Clone FI21338 Report

Search the DGRC for FI21338

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:213
Well:38
Vector:pOT2|pOTB7_DraIII
Associated Gene/TranscriptPPO3-RA
Protein status:FI21338.pep: gold
Sequenced Size:2230

Clone Sequence Records

FI21338.complete Sequence

2230 bp assembled on 2013-06-25

GenBank Submission: BT150140.1

> FI21338.complete
AGCAACTGCTCGCTAAAGGTCCTCCTAATCGCGAATCCATCGAAAATGGC
CGACAAGAAGAATCTGCTCCTTCTGTTCGATCATCCCACGGAGCCCGTGT
TCATGGACAAGGGTGGCAATGGCACCGTCTTCGACGTGCCCGACTCCTAC
GTGACCGATCGCTACAACCAGATGTGCAAGAAGGTCCAGCGGCGCGTGAG
CAGCGCGTCCGAGAAGAACGTCCAGGTCAAGGAGATCGCCATACCGGATC
TCAGTTGCTCCATGAGACTGGGCCGCTCGGAGCAGTTCTCGATCTTCCTG
AAGTCCCACCGCAAGATGGCCAGCCACCTAATCGAGATCTTCACCAAAAT
GCAGACCGTGGATGAGCTGCAGAGCGTGGCGGTGTACGCCAGGGATCGCG
TCAATCCGGTGCTCTTCAACTACGCCTTGTCGGTGGCCCTGCTCCACCGT
CCGGACACCAAGGATCTCGAACTGCCCGCCTTCGCGCAGACCTTCCCGGA
TCGCTTCATCGACTCGAAGATGCTTCGCAGCATGCGCGAGGAGTCCTTTG
TGGTGGAGCGCTCCGCCGCCCGCCTGCCCGTCGTCAGTTCGGTCAAGTAC
ACCGCCTCCGATCTCGATGTGGAGCACCGGCTGTGGTATTTCCGCGAGGA
CCTGGGCGTCAACCTGCACCACTGGCACTGGCATCTGGTCTATCCCATCG
AGGCGCCCGACCGCAGCATCGTGGACAAGGACCGTCGTGGCGAGCTGTTC
TACTATATGCACCAGCAGATCATTGCCCGCTACAATGCCGAGCGGCTGAG
CAACCACATGGCCCGGGTGCAGCCGTTCAACAACCTGGACGAACCCATTG
CCGAGGGCTACTTCCCCAAGATGGACTCGCTGGTGGCCAGTAGGGCGTAT
CCTCCGCGCTTCGACAACACCCGGCTGAGCGACGTGGACCGGCCCAACAA
CCAGTTGAGGGTTGGCATCGATGATATGAAGCGCTGGCGCGAACGCATCT
ACGAGGCCATCCATCAGGGCTACGTTTTGGATACGAACAATGAAAAGATC
GTGCTGGATGACGCTAAGGGCATCGACATCCTGGGCAACATCATCGAGGC
TTCCGATCTGACGCCCAACAGTACGCTGTACGGCGACTTCCACAACATGG
GGCACATACTGATTGCCTACTCACACGATCCGACCAACAAGCACCTGGAG
TACGCGGGCGTGATGGGCGACGCCTCCACCGCGATGCGCGATCCGATCTT
CTACAAGTGGCACGCCTTCATCGACAATATGTTCCAGGAGCACAAACGTC
TGCTTTCTCCCTATGAGAAGCAAGAGCTCAGCTTTCCGGACGTTCGCGTC
GAGAGCATCCAGGTGGAGAGCCAGGGTCAGGTCAACAGGCTAACCACCTT
CTGGCAGGAGTCCGATGTGGACATGTCCCGTGGCCTTGATTTTGTGCCGC
GCGGCCATGTCCTCGCTCGGTTCACCCATCTGCAGCACCACGAATTCAGC
TACACCATCAAGGTGGAGAACTCCAGCGAGGCCACGCGGTATGGCTACGT
GCGCATCTTCCTGGCGCCCAAGCTGGATGATCGCAATGCACCCATGCTGC
TGGAGCAACAGCGCCTGATGATGGTGGAGCTGGACAAGTTCGTGGTTACC
ATGCCTCCCGGCAGCCATACGATCACCCGGAACTCCACGGAGTCGAGTGT
CACCATTCCGTTCGAGCGCACCTTCCGCAACCTGGACAAGCTGGAGGAGC
TGCAGAACTTCTTGTGCGGCTGCGGTTGGCCCCAGCACATGCTGATTCCG
AAGGGTCGGCCCGAGGGTCTGCGCTTCGAGCTCTTCGTCATGGTTTCCAA
CTACGAAGAGGATAAGGTTGACCAGACGGTCGCAGATTGCGGCTGCAGCA
TCGCCGCTTCCTACTGCGGCCTGCGCGATCGCCTCTATCCGGATCGCAAG
TCCATGGGCTTCCCCTTCGATCGCAAGCCGCGTCGAGGCTCCGAGATCCT
GGAGAACTTCCTGACGCCCAACATGTGCGCCGTGGAGGTCATCATTACCC
ACGAGGACCGCACCGAGAAGCTTCGCGAGGTACCAGCTCGCTCCTGAATA
AGAGAAGCATCTTGTTATGGCCAGTTTCATTTGTTGGCTTAAAGAGAAGC
CACTAATAACGGTCTATAGCTTTCTCGCTGTGTAGAAAATACCAAATAAA
ATAATGAAATACTAAAAAAAAAAAAAAAAA

