Clone FI21744 Report

Search the DGRC for FI21744

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:217
Well:44
Vector:pOT2|pOTB7_DraIII
Associated Gene/TranscriptSas-6-RA
Protein status:FI21744.pep: gold
Sequenced Size:1528

Clone Sequence Records

FI21744.complete Sequence

1528 bp assembled on 2013-06-26

GenBank Submission: BT150139.1

> FI21744.complete
CTGATCTGTCATGTGGCCTCCAGGGAGCGAGGATAGCTACTCCGCCAAAA
TGGACTACGGCAAGAGCGTGGTGAACATCCTGCCCAGCGTAGAGATGCTG
GTGAACTTTAATGGCGAAATGACGCGGTCTAGCAAACGGTCATGTCTACT
GTACGCGGAGAGAGTGGACTTCAAGGAGCTGCTGCAACTCCGATTAACGG
AGAAGTCCGATCAACGGCGCATGTACATCACCACAGTGGACAGCGCCTCC
TTTCAGGATCTCAAACAGGATCAGTCGCTGAATGTGTCATTCTCTGGGTT
CATTGACAATGTAGTGCGCATGCTGAAGGACTGCCAGTCGGGTAAACTGG
AGCTGCACCTGACCACACGGGATCAGAACCTTTCATCCGGCAGGGAGGTC
CACGACTATTATCTTCAGTTTGTTGAAATTCGGTCCTTTAAGAACCTGGT
TCACCTTAGCCTGCCTTGTCGTTCTGCTCCCTTGAACACCGTACTCTTCT
ACATAAACAGCATGCTGGAAGCCTCCCACAAAAAGCAATATATTCTCGAG
CAAAGTATGCAGCAAATGCAGGCTGAAATCAACGCACAACGCGCGCATGC
GGAAAGGTTGACCACGGAAAACACAAATATCAGGGAAGCTTTGGCCGAAA
ATACTCGCATCTTAGAGGAAAAGCATGCTGCCGAGGTCCATCAATACCAG
GAAAAACTGTCCAAAATAAACGAGCAGCGCAGCAATGAGCTGGAGAGAAA
TCGTAGAGCGATCTCCGGCTTTCAGGCCCAATTGGACAAGGCTTCGTTGG
AGAAAGCAGAACTAAAGTCGGCCCAAGAGCAGGCCGAGAAACGATGTCAA
ACCCTGTCCGAGGAGTTGTCCTGTTGCAAAGCCAGAGTGTGCACTCTAAA
AGAGCAAAATGACAAACTGCACGGGGATGTGGCCAACATCAGGAAGCATG
AACGCAAGTTGGAGTACAAAATCGAGGACCTCAAGCAGCACACTGTCGAG
CTGCAGGAACATATTCAAAAGGGAAACAAAGAGAAGGCCAACATAGCCGC
TGAACTGGAGGCCGAGAAGAAGATCCTGCACACCAAGCGCCAGGCTTTGG
AAATGGCCTCCGAGGAGATCTCCAAGGCCAACCAGATAATCGTTAAACAA
AGCCAGGAGCTGCTCAACCTCAAAAAGACCATTGCCTGGCGCACAGAGGT
GGCTCTGCAGCAAGAAAAGGCGGTTCAGGCCAAGGAGAGCCTACTATCCC
TGAGGGAGAATGAGCTGCGCGAGGCTCGAATAACTATTGAAAAACTGAGG
GAGGAAATCCCCCAGCAACTGCAATCCATGCGTAACTTTGCCCAGGGACT
GGAGCAGAAGTATTCCAAACAAATCCTCATTCTAAAAGAACGGCTTGCAA
TACCCACGGGCAAAGAAAACCGGCGATAGTTTTACTTATTGTTAGTGCAT
TTTTTCGTTTTTTGTACCAGTTTAGTAAAGTTAGTTGTATTATTCAGCