BDGP Sequence Production Resources |
Search the DGRC for FI21284
Library: | FI |
Tissue Source: | various Drosophila melanogaster |
Created by: | |
Date Registered: | 2005-11-08 |
Comments: | Drosophila melanogaster corrected cDNA clones |
Original Plate Number: | 212 |
Well: | 84 |
Vector: | pOT2|pOTB7_DraIII |
Associated Gene/Transcript | Msi-RA |
Protein status: | FI21284.pep: gold |
Sequenced Size: | 1836 |
1836 bp assembled on 2013-06-25
GenBank Submission: BT150137.1
> FI21284.complete GTTTTGGAAAGCATATTAGGCATTTTCGGGCTCAAAATTAAAAAAAAAAA AAATTTGTTTGGATCTTAAAATTATTTGATTTTTTTAATCGCGGCAATGG GGGATGTGGAGTTTCAGAATGTCCAAGAGATAAGGGGCACTCCACAGAAT GCAATGAGAATGATCCGCTTAGAACTCGACGAGGAGGAGAATCGCCGGCA AATGTCGTCCAGTAAATATGGTGGCGTCTGCTTCCACGTGGCCATAGCCG TCATGCTTTGTGTAATGGTGTTGGTGCTAATTTGTTCGGCTCCCCTTGGA GAAAACATGTCCAATCTTACGTCCGAGGAGCGGCACGCTCGCCTGAGGCA GATTTACATTGAGAAAGAGCGCCGGCAAAGACTTGGCAGCAGGATGGGCT TGAGTCCGCTGGAGGAGGAGGCCAATGATCGGCTCATGGCCATTAGGCAG GTGGATGAGGAGTTTTATAATCTCTGGAGGAACTACCACTCCCAGCCACC GCCGTTTCTCAAACATCTGAACATCATCGATACGAATCTTTATGCGGCAC TTAAGAGCATGCCCAAGGGCGGACTCCTTCACGTCCACGATTCGGGAATG TTGAGAATGGAAATTCTCATCGATTTGATCTACCGCGATAACCTGTGGGT CTGCGTTAACTTGGAACAGGACTTCGAGGACTTCCGATTCTCCAGATACT TTCCTCACATCCCGCCCGCTGAGGACTACCAGTGCAATTGGATGCTGATG AGCAACTTCTTCCAGTTGGAGTCTCGGTTAGAATTCGAGAACAGGTTGAG GAAAACTCTCACTGTCCGGCCGGAGGGGTATAAGAGTTCCTCCGAGTTGG CGCGACACTTAAGACGCCACCAACGCATCATCCATGGACTGATCACATTC CGCCCGATCTGGAGTGAATTTATCTTCACCATGCTGAGCGATTTCTATGC CGACGGGGTGCATTATGTGGAGTTGCGTTCCTCGCTGCCAAATATGTACG ATCTGGATGGAAATAATTTTACGATTTTGGAAACGGCGGAGGCCTTAGTT TCAGTATCGAATATTTTTAAAAATAGCTTCAAAGATTTCATCGGAATTAA GCTGATCTATGCTCCTTCTAGGAACTTAAATGACAGTCGAATGGATGAGT ATTTGGAAAATGCACGTCTGCTTAAGTTGCATTTTCCGAATTTCTTTGCT GGATTTGATCTTAACACCTTTGGGGACGAGTGCAATTTACCACTTTTAGA AAATGTTACTCAACTATTAAGGATTGGCAAGAATATTGACTTCTATTTCC ATGCGGGAGAGTCCCGATGTCCGGATAGTTCCCGCCCAGATGCGAATCTT TTAGAGGCATTATTGTTGCAAAGTAAACGGATCGGTAATGCCGTGAATCT ACCCTTTCATCCAGAGATTATGAAGGTCATGAAAAGGCTTAGTATAGCCG TGGAGATCTGTCCGCTGTCCAACCATTATCTGCAATACTTTAACGATTTT CGTCAACATCCGGCGGCGTATTTGATTGCCGCCGGATTTCCAATTGTAAT TGGTTCGGACTATCCGTGTTTCTGGAACTCCGCCCCTCTGACCGACGACT TTTATGTGGCCTTCGTGGGCGTGATTAGTGGGTGGGGCGATTTGCGCCTC CTAAAGCAGTTTGCCCTCAATTCGTTTCTGTTTAGCTCCCTCAGCGAAAC GGAGAAGAATATGGCCGTATCCAAGTGGCAGTGTAGCTGGAACCGATGGG TCAGAAATTTAGTCAATAGTAGTGGATACTAACAAGTAATTGTCAAATAA AAAACAAAAATTGTAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 17745575..17746567 | 993..1 | 4950 | 99.9 | Minus |
chr3L | 24539361 | chr3L | 17744567..17745206 | 1814..1175 | 3185 | 99.8 | Minus |
chr3L | 24539361 | chr3L | 17745264..17745446 | 1176..994 | 915 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 17755944..17756936 | 993..1 | 4935 | 99.8 | Minus |
3L | 28110227 | 3L | 17754931..17755575 | 1819..1175 | 3210 | 99.8 | Minus |