FI21338.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 14:31:52
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 18951248..18952279 1..1032 5145 99.9 Plus
chr2R 21145070 chr2R 18952500..18953240 1128..1868 3690 99.9 Plus
chr2R 21145070 chr2R 4931225..4932195 1010..37 1865 79.7 Minus
chr2R 21145070 chr2R 18953299..18953647 1865..2213 1745 100 Plus
chr2R 21145070 chr2R 4930383..4930948 1736..1174 530 73.3 Minus
chr2R 21145070 chr2R 18952344..18952439 1033..1128 480 100 Plus
chr2R 21145070 chr2R 4929980..4930142 2065..1903 245 76.7 Minus
chr2R 21145070 chr2R 4930245..4930355 1853..1743 225 80.2 Minus
chr2R 21145070 chr2R 13776190..13776259 794..725 200 85.7 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 14:31:51
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 23064784..23065815 1..1032 4965 98.7 Plus
2R 25286936 2R 23066036..23066776 1128..1868 3690 99.9 Plus
2R 25286936 2R 9043659..9044629 1010..37 1820 79.4 Minus
2R 25286936 2R 23066835..23067184 1865..2214 1720 99.4 Plus
2R 25286936 2R 9042817..9043382 1736..1174 530 73.3 Minus
2R 25286936 2R 23065880..23065975 1033..1128 480 100 Plus
2R 25286936 2R 9042414..9042576 2065..1903 245 76.7 Minus
2R 25286936 2R 9042679..9042789 1853..1743 225 80.2 Minus
2R 25286936 2R 17889020..17889089 794..725 200 85.7 Minus
Blast to na_te.dros performed on 2019-03-15 14:31:51 has no hits.

