Clone FI21293 Report

Search the DGRC for FI21293

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:212
Well:93
Vector:pOT2|pOTB7_DraIII
Associated Gene/TranscriptCG13148-RA
Protein status:FI21293.pep: gold
Sequenced Size:1644

Clone Sequence Records

FI21293.complete Sequence

1644 bp assembled on 2013-06-21

GenBank Submission: BT150128.1

> FI21293.complete
CTTTCCAATCACATAAAGTCATTCCAGTGAGGCTGTGGCTGCGGCTAACA
GACCTGCGAAGTCAGAGTGCAAAGTGCGCAGATGCTGCACTCCGGCGCCC
ACTGCACCGCCCAGCCACCCAACCACACCATTCTAGAGGCCCATTTCTTG
GAAACTAATACCACTACTCCTCGGCTAGCCGCAGCCTCCCATCTTTTCCA
GATCTAAGAGCGAGCGAGAGAGGAGCGGAGAAGGCGCGAGAGAGTAGGCG
CACTCGAAGTTCACGTTCACGGCGCCTGGAAGCTGCAGCCCGAAAATTGT
CCTGTTAGTACGAGAAAACTATTGACAGGCGAAAGGTCTAAAATTGCTCA
TATTCTGGCAGAAAAGGCAGATTGGACTTCAAAAGTCTGATAGCCGCAAT
GGCTCAAGTTCAGCTCAACGCAGGAAATGGGCAAGCCCCAAGCAACGGAA
ATAATGTCGAGGATAATGAACCCTATCAAATAAGTGACGATGATTTGGAT
GACCTGGATGATGATTGCTTGCTCGAGGAGGCAGATACCTCAGGGGCAGG
CAATAATGTGGGACGTGGTCCGTACGAGCGTGCTTGGACCACGGAGGCCA
CCAGAGCATTGATTCACATACGCGGTCCCATGGAGGGTAGCTTTACAGAG
GGCAGACAAAAACGGACTGCTCTTTGGCTGCACTGCACCCGGCAACTACA
GCGACTGGGATTTCGCTACTCCGCCGCAAAGGTGCAGAAGAAGTGGCATA
ACATCCTCATCACCTACAACAAGAATCTGAACAAAAAATACGTATCCGGC
TATGTGCACTGGGAGTTCTTCGAGGAGATGTTCAAGTATCTGCAGGGCAA
GAAGGCCGACTTTGATATGCAGTTGCCACAACAGACCTCAAATGCGCCAC
AAGCTCCACATTCTGCTAATGGGCAAAACCCGAATCCGGGTATTCCCCAG
CAACCTTTACAGCTTCAACCTACTCCGGTGAGCCTAAAGCCGGGAACACC
CCAAATGCAGGTGCAACTTCCACCCCAGACTGCGGCCAAGGACAGCCAGC
CGTATATTACACCTGTGGATCAGGTCCTGCTGCAGGCCCAGATGAATCTG
GACAGCAAGTCCAACGATGAGTTCGATGAGGATAGCAACAGCATGTCTGA
GGTAGTACGTCAACCCAAGATGGAGTACGATGGCGATCAAGTTGCGGAGG
CGGAACGTACAAACGATAGCAGCCAACATCTGGAAGTTAATGGCAAGCTC
TACGATCTGGCACGACCCATGGGCTCGCACCAAGCTTCTGGCATCCCCGA
TGACATCTGGTGGAAGGACTACTTTGAAAGAAAACTGGAAGTGGAGCGGG
AGAAGATAGAGCTACAACGGAGTTTGCAGCGCGAACAGGTGCAGATCCAA
AAAATGTCACTGGTGCAGCAGGAGCGGATTGAGCGCATGAAGATCGATGC
CATCAACAGCCTGACGGGCACGCTGCAAAAGTTGGTGGAGGCCAAGTGCC
GCCGGGCCTAAGATGAATCTGTTCCCTCCCAGTAAATTTCGATAACTTTA
GGCTTCGATTCGTCTGTATCTAGTTGGGTGTGTAAATACAATTTCGGCTA
ACTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

FI21293.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 14:31:16
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 8575099..8576049 653..1603 4710 99.7 Plus
chr2R 21145070 chr2R 8573873..8574343 1..471 2310 99.4 Plus
chr2R 21145070 chr2R 8574860..8575043 472..655 875 98.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 14:31:14
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 12687836..12688790 653..1607 4685 99.4 Plus
2R 25286936 2R 12686609..12687079 1..471 2310 99.4 Plus
2R 25286936 2R 12687597..12687780 472..655 875 98.4 Plus
Blast to na_te.dros performed on 2019-03-15 14:31:14 has no hits.

