Clone FI21646 Report

Search the DGRC for FI21646

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:216
Well:46
Vector:pOT2|pOTB7_DraIII
Associated Gene/TranscriptCG12018-RA
Protein status:FI21646.pep: gold
Sequenced Size:1420

Clone Sequence Records

FI21646.complete Sequence

1420 bp assembled on 2013-09-19

GenBank Submission: BT150296.1

> FI21646.complete
GCGTCTTGGAATAATATAACTTAGTTTGCTCCTAAATATATCGACGGAAT
CATGACCAACCGCCTGGAGACCAAATACGAGAACCTGAGCAGCATTTTCC
GGCTAAAGGGACATGACTACCAAAAGCAGTTCTTCCATCTGTATGCCCAC
CGCCTGGCCGAGATGACGCGTCTCCTAACGCCGCTGGCCCAGAAGAAGTG
GGGCAACAAGGAGCCCATCAAAAAACTGTGTGAGCTGCGGGGTGAACAGG
ACGTGCACTGCATCCTGATCGGCACCATTTTTAAGCACCAGGCTCACAAG
CCCAGTATCCTCCGGGACATTTCTGAGGAGAATCAGTTAGCGCCACAGCC
GCCAAGACAGAACTACTCGGATCCGGAGGACAAGATTGTTCTGGAGGATG
AACTGCAGCGGGTTCGACTTCAGGGCAAGCTAAATGGACAGCTCTTAGCC
ACTGGAGTTGTGTGCGCTGCCCTCGGTGGAACAGACAGTGACGGATTTTT
TAACGTGGAGGATATACTCTTCTACGAAAGTGGACCTCAAAAGCCACTGG
CCCCCATTAAAAGAAGCCGCCTCCTGGTGCTGGCGTCTGGGTTGGACCAA
CTGCAGGCCCACAAATTTGTGGAGGCATTGAATCTCTTTCAGTACTGGCT
GGCCGGCAGTCTTGGAAACAACAAGGAAGCGGGCTCCATGGTGCGTCTTA
TCGTGGCTGGAAATTCGGTGAGAGCCAGTGCCATGGCACATGTGCCCACC
CTACAGGTGGCACGCACCCAGGCGAACGCAAATGACACAGTCCAGGCCGT
TTCCCAGCTAGACCAGTGGTTTGCCTCATGGGCACGCAGTCTGCCCGTCG
ACATAATGCCGGGACCCTACGACCCGGCCAACTTTATGCTGCCCCAGCAG
CCGTTCCACAAGTGCATGTTTCCCCAGGCTGCTCAACTGGCAACTTTCCA
GGCGGTGACTAATCCGTACAGCTGCCGGCTGGATGAGGCCCTGGTGGTAG
GCACATCTGGCCAGAATGTATCGGATCTGTTGCGCAGCACTTCGCTGGAC
TCGGCGCTGGAGGCCCTTCGCTGCACCCTCACCTGGGGACATGTTGCTCC
CACTGCACCGGACACTCTAGCCTGCTACCCGTACATCGAAAGTGATCCCT
TCATCCTGCGCGAGTGTCCGCACGTTTACTACGCCGGCAACTGCGAGTCG
TTTGCGACCGAGCTGCACGAGGGTTCCGAAGGCAAGCGCACCCGCCTAGT
CTGCGTGCCCAGTTTTAGCAAAACGCAGAGTGTGGCCGTCGTGGACCTGG
ATACGCTGGATTGCCGCATGGTCAACTTTAGCGTAGATGCAGAATAAGAA
ACTCCATTAATACAAAAAATACACCCTGTTAAGTCTTGAGAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAA

FI21646.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-17 00:25:06
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 1775202..1776579 13..1390 6770 99.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-17 00:25:04
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 1775642..1777021 13..1392 6780 99.4 Plus
Blast to na_te.dros performed on 2019-03-17 00:25:05 has no hits.