FI21338.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 14:32:31 Download gff for FI21338.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 18951248..18952279 1..1032 99 -> Plus
chr2R 18952344..18952439 1033..1128 100 -> Plus
chr2R 18952501..18953238 1129..1866 99 -> Plus
chr2R 18953301..18953647 1867..2213 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2013-06-26 12:40:13 Download gff for FI21338.complete
Subject Subject Range Query Range Percent Splice Strand
CG42640-RA 1..2052 46..2097 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 00:33:23 Download gff for FI21338.complete
Subject Subject Range Query Range Percent Splice Strand
proPO59-RA 1..2052 46..2097 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:01:42 Download gff for FI21338.complete
Subject Subject Range Query Range Percent Splice Strand
PPO3-RA 1..2052 46..2097 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-06-26 12:40:13 Download gff for FI21338.complete
Subject Subject Range Query Range Percent Splice Strand
CG42640-RA 1..2213 1..2213 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:33:23 Download gff for FI21338.complete
Subject Subject Range Query Range Percent Splice Strand
proPO59-RA 16..2228 1..2213 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:01:42 Download gff for FI21338.complete
Subject Subject Range Query Range Percent Splice Strand
PPO3-RA 16..2228 1..2213 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:32:31 Download gff for FI21338.complete
Subject Subject Range Query Range Percent Splice Strand
2R 23064784..23065815 1..1032 98 -> Plus
2R 23065880..23065975 1033..1128 100 -> Plus
2R 23066037..23066774 1129..1866 99 -> Plus
2R 23066837..23067183 1867..2213 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:32:31 Download gff for FI21338.complete
Subject Subject Range Query Range Percent Splice Strand
2R 23064784..23065815 1..1032 98 -> Plus
2R 23065880..23065975 1033..1128 100 -> Plus
2R 23066037..23066774 1129..1866 99 -> Plus
2R 23066837..23067183 1867..2213 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:32:31 Download gff for FI21338.complete
Subject Subject Range Query Range Percent Splice Strand
2R 23064784..23065815 1..1032 98 -> Plus
2R 23065880..23065975 1033..1128 100 -> Plus
2R 23066037..23066774 1129..1866 99 -> Plus
2R 23066837..23067183 1867..2213 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:33:23 Download gff for FI21338.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 18953403..18953498 1033..1128 100 -> Plus
arm_2R 18952307..18953338 1..1032 98 -> Plus
arm_2R 18953560..18954297 1129..1866 99 -> Plus
arm_2R 18954360..18954706 1867..2213 99   Plus

FI21338.hyp Sequence

Translation from 0 to 2096

> FI21338.hyp
SNCSLKVLLIANPSKMADKKNLLLLFDHPTEPVFMDKGGNGTVFDVPDSY
VTDRYNQMCKKVQRRVSSASEKNVQVKEIAIPDLSCSMRLGRSEQFSIFL
KSHRKMASHLIEIFTKMQTVDELQSVAVYARDRVNPVLFNYALSVALLHR
PDTKDLELPAFAQTFPDRFIDSKMLRSMREESFVVERSAARLPVVSSVKY
TASDLDVEHRLWYFREDLGVNLHHWHWHLVYPIEAPDRSIVDKDRRGELF
YYMHQQIIARYNAERLSNHMARVQPFNNLDEPIAEGYFPKMDSLVASRAY
PPRFDNTRLSDVDRPNNQLRVGIDDMKRWRERIYEAIHQGYVLDTNNEKI
VLDDAKGIDILGNIIEASDLTPNSTLYGDFHNMGHILIAYSHDPTNKHLE
YAGVMGDASTAMRDPIFYKWHAFIDNMFQEHKRLLSPYEKQELSFPDVRV
ESIQVESQGQVNRLTTFWQESDVDMSRGLDFVPRGHVLARFTHLQHHEFS
YTIKVENSSEATRYGYVRIFLAPKLDDRNAPMLLEQQRLMMVELDKFVVT
MPPGSHTITRNSTESSVTIPFERTFRNLDKLEELQNFLCGCGWPQHMLIP
KGRPEGLRFELFVMVSNYEEDKVDQTVADCGCSIAASYCGLRDRLYPDRK
SMGFPFDRKPRRGSEILENFLTPNMCAVEVIITHEDRTEKLREVPARS*

FI21338.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2015-02-20 14:40:22
Subject Length Description Subject Range Query Range Score Percent Strand
PPO3-PA 683 CG2952-PA 1..683 16..698 3603 100 Plus
PPO2-PA 684 CG8193-PA 1..679 16..688 2472 68 Plus
PPO1-PA 690 CG42639-PA 5..685 18..687 1656 47.7 Plus
Lsp2-PB 701 CG6806-PB 97..695 96..686 490 25.5 Plus
Lsp2-PA 701 CG6806-PA 97..695 96..686 490 25.5 Plus

