Clone FI21290 Report

Search the DGRC for FI21290

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:212
Well:90
Vector:pOT2|pOTB7_DraIII
Associated Gene/TranscriptCG3610-RA
Protein status:FI21290.pep: gold
Sequenced Size:1715

Clone Sequence Records

FI21290.complete Sequence

1715 bp assembled on 2013-09-16

GenBank Submission: BT150308.1

> FI21290.complete
CTTCAGTTAGTCAGTAGATTTCGTTAGGTTACTAGCACAAAAAAAAAACA
TTTTGAGTGAACTAATACCACTCAAAACGCCTTGACATATCACATATTTC
ATTCCCAGTTAAATTTTCCTAAGTAATTTCTTTAAAAGGAAGTGGTTTGT
TTTCTTGAACCACGATGGAAAATCTCCAACCGGAGTCGGATCGCGTTGGC
CATATTGTCTGGGATGAACCGGGAGCCTCGATTTTTGCCACCGCCTCCCA
GGAGCCCGTACCGAATCTTCTGACCGAGTTCAAACCAATGCCGAAGGGCG
AGGACGACTGTGTTTCTGATAAGGATGTGTGCCGCATTCTTACACAGTCG
TCTGTCGCGGAGAGCTCATTGTTCCGAATGGTCAAACACCAGGTGGACGA
AGTGGCCGCCATGCTCAACAGTCACCTGCATCCGCGCCAACGGAAGGAGC
AAACCGATGTGGATGTCACCCTCGGTGTAGCAAGGGAACTGGCTCGCCAG
CAGGTGGAGGCCAGTAGATGCCTTCAACTTCATCGCAATGTGGAAAATTT
GAGGGATCTCGAGATGGAAGTGGCCCGTGCCCACACAGCGTTGGCTGTTA
AGAACAAGATCACCAACAATATCAAACAAACGGTGGAAGATAAGCAGCGG
GAGCGGGCCGAAGCTTTGGCGGAACAGCGAGCCGTGGAAAAGGAGCTGAA
GGAGGAGAAGCAAAGAAGGGCTCAGAAGGCAGCCGTGTTTCGTAGAGATC
TAATGGCCCAGATTACCGAGGGGCGTACCAAGCGGATACAAGATCATCGA
ATAGCTGTGGCCGAGGGTCGTCAAGAGCTAAAGGAATGCAAGGAGATAGT
GGAGCAGGGAATCCTAAAGGATGCAGTTACAAAGGCGCAGCAGCGCAAGG
TGCTCCTCGAATCCCTAGACCAATCGGCAGCCATGTTGAAGCAAACCCGC
GAGGCCTACGCTCTGGCCCAAAAGAATAAGCCCGAGAGAGGACTCCTTGA
TGCCCTGGGACCCGTTACGGCGGCCTATGTGTCAAAGGCACGGAAACGAC
GCCTTGATGAGATCGAGGCCAGGGACATTAATGCCGCTCGGCTGGGCTTC
CAGCTCAGCCAGATCAAGCACGATCTGGAGTCCCGAGATCAAGTCATCAC
CAGTCTGCTAATCCGCGAGCACAAGGCCAAGGAGAACGCGAAGGCCTTGG
AACAGGCTAGAACCAAAATGGCCAAGAAGCAGGAGATTCGCGAACAGCTC
CTCAGCCAGCGGGAAGAGCAGAAGTTCTTCCGAGATAAGGGTGTGCAGGA
TGCCCTGGTCATGCCCAAGGATCCCATGTGCTTCGGCGAACGACAGTATC
GAATGCAAGTGGCCCAGCGGGAGAACACCCGGCGCTTGGATGTCCAATGC
TACCAGGACATGGCCCACATGGTCGTGGAGGCCAAGAATAACAGGAAAGC
CGCTGCCCAGGAGGTGGTTGACATTGTACAGGAGGTCTACAACCAACAGA
ATCGCCAGGATGAGCTTGTGGCTATTGAGCGGATGAAGCTGCTCTCCAAG
CAGCCACCTGAAGTTCTTTCAGCGCTCAAGAAATCCATTCTCACCGAAGA
GGAGATCAAGTCTTTAAACCTTAAGAAGTAGTTAATGAGTTTTCATTTAA
TACGCGCTAGATGCCCGTATTAAGGCTTGTAGAAACAAAAAATACAAAAA
AAAAAAAAAAAAAAA

FI21290.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-17 00:20:20
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 10669751..10671445 1..1695 8430 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-17 00:20:18
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 14845043..14846743 1..1701 8490 99.9 Plus
Blast to na_te.dros performed on 2019-03-17 00:20:18 has no hits.

