subject Subject Range Query Range Percent Splice Strand
Msi-RA 1..1798 1..1798 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:32:38 Download gff for FI21284.complete
Subject Subject Range Query Range Percent Splice Strand
3L 17754952..17755573 1177..1798 99 <- Minus
3L 17755633..17755815 994..1176 100 <- Minus
3L 17755944..17756936 1..993 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:32:38 Download gff for FI21284.complete
Subject Subject Range Query Range Percent Splice Strand
3L 17754952..17755573 1177..1798 99 <- Minus
3L 17755633..17755815 994..1176 100 <- Minus
3L 17755944..17756936 1..993 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:32:38 Download gff for FI21284.complete
Subject Subject Range Query Range Percent Splice Strand
3L 17754952..17755573 1177..1798 99 <- Minus
3L 17755633..17755815 994..1176 100 <- Minus
3L 17755944..17756936 1..993 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:33:38 Download gff for FI21284.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 17748052..17748673 1177..1798 99 <- Minus
arm_3L 17748733..17748915 994..1176 100 <- Minus
arm_3L 17749044..17750036 1..993 99   Minus

FI21284.hyp Sequence

Translation from 96 to 1781

> FI21284.hyp
MGDVEFQNVQEIRGTPQNAMRMIRLELDEEENRRQMSSSKYGGVCFHVAI
AVMLCVMVLVLICSAPLGENMSNLTSEERHARLRQIYIEKERRQRLGSRM
GLSPLEEEANDRLMAIRQVDEEFYNLWRNYHSQPPPFLKHLNIIDTNLYA
ALKSMPKGGLLHVHDSGMLRMEILIDLIYRDNLWVCVNLEQDFEDFRFSR
YFPHIPPAEDYQCNWMLMSNFFQLESRLEFENRLRKTLTVRPEGYKSSSE
LARHLRRHQRIIHGLITFRPIWSEFIFTMLSDFYADGVHYVELRSSLPNM
YDLDGNNFTILETAEALVSVSNIFKNSFKDFIGIKLIYAPSRNLNDSRMD
EYLENARLLKLHFPNFFAGFDLNTFGDECNLPLLENVTQLLRIGKNIDFY
FHAGESRCPDSSRPDANLLEALLLQSKRIGNAVNLPFHPEIMKVMKRLSI
AVEICPLSNHYLQYFNDFRQHPAAYLIAAGFPIVIGSDYPCFWNSAPLTD
DFYVAFVGVISGWGDLRLLKQFALNSFLFSSLSETEKNMAVSKWQCSWNR
WVRNLVNSSGY*

FI21284.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:56:00
Subject Length Description Subject Range Query Range Score Percent Strand
Msi-PA 561 CG32178-PA 1..561 1..561 2966 100 Plus
Msi-PC 542 CG32178-PC 1..542 20..561 2867 100 Plus
Msi-PB 542 CG32178-PB 1..542 20..561 2867 100 Plus
Adgf-A-PB 553 CG5992-PB 64..542 78..559 801 35.3 Plus
Adgf-A-PA 553 CG5992-PA 64..542 78..559 801 35.3 Plus

FI21284.pep Sequence

Translation from 96 to 1781

> FI21284.pep
MGDVEFQNVQEIRGTPQNAMRMIRLELDEEENRRQMSSSKYGGVCFHVAI
AVMLCVMVLVLICSAPLGENMSNLTSEERHARLRQIYIEKERRQRLGSRM
GLSPLEEEANDRLMAIRQVDEEFYNLWRNYHSQPPPFLKHLNIIDTNLYA
ALKSMPKGGLLHVHDSGMLRMEILIDLIYRDNLWVCVNLEQDFEDFRFSR
YFPHIPPAEDYQCNWMLMSNFFQLESRLEFENRLRKTLTVRPEGYKSSSE
LARHLRRHQRIIHGLITFRPIWSEFIFTMLSDFYADGVHYVELRSSLPNM
YDLDGNNFTILETAEALVSVSNIFKNSFKDFIGIKLIYAPSRNLNDSRMD
EYLENARLLKLHFPNFFAGFDLNTFGDECNLPLLENVTQLLRIGKNIDFY
FHAGESRCPDSSRPDANLLEALLLQSKRIGNAVNLPFHPEIMKVMKRLSI
AVEICPLSNHYLQYFNDFRQHPAAYLIAAGFPIVIGSDYPCFWNSAPLTD
DFYVAFVGVISGWGDLRLLKQFALNSFLFSSLSETEKNMAVSKWQCSWNR
WVRNLVNSSGY*