FI21646.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-17 00:26:06 Download gff for FI21646.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 1775193..1776579 1..1390 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-09-19 13:07:08 Download gff for FI21646.complete
Subject Subject Range Query Range Percent Splice Strand
CG12018-RA 1..1296 52..1347 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:28:05 Download gff for FI21646.complete
Subject Subject Range Query Range Percent Splice Strand
CG12018-RA 1..1296 52..1347 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-19 13:07:08 Download gff for FI21646.complete
Subject Subject Range Query Range Percent Splice Strand
CG12018-RA 1..1387 1..1390 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:28:05 Download gff for FI21646.complete
Subject Subject Range Query Range Percent Splice Strand
CG12018-RA 1..1387 1..1390 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 00:26:06 Download gff for FI21646.complete
Subject Subject Range Query Range Percent Splice Strand
3L 1775633..1777019 1..1390 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 00:26:06 Download gff for FI21646.complete
Subject Subject Range Query Range Percent Splice Strand
3L 1775633..1777019 1..1390 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 00:26:06 Download gff for FI21646.complete
Subject Subject Range Query Range Percent Splice Strand
3L 1775633..1777019 1..1390 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-19 13:07:08 Download gff for FI21646.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 1775633..1777019 1..1390 99   Plus

FI21646.pep Sequence

Translation from 51 to 1346

> FI21646.pep
MTNRLETKYENLSSIFRLKGHDYQKQFFHLYAHRLAEMTRLLTPLAQKKW
GNKEPIKKLCELRGEQDVHCILIGTIFKHQAHKPSILRDISEENQLAPQP
PRQNYSDPEDKIVLEDELQRVRLQGKLNGQLLATGVVCAALGGTDSDGFF
NVEDILFYESGPQKPLAPIKRSRLLVLASGLDQLQAHKFVEALNLFQYWL
AGSLGNNKEAGSMVRLIVAGNSVRASAMAHVPTLQVARTQANANDTVQAV
SQLDQWFASWARSLPVDIMPGPYDPANFMLPQQPFHKCMFPQAAQLATFQ
AVTNPYSCRLDEALVVGTSGQNVSDLLRSTSLDSALEALRCTLTWGHVAP
TAPDTLACYPYIESDPFILRECPHVYYAGNCESFATELHEGSEGKRTRLV
CVPSFSKTQSVAVVDLDTLDCRMVNFSVDAE*

FI21646.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 01:00:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF24834-PA 432 GF24834-PA 1..432 1..431 2022 85 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 01:00:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG14822-PA 431 GG14822-PA 1..431 1..431 2254 96.1 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 01:00:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH15719-PA 435 GH15719-PA 1..435 1..431 1645 72.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:13:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG12018-PA 431 CG12018-PA 1..431 1..431 2259 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 01:00:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI12543-PA 432 GI12543-PA 1..432 1..431 1830 76.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 01:00:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL16053-PA 431 GL16053-PA 1..431 1..431 1967 81.7 Plus
Dper\GL20742-PA 227 GL20742-PA 2..225 127..412 876 60.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 01:00:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA11341-PA 431 GA11341-PA 1..431 1..431 1963 81.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 01:00:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM14443-PA 418 GM14443-PA 1..418 1..431 2185 94.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 01:00:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD13645-PA 431 GD13645-PA 1..431 1..431 2289 98.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 01:00:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ16059-PA 432 GJ16059-PA 1..432 1..431 1816 75.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 01:00:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK16535-PA 434 GK16535-PA 5..434 4..431 1880 77.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 01:00:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE21185-PA 431 GE21185-PA 1..431 1..431 2214 94 Plus

FI21646.hyp Sequence

Translation from 51 to 1346

> FI21646.hyp
MTNRLETKYENLSSIFRLKGHDYQKQFFHLYAHRLAEMTRLLTPLAQKKW
GNKEPIKKLCELRGEQDVHCILIGTIFKHQAHKPSILRDISEENQLAPQP
PRQNYSDPEDKIVLEDELQRVRLQGKLNGQLLATGVVCAALGGTDSDGFF
NVEDILFYESGPQKPLAPIKRSRLLVLASGLDQLQAHKFVEALNLFQYWL
AGSLGNNKEAGSMVRLIVAGNSVRASAMAHVPTLQVARTQANANDTVQAV
SQLDQWFASWARSLPVDIMPGPYDPANFMLPQQPFHKCMFPQAAQLATFQ
AVTNPYSCRLDEALVVGTSGQNVSDLLRSTSLDSALEALRCTLTWGHVAP
TAPDTLACYPYIESDPFILRECPHVYYAGNCESFATELHEGSEGKRTRLV
CVPSFSKTQSVAVVDLDTLDCRMVNFSVDAE*

FI21646.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:05:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG12018-PA 431 CG12018-PA 1..431 1..431 2259 100 Plus