FI21290.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-17 00:21:04 Download gff for FI21290.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 10669751..10671445 1..1695 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-09-16 14:48:02 Download gff for FI21290.complete
Subject Subject Range Query Range Percent Splice Strand
CG3610-RA 1..1467 165..1631 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:25:06 Download gff for FI21290.complete
Subject Subject Range Query Range Percent Splice Strand
CG3610-RA 1..1467 165..1631 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 14:48:02 Download gff for FI21290.complete
Subject Subject Range Query Range Percent Splice Strand
CG3610-RA 1..1695 1..1695 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:25:06 Download gff for FI21290.complete
Subject Subject Range Query Range Percent Splice Strand
CG3610-RA 1..1695 1..1695 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 00:21:04 Download gff for FI21290.complete
Subject Subject Range Query Range Percent Splice Strand
3R 14845043..14846737 1..1695 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 00:21:04 Download gff for FI21290.complete
Subject Subject Range Query Range Percent Splice Strand
3R 14845043..14846737 1..1695 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 00:21:04 Download gff for FI21290.complete
Subject Subject Range Query Range Percent Splice Strand
3R 14845043..14846737 1..1695 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 14:48:02 Download gff for FI21290.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 10670765..10672459 1..1695 99   Plus

FI21290.hyp Sequence

Translation from 164 to 1630

> FI21290.hyp
MENLQPESDRVGHIVWDEPGASIFATASQEPVPNLLTEFKPMPKGEDDCV
SDKDVCRILTQSSVAESSLFRMVKHQVDEVAAMLNSHLHPRQRKEQTDVD
VTLGVARELARQQVEASRCLQLHRNVENLRDLEMEVARAHTALAVKNKIT
NNIKQTVEDKQRERAEALAEQRAVEKELKEEKQRRAQKAAVFRRDLMAQI
TEGRTKRIQDHRIAVAEGRQELKECKEIVEQGILKDAVTKAQQRKVLLES
LDQSAAMLKQTREAYALAQKNKPERGLLDALGPVTAAYVSKARKRRLDEI
EARDINAARLGFQLSQIKHDLESRDQVITSLLIREHKAKENAKALEQART
KMAKKQEIREQLLSQREEQKFFRDKGVQDALVMPKDPMCFGERQYRMQVA
QRENTRRLDVQCYQDMAHMVVEAKNNRKAAAQEVVDIVQEVYNQQNRQDE
LVAIERMKLLSKQPPEVLSALKKSILTEEEIKSLNLKK*

FI21290.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:01:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG3610-PA 488 CG3610-PA 1..488 1..488 2424 100 Plus
CG7352-PA 466 CG7352-PA 38..445 67..476 222 23.1 Plus
CG7352-PC 394 CG7352-PC 14..373 114..476 208 23.4 Plus

FI21290.pep Sequence

Translation from 164 to 1630

> FI21290.pep
MENLQPESDRVGHIVWDEPGASIFATASQEPVPNLLTEFKPMPKGEDDCV
SDKDVCRILTQSSVAESSLFRMVKHQVDEVAAMLNSHLHPRQRKEQTDVD
VTLGVARELARQQVEASRCLQLHRNVENLRDLEMEVARAHTALAVKNKIT
NNIKQTVEDKQRERAEALAEQRAVEKELKEEKQRRAQKAAVFRRDLMAQI
TEGRTKRIQDHRIAVAEGRQELKECKEIVEQGILKDAVTKAQQRKVLLES
LDQSAAMLKQTREAYALAQKNKPERGLLDALGPVTAAYVSKARKRRLDEI
EARDINAARLGFQLSQIKHDLESRDQVITSLLIREHKAKENAKALEQART
KMAKKQEIREQLLSQREEQKFFRDKGVQDALVMPKDPMCFGERQYRMQVA
QRENTRRLDVQCYQDMAHMVVEAKNNRKAAAQEVVDIVQEVYNQQNRQDE
LVAIERMKLLSKQPPEVLSALKKSILTEEEIKSLNLKK*

FI21290.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:55:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF19498-PA 569 GF19498-PA 88..569 5..488 1308 56 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:55:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG16878-PA 488 GG16878-PA 1..488 1..488 2224 87.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:55:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH24395-PA 507 GH24395-PA 14..494 7..486 485 30.4 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:23:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG3610-PA 488 CG3610-PA 1..488 1..488 2424 100 Plus
CG7352-PA 466 CG7352-PA 38..445 67..476 222 23.1 Plus
CG7352-PC 394 CG7352-PC 14..373 114..476 208 23.4 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:55:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI15335-PA 504 GI15335-PA 14..492 7..486 494 30.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:55:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL26723-PA 480 GL26723-PA 15..474 10..486 673 34.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:55:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA23029-PA 495 GA23029-PA 15..489 10..486 732 36.1 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:55:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM24187-PA 488 GM24187-PA 1..488 1..488 2470 96.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:55:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD18979-PA 488 GD18979-PA 1..488 1..488 2448 96.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:55:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ14772-PA 505 GJ14772-PA 14..492 7..486 538 30.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:55:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE24259-PA 488 GE24259-PA 1..488 1..488 2278 88.9 Plus