3L | 28110227 | 3L | 17755633..17755815 | 1176..994 | 915 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 17744583..17745204 | 1177..1798 | 99 | <- | Minus |
chr3L | 17745264..17745446 | 994..1176 | 100 | <- | Minus |
chr3L | 17745575..17746567 | 1..993 | 97 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Msi-RA | 1..1686 | 97..1782 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Msi-RA | 1..1686 | 97..1782 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Msi-RA | 1..1686 | 97..1782 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Msi-RA | 1..1798 | 1..1798 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Msi-RA | 1..1798 | 1..1798 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Msi-RA | 1..1798 | 1..1798 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 17754952..17755573 | 1177..1798 | 99 | <- | Minus |
3L | 17755633..17755815 | 994..1176 | 100 | <- | Minus |
3L | 17755944..17756936 | 1..993 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 17754952..17755573 | 1177..1798 | 99 | <- | Minus |
3L | 17755633..17755815 | 994..1176 | 100 | <- | Minus |
3L | 17755944..17756936 | 1..993 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 17754952..17755573 | 1177..1798 | 99 | <- | Minus |
3L | 17755633..17755815 | 994..1176 | 100 | <- | Minus |
3L | 17755944..17756936 | 1..993 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 17748052..17748673 | 1177..1798 | 99 | <- | Minus |
arm_3L | 17748733..17748915 | 994..1176 | 100 | <- | Minus |
arm_3L | 17749044..17750036 | 1..993 | 99 | Minus |
Translation from 96 to 1781
> FI21284.hyp MGDVEFQNVQEIRGTPQNAMRMIRLELDEEENRRQMSSSKYGGVCFHVAI AVMLCVMVLVLICSAPLGENMSNLTSEERHARLRQIYIEKERRQRLGSRM GLSPLEEEANDRLMAIRQVDEEFYNLWRNYHSQPPPFLKHLNIIDTNLYA ALKSMPKGGLLHVHDSGMLRMEILIDLIYRDNLWVCVNLEQDFEDFRFSR YFPHIPPAEDYQCNWMLMSNFFQLESRLEFENRLRKTLTVRPEGYKSSSE LARHLRRHQRIIHGLITFRPIWSEFIFTMLSDFYADGVHYVELRSSLPNM YDLDGNNFTILETAEALVSVSNIFKNSFKDFIGIKLIYAPSRNLNDSRMD EYLENARLLKLHFPNFFAGFDLNTFGDECNLPLLENVTQLLRIGKNIDFY FHAGESRCPDSSRPDANLLEALLLQSKRIGNAVNLPFHPEIMKVMKRLSI AVEICPLSNHYLQYFNDFRQHPAAYLIAAGFPIVIGSDYPCFWNSAPLTD DFYVAFVGVISGWGDLRLLKQFALNSFLFSSLSETEKNMAVSKWQCSWNR WVRNLVNSSGY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Msi-PA | 561 | CG32178-PA | 1..561 | 1..561 | 2966 | 100 | Plus |
Msi-PC | 542 | CG32178-PC | 1..542 | 20..561 | 2867 | 100 | Plus |
Msi-PB | 542 | CG32178-PB | 1..542 | 20..561 | 2867 | 100 | Plus |
Adgf-A-PB | 553 | CG5992-PB | 64..542 | 78..559 | 801 | 35.3 | Plus |
Adgf-A-PA | 553 | CG5992-PA | 64..542 | 78..559 | 801 | 35.3 | Plus |
Translation from 96 to 1781