FI21293.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 14:32:13 Download gff for FI21293.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 8573873..8574343 1..471 99 -> Plus
chr2R 8574860..8575043 472..655 98 -> Plus
chr2R 8575102..8576049 656..1603 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2013-06-21 12:43:31 Download gff for FI21293.complete
Subject Subject Range Query Range Percent Splice Strand
CG13148-RB 1..1113 399..1511 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 00:32:28 Download gff for FI21293.complete
Subject Subject Range Query Range Percent Splice Strand
CG13148-RA 1..1113 399..1511 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:01:02 Download gff for FI21293.complete
Subject Subject Range Query Range Percent Splice Strand
CG13148-RA 1..1113 399..1511 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-06-21 12:43:31 Download gff for FI21293.complete
Subject Subject Range Query Range Percent Splice Strand
CG13148-RA 1..1603 1..1603 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:32:28 Download gff for FI21293.complete
Subject Subject Range Query Range Percent Splice Strand
CG13148-RA 1..1603 1..1603 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:01:02 Download gff for FI21293.complete
Subject Subject Range Query Range Percent Splice Strand
CG13148-RA 1..1603 1..1603 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:32:13 Download gff for FI21293.complete
Subject Subject Range Query Range Percent Splice Strand
2R 12686609..12687079 1..471 99 -> Plus
2R 12687597..12687780 472..655 98 -> Plus
2R 12687839..12688786 656..1603 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:32:13 Download gff for FI21293.complete
Subject Subject Range Query Range Percent Splice Strand
2R 12686609..12687079 1..471 99 -> Plus
2R 12687597..12687780 472..655 98 -> Plus
2R 12687839..12688786 656..1603 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:32:13 Download gff for FI21293.complete
Subject Subject Range Query Range Percent Splice Strand
2R 12686609..12687079 1..471 99 -> Plus
2R 12687597..12687780 472..655 98 -> Plus
2R 12687839..12688786 656..1603 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:32:28 Download gff for FI21293.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 8574114..8574584 1..471 99 -> Plus
arm_2R 8575102..8575285 472..655 98 -> Plus
arm_2R 8575344..8576291 656..1603 99   Plus

FI21293.hyp Sequence

Translation from 398 to 1510

> FI21293.hyp
MAQVQLNAGNGQAPSNGNNVEDNEPYQISDDDLDDLDDDCLLEEADTSGA
GNNVGRGPYERAWTTEATRALIHIRGPMEGSFTEGRQKRTALWLHCTRQL
QRLGFRYSAAKVQKKWHNILITYNKNLNKKYVSGYVHWEFFEEMFKYLQG
KKADFDMQLPQQTSNAPQAPHSANGQNPNPGIPQQPLQLQPTPVSLKPGT
PQMQVQLPPQTAAKDSQPYITPVDQVLLQAQMNLDSKSNDEFDEDSNSMS
EVVRQPKMEYDGDQVAEAERTNDSSQHLEVNGKLYDLARPMGSHQASGIP
DDIWWKDYFERKLEVEREKIELQRSLQREQVQIQKMSLVQQERIERMKID
AINSLTGTLQKLVEAKCRRA*

FI21293.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:55:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG13148-PD 370 CG13148-PD 1..370 1..370 1952 100 Plus
CG13148-PC 370 CG13148-PC 1..370 1..370 1952 100 Plus
CG13148-PA 370 CG13148-PA 1..370 1..370 1952 100 Plus
CG13148-PB 370 CG13148-PB 1..370 1..370 1952 100 Plus

FI21293.pep Sequence

Translation from 398 to 1510

> FI21293.pep
MAQVQLNAGNGQAPSNGNNVEDNEPYQISDDDLDDLDDDCLLEEADTSGA
GNNVGRGPYERAWTTEATRALIHIRGPMEGSFTEGRQKRTALWLHCTRQL
QRLGFRYSAAKVQKKWHNILITYNKNLNKKYVSGYVHWEFFEEMFKYLQG
KKADFDMQLPQQTSNAPQAPHSANGQNPNPGIPQQPLQLQPTPVSLKPGT
PQMQVQLPPQTAAKDSQPYITPVDQVLLQAQMNLDSKSNDEFDEDSNSMS
EVVRQPKMEYDGDQVAEAERTNDSSQHLEVNGKLYDLARPMGSHQASGIP
DDIWWKDYFERKLEVEREKIELQRSLQREQVQIQKMSLVQQERIERMKID
AINSLTGTLQKLVEAKCRRA*

FI21293.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 12:21:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF11807-PA 381 GF11807-PA 1..381 1..370 1364 74.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 12:21:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG20329-PA 370 GG20329-PA 1..370 1..370 1783 93.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 12:21:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH21925-PA 373 GH21925-PA 1..373 1..370 1162 67.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:19:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG13148-PD 370 CG13148-PD 1..370 1..370 1952 100 Plus
CG13148-PC 370 CG13148-PC 1..370 1..370 1952 100 Plus
CG13148-PA 370 CG13148-PA 1..370 1..370 1952 100 Plus
CG13148-PB 370 CG13148-PB 1..370 1..370 1952 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 12:21:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI19632-PA 355 GI19632-PA 1..355 1..370 1120 68.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 12:21:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL16734-PA 367 GL16734-PA 1..367 1..370 1306 72.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 12:21:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA12078-PA 370 GA12078-PA 1..370 1..370 1301 71.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 12:21:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM21417-PA 370 GM21417-PA 1..370 1..370 1930 96.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 12:21:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD10912-PA 370 GD10912-PA 1..370 1..370 1950 97.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 12:21:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ14998-PA 357 GJ14998-PA 20..357 19..370 1179 73.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 12:21:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK21612-PA 381 GK21612-PA 1..381 1..370 1114 68.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 12:21:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE12488-PA 370 GE12488-PA 1..370 1..370 1789 93.8 Plus