FI21284.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 12:22:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF23891-PA 587 GF23891-PA 32..583 14..561 2076 66.9 Plus
Dana\GF23892-PA 557 GF23892-PA 63..539 76..555 848 37.2 Plus
Dana\GF23893-PA 516 GF23893-PA 37..515 80..560 816 37.3 Plus
Dana\GF13523-PA 550 GF13523-PA 30..530 58..559 718 33.7 Plus
Dana\GF18149-PA 499 GF18149-PA 27..496 83..557 594 31.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 12:22:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG15785-PA 561 GG15785-PA 1..561 1..561 2666 88.8 Plus
Dere\GG15787-PA 555 GG15787-PA 62..543 76..560 830 36.2 Plus
Dere\GG15788-PA 520 GG15788-PA 43..515 83..556 807 38.2 Plus
Dere\GG22410-PA 539 GG22410-PA 55..530 83..559 747 34.6 Plus
Dere\GG17028-PA 500 GG17028-PA 28..497 83..557 586 31.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 12:22:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH15339-PA 572 GH15339-PA 51..569 38..556 1692 57.9 Plus
Dgri\GH17999-PA 345 GH17999-PA 1..342 216..556 1187 62.1 Plus
Dgri\GH15341-PA 508 GH15341-PA 26..508 76..559 855 37.9 Plus
Dgri\GH15340-PA 552 GH15340-PA 59..534 78..552 823 37.3 Plus
Dgri\GH22920-PA 525 GH22920-PA 1..515 48..559 763 34.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:08:04
Subject Length Description Subject Range Query Range Score Percent Strand
Adgf-A2-PA 561 CG32178-PA 1..561 1..561 2966 100 Plus
Adgf-A2-PC 542 CG32178-PC 1..542 20..561 2867 100 Plus
Adgf-A2-PB 542 CG32178-PB 1..542 20..561 2867 100 Plus
Adgf-A-PB 553 CG5992-PB 64..542 78..559 801 35.3 Plus
Adgf-A-PA 553 CG5992-PA 64..542 78..559 801 35.3 Plus
Adgf-B-PA 520 CG5998-PA 43..515 83..556 780 37.5 Plus
Adgf-E-PA 539 CG10143-PA 39..527 67..556 767 35.8 Plus
Adgf-D-PA 502 CG9621-PA 30..499 83..557 574 31.3 Plus
Adgf-C-PA 506 CG9345-PA 4..504 56..559 473 28.6 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 12:22:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI12943-PA 573 GI12943-PA 41..570 28..556 1562 52.6 Plus
Dmoj\GI12946-PA 522 GI12946-PA 25..520 65..561 867 37.9 Plus
Dmoj\GI12945-PA 548 GI12945-PA 55..532 76..552 835 37.1 Plus
Dmoj\GI24423-PA 501 GI24423-PA 18..497 75..557 572 29.3 Plus
Dmoj\GI23159-PA 509 GI23159-PA 28..497 80..549 486 29.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 12:22:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL25219-PA 530 GL25219-PA 7..521 6..559 1545 52.2 Plus
Dper\GL18074-PA 425 GL18074-PA 1..414 142..559 848 40.8 Plus
Dper\GL10635-PA 531 GL10635-PA 34..521 70..559 780 34.5 Plus
Dper\GL24450-PA 499 GL24450-PA 27..496 83..557 588 31.5 Plus
Dper\GL25221-PA 539 GL25221-PA 304..538 322..558 515 44.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 12:22:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA16735-PA 572 GA16735-PA 7..563 6..559 1750 57.2 Plus
Dpse\GA19282-PA 551 GA19282-PA 60..540 76..559 869 37.8 Plus
Dpse\GA19286-PA 527 GA19286-PA 44..527 75..559 812 37.7 Plus
Dpse\GA10106-PA 531 GA10106-PA 34..521 70..559 776 34.3 Plus
Dpse\GA21919-PA 499 GA21919-PA 27..496 83..557 587 31.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 12:22:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM24310-PA 561 GM24310-PA 1..561 1..561 2887 95.4 Plus
Dsec\GM24311-PA 553 GM24311-PA 62..538 76..555 814 35.4 Plus
Dsec\GM20196-PA 539 GM20196-PA 55..527 83..556 774 36.6 Plus
Dsec\GM24312-PA 520 GM24312-PA 43..515 83..556 772 37.5 Plus
Dsec\GM25912-PA 502 GM25912-PA 30..499 83..557 590 31.4 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 12:22:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD12380-PA 517 GD12380-PA 1..517 22..561 2649 92.2 Plus
Dsim\GD12381-PA 553 GD12381-PA 62..538 76..555 820 35.6 Plus
Dsim\GD12382-PA 520 GD12382-PA 43..518 83..559 798 37.5 Plus
Dsim\GD25667-PA 539 GD25667-PA 55..528 83..557 773 36.3 Plus
Dsim\GD20479-PA 502 GD20479-PA 30..499 83..557 591 31.4 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 12:22:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13086-PA 566 GJ13086-PA 35..566 28..559 1628 54.5 Plus
Dvir\GJ13088-PA 519 GJ13088-PA 37..519 76..559 883 39.1 Plus
Dvir\GJ13087-PA 549 GJ13087-PA 52..543 73..560 799 36.1 Plus
Dvir\GJ21491-PA 530 GJ21491-PA 39..515 82..559 717 33.8 Plus
Dvir\GJ14281-PA 501 GJ14281-PA 26..497 83..557 550 29.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 12:22:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK12326-PA 492 GK12326-PA 9..491 75..557 1538 57.6 Plus
Dwil\GK12327-PA 565 GK12327-PA 73..554 76..558 847 36.1 Plus
Dwil\GK12328-PA 512 GK12328-PA 27..508 75..557 803 37.2 Plus
Dwil\GK19522-PA 537 GK19522-PA 45..527 75..558 793 35.6 Plus
Dwil\GK13065-PA 500 GK13065-PA 28..497 83..557 577 30.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 12:22:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE22123-PA 561 GE22123-PA 1..561 1..561 2717 87.7 Plus
Dyak\GE22124-PA 553 GE22124-PA 62..538 76..555 825 35.1 Plus
Dyak\GE22125-PA 519 GE22125-PA 42..514 83..556 811 38.4 Plus
Dyak\GE12299-PA 534 GE12299-PA 39..530 67..559 753 33.7 Plus
Dyak\GE24420-PA 500 GE24420-PA 28..497 83..557 588 31.2 Plus