> FI21284.pep MGDVEFQNVQEIRGTPQNAMRMIRLELDEEENRRQMSSSKYGGVCFHVAI AVMLCVMVLVLICSAPLGENMSNLTSEERHARLRQIYIEKERRQRLGSRM GLSPLEEEANDRLMAIRQVDEEFYNLWRNYHSQPPPFLKHLNIIDTNLYA ALKSMPKGGLLHVHDSGMLRMEILIDLIYRDNLWVCVNLEQDFEDFRFSR YFPHIPPAEDYQCNWMLMSNFFQLESRLEFENRLRKTLTVRPEGYKSSSE LARHLRRHQRIIHGLITFRPIWSEFIFTMLSDFYADGVHYVELRSSLPNM YDLDGNNFTILETAEALVSVSNIFKNSFKDFIGIKLIYAPSRNLNDSRMD EYLENARLLKLHFPNFFAGFDLNTFGDECNLPLLENVTQLLRIGKNIDFY FHAGESRCPDSSRPDANLLEALLLQSKRIGNAVNLPFHPEIMKVMKRLSI AVEICPLSNHYLQYFNDFRQHPAAYLIAAGFPIVIGSDYPCFWNSAPLTD DFYVAFVGVISGWGDLRLLKQFALNSFLFSSLSETEKNMAVSKWQCSWNR WVRNLVNSSGY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23891-PA | 587 | GF23891-PA | 32..583 | 14..561 | 2076 | 66.9 | Plus |
Dana\GF23892-PA | 557 | GF23892-PA | 63..539 | 76..555 | 848 | 37.2 | Plus |
Dana\GF23893-PA | 516 | GF23893-PA | 37..515 | 80..560 | 816 | 37.3 | Plus |
Dana\GF13523-PA | 550 | GF13523-PA | 30..530 | 58..559 | 718 | 33.7 | Plus |
Dana\GF18149-PA | 499 | GF18149-PA | 27..496 | 83..557 | 594 | 31.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15785-PA | 561 | GG15785-PA | 1..561 | 1..561 | 2666 | 88.8 | Plus |
Dere\GG15787-PA | 555 | GG15787-PA | 62..543 | 76..560 | 830 | 36.2 | Plus |
Dere\GG15788-PA | 520 | GG15788-PA | 43..515 | 83..556 | 807 | 38.2 | Plus |
Dere\GG22410-PA | 539 | GG22410-PA | 55..530 | 83..559 | 747 | 34.6 | Plus |
Dere\GG17028-PA | 500 | GG17028-PA | 28..497 | 83..557 | 586 | 31.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15339-PA | 572 | GH15339-PA | 51..569 | 38..556 | 1692 | 57.9 | Plus |
Dgri\GH17999-PA | 345 | GH17999-PA | 1..342 | 216..556 | 1187 | 62.1 | Plus |
Dgri\GH15341-PA | 508 | GH15341-PA | 26..508 | 76..559 | 855 | 37.9 | Plus |
Dgri\GH15340-PA | 552 | GH15340-PA | 59..534 | 78..552 | 823 | 37.3 | Plus |
Dgri\GH22920-PA | 525 | GH22920-PA | 1..515 | 48..559 | 763 | 34.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Adgf-A2-PA | 561 | CG32178-PA | 1..561 | 1..561 | 2966 | 100 | Plus |
Adgf-A2-PC | 542 | CG32178-PC | 1..542 | 20..561 | 2867 | 100 | Plus |
Adgf-A2-PB | 542 | CG32178-PB | 1..542 | 20..561 | 2867 | 100 | Plus |
Adgf-A-PB | 553 | CG5992-PB | 64..542 | 78..559 | 801 | 35.3 | Plus |
Adgf-A-PA | 553 | CG5992-PA | 64..542 | 78..559 | 801 | 35.3 | Plus |
Adgf-B-PA | 520 | CG5998-PA | 43..515 | 83..556 | 780 | 37.5 | Plus |
Adgf-E-PA | 539 | CG10143-PA | 39..527 | 67..556 | 767 | 35.8 | Plus |
Adgf-D-PA | 502 | CG9621-PA | 30..499 | 83..557 | 574 | 31.3 | Plus |
Adgf-C-PA | 506 | CG9345-PA | 4..504 | 56..559 | 473 | 28.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12943-PA | 573 | GI12943-PA | 41..570 | 28..556 | 1562 | 52.6 | Plus |
Dmoj\GI12946-PA | 522 | GI12946-PA | 25..520 | 65..561 | 867 | 37.9 | Plus |
Dmoj\GI12945-PA | 548 | GI12945-PA | 55..532 | 76..552 | 835 | 37.1 | Plus |
Dmoj\GI24423-PA | 501 | GI24423-PA | 18..497 | 75..557 | 572 | 29.3 | Plus |
Dmoj\GI23159-PA | 509 | GI23159-PA | 28..497 | 80..549 | 486 | 29.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25219-PA | 530 | GL25219-PA | 7..521 | 6..559 | 1545 | 52.2 | Plus |