FI21338.pep Sequence

Translation from 45 to 2096

> FI21338.pep
MADKKNLLLLFDHPTEPVFMDKGGNGTVFDVPDSYVTDRYNQMCKKVQRR
VSSASEKNVQVKEIAIPDLSCSMRLGRSEQFSIFLKSHRKMASHLIEIFT
KMQTVDELQSVAVYARDRVNPVLFNYALSVALLHRPDTKDLELPAFAQTF
PDRFIDSKMLRSMREESFVVERSAARLPVVSSVKYTASDLDVEHRLWYFR
EDLGVNLHHWHWHLVYPIEAPDRSIVDKDRRGELFYYMHQQIIARYNAER
LSNHMARVQPFNNLDEPIAEGYFPKMDSLVASRAYPPRFDNTRLSDVDRP
NNQLRVGIDDMKRWRERIYEAIHQGYVLDTNNEKIVLDDAKGIDILGNII
EASDLTPNSTLYGDFHNMGHILIAYSHDPTNKHLEYAGVMGDASTAMRDP
IFYKWHAFIDNMFQEHKRLLSPYEKQELSFPDVRVESIQVESQGQVNRLT
TFWQESDVDMSRGLDFVPRGHVLARFTHLQHHEFSYTIKVENSSEATRYG
YVRIFLAPKLDDRNAPMLLEQQRLMMVELDKFVVTMPPGSHTITRNSTES
SVTIPFERTFRNLDKLEELQNFLCGCGWPQHMLIPKGRPEGLRFELFVMV
SNYEEDKVDQTVADCGCSIAASYCGLRDRLYPDRKSMGFPFDRKPRRGSE
ILENFLTPNMCAVEVIITHEDRTEKLREVPARS*