Dper\GL18074-PA | 425 | GL18074-PA | 1..414 | 142..559 | 848 | 40.8 | Plus |
Dper\GL10635-PA | 531 | GL10635-PA | 34..521 | 70..559 | 780 | 34.5 | Plus |
Dper\GL24450-PA | 499 | GL24450-PA | 27..496 | 83..557 | 588 | 31.5 | Plus |
Dper\GL25221-PA | 539 | GL25221-PA | 304..538 | 322..558 | 515 | 44.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA16735-PA | 572 | GA16735-PA | 7..563 | 6..559 | 1750 | 57.2 | Plus |
Dpse\GA19282-PA | 551 | GA19282-PA | 60..540 | 76..559 | 869 | 37.8 | Plus |
Dpse\GA19286-PA | 527 | GA19286-PA | 44..527 | 75..559 | 812 | 37.7 | Plus |
Dpse\GA10106-PA | 531 | GA10106-PA | 34..521 | 70..559 | 776 | 34.3 | Plus |
Dpse\GA21919-PA | 499 | GA21919-PA | 27..496 | 83..557 | 587 | 31.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24310-PA | 561 | GM24310-PA | 1..561 | 1..561 | 2887 | 95.4 | Plus |
Dsec\GM24311-PA | 553 | GM24311-PA | 62..538 | 76..555 | 814 | 35.4 | Plus |
Dsec\GM20196-PA | 539 | GM20196-PA | 55..527 | 83..556 | 774 | 36.6 | Plus |
Dsec\GM24312-PA | 520 | GM24312-PA | 43..515 | 83..556 | 772 | 37.5 | Plus |
Dsec\GM25912-PA | 502 | GM25912-PA | 30..499 | 83..557 | 590 | 31.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12380-PA | 517 | GD12380-PA | 1..517 | 22..561 | 2649 | 92.2 | Plus |
Dsim\GD12381-PA | 553 | GD12381-PA | 62..538 | 76..555 | 820 | 35.6 | Plus |
Dsim\GD12382-PA | 520 | GD12382-PA | 43..518 | 83..559 | 798 | 37.5 | Plus |
Dsim\GD25667-PA | 539 | GD25667-PA | 55..528 | 83..557 | 773 | 36.3 | Plus |
Dsim\GD20479-PA | 502 | GD20479-PA | 30..499 | 83..557 | 591 | 31.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13086-PA | 566 | GJ13086-PA | 35..566 | 28..559 | 1628 | 54.5 | Plus |
Dvir\GJ13088-PA | 519 | GJ13088-PA | 37..519 | 76..559 | 883 | 39.1 | Plus |
Dvir\GJ13087-PA | 549 | GJ13087-PA | 52..543 | 73..560 | 799 | 36.1 | Plus |
Dvir\GJ21491-PA | 530 | GJ21491-PA | 39..515 | 82..559 | 717 | 33.8 | Plus |
Dvir\GJ14281-PA | 501 | GJ14281-PA | 26..497 | 83..557 | 550 | 29.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12326-PA | 492 | GK12326-PA | 9..491 | 75..557 | 1538 | 57.6 | Plus |
Dwil\GK12327-PA | 565 | GK12327-PA | 73..554 | 76..558 | 847 | 36.1 | Plus |
Dwil\GK12328-PA | 512 | GK12328-PA | 27..508 | 75..557 | 803 | 37.2 | Plus |
Dwil\GK19522-PA | 537 | GK19522-PA | 45..527 | 75..558 | 793 | 35.6 | Plus |
Dwil\GK13065-PA | 500 | GK13065-PA | 28..497 | 83..557 | 577 | 30.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE22123-PA | 561 | GE22123-PA | 1..561 | 1..561 | 2717 | 87.7 | Plus |
Dyak\GE22124-PA | 553 | GE22124-PA | 62..538 | 76..555 | 825 | 35.1 | Plus |
Dyak\GE22125-PA | 519 | GE22125-PA | 42..514 | 83..556 | 811 | 38.4 | Plus |
Dyak\GE12299-PA | 534 | GE12299-PA | 39..530 | 67..559 | 753 | 33.7 | Plus |
Dyak\GE24420-PA | 500 | GE24420-PA | 28..497 | 83..557 | 588 | 31.2 | Plus |