FI21338.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 01:24:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF12716-PA 682 GF12716-PA 1..677 1..673 2495 67.3 Plus
Dana\GF13216-PA 701 GF13216-PA 4..684 2..673 1710 48.8 Plus
Dana\GF23589-PA 700 GF23589-PA 90..694 75..671 498 25.5 Plus
Dana\GF14363-PA 772 GF14363-PA 278..757 193..678 376 25.2 Plus
Dana\GF16081-PA 791 GF16081-PA 247..771 163..683 372 25.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 01:24:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG22822-PA 683 GG22822-PA 1..683 1..683 3289 88.6 Plus
Dere\GG10592-PA 684 GG10592-PA 1..679 1..673 2511 68.3 Plus
Dere\GG21008-PA 690 GG21008-PA 4..685 2..672 1714 48.7 Plus
Dere\GG15559-PA 837 GG15559-PA 233..807 81..643 489 25.2 Plus
Dere\GG17724-PA 805 GG17724-PA 300..785 193..683 406 26.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 01:24:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH20258-PA 684 GH20258-PA 1..679 1..673 2487 66.1 Plus
Dgri\GH21740-PA 688 GH21740-PA 3..686 2..673 1737 48 Plus
Dgri\GH21006-PA 702 GH21006-PA 98..696 81..671 503 25.6 Plus
Dgri\GH23649-PA 771 GH23649-PA 255..744 183..674 387 27.3 Plus
Dgri\GH23643-PA 788 GH23643-PA 270..759 183..674 385 27.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:16:49
Subject Length Description Subject Range Query Range Score Percent Strand
PPO3-PA 683 CG2952-PA 1..683 1..683 3603 100 Plus
PPO2-PA 684 CG8193-PA 1..679 1..673 2472 68 Plus
PPO1-PA 690 CG42639-PA 5..685 3..672 1656 47.7 Plus
Lsp2-PB 701 CG6806-PB 97..695 81..671 490 25.5 Plus
Lsp2-PA 701 CG6806-PA 97..695 81..671 490 25.5 Plus
Lsp1alpha-PA 816 CG2559-PA 311..788 193..675 401 26.7 Plus
Lsp1beta-PB 789 CG4178-PB 284..760 193..674 382 26 Plus
Lsp1beta-PA 789 CG4178-PA 284..760 193..674 382 26 Plus
Lsp1gamma-PA 772 CG6821-PA 266..757 183..678 355 25.5 Plus
Fbp1-PB 997 CG17285-PB 580..997 229..671 196 22.3 Plus
Fbp1-PD 1027 CG17285-PD 610..1027 229..671 196 22.3 Plus
Fbp1-PA 1029 CG17285-PA 612..1029 229..671 196 22.3 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 01:24:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI19427-PA 684 GI19427-PA 1..679 1..673 2485 66.7 Plus
Dmoj\GI19287-PA 688 GI19287-PA 3..685 2..672 1702 47 Plus
Dmoj\GI20647-PA 701 GI20647-PA 91..695 75..671 535 27.1 Plus
Dmoj\GI18059-PA 773 GI18059-PA 276..758 190..678 363 25.5 Plus
Dmoj\GI23074-PA 788 GI23074-PA 282..759 193..674 359 25.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 01:24:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL16858-PA 685 GL16858-PA 1..679 1..673 2520 68.3 Plus
Dper\GL10548-PA 690 GL10548-PA 4..685 2..672 1696 47.5 Plus
Dper\GL17278-PA 701 GL17278-PA 97..695 81..671 489 26 Plus
Dper\GL26223-PA 773 GL26223-PA 275..757 190..678 384 26.3 Plus
Dper\GL23266-PA 566 GL23266-PA 18..537 152..674 380 25.8 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 01:24:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA20885-PA 685 GA20885-PA 1..679 1..673 2518 68.3 Plus
Dpse\GA19121-PA 690 GA19121-PA 4..686 2..673 1699 47.6 Plus
Dpse\GA24161-PA 701 GA24161-PA 97..695 81..671 489 26 Plus
Dpse\GA28082-PA 773 GA28082-PA 275..757 190..678 386 26.5 Plus
Dpse\GA27203-PA 787 GA27203-PA 239..758 152..674 384 25.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 01:24:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM20638-PA 684 GM20638-PA 1..679 1..673 2511 67.8 Plus
Dsec\GM15980-PA 669 GM15980-PA 316..669 330..683 1843 93.8 Plus
Dsec\GM16855-PA 364 GM16855-PA 1..360 1..361 1394 71.2 Plus
Dsec\GM19941-PA 763 GM19941-PA 4..329 2..329 811 47.4 Plus
Dsec\GM25327-PA 828 GM25327-PA 224..822 81..671 490 25.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 01:24:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD11733-PA 683 GD11733-PA 1..683 1..683 3591 97.2 Plus
Dsim\GD10111-PA 666 GD10111-PA 1..661 1..673 2360 64.5 Plus
Dsim\GD25430-PA 690 GD25430-PA 4..685 2..672 1705 48.1 Plus
Dsim\GD14358-PA 749 GD14358-PA 145..743 81..671 487 25.4 Plus
Dsim\GD17082-PA 788 GD17082-PA 283..760 193..675 398 27 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 01:24:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ21181-PA 684 GJ21181-PA 1..681 1..675 2518 67.2 Plus
Dvir\GJ22164-PA 688 GJ22164-PA 3..686 2..673 1746 48.4 Plus
Dvir\GJ21616-PA 701 GJ21616-PA 97..696 81..672 489 26.2 Plus
Dvir\GJ16457-PA 773 GJ16457-PA 276..758 190..678 400 26.5 Plus
Dvir\GJ22590-PA 788 GJ22590-PA 273..759 187..674 379 26.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 01:24:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK17810-PA 684 GK17810-PA 1..679 1..673 2431 65.1 Plus
Dwil\GK22067-PA 691 GK22067-PA 4..686 2..672 1694 46.6 Plus
Dwil\GK19679-PA 701 GK19679-PA 97..671 81..643 480 26 Plus
Dwil\GK11112-PA 787 GK11112-PA 270..758 183..674 372 26.7 Plus
Dwil\GK11980-PA 787 GK11980-PA 270..758 183..674 372 26.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 01:24:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE14257-PA 683 GE14257-PA 1..683 1..683 3280 87.4 Plus
Dyak\GE10651-PA 692 GE10651-PA 1..688 1..679 2761 71.3 Plus
Dyak\GE22642-PA 684 GE22642-PA 1..679 1..673 2499 67.8 Plus
Dyak\GE13951-PA 690 GE13951-PA 4..685 2..672 1706 48.4 Plus
Dyak\GE21884-PA 737 GE21884-PA 133..731 81..671 483 25.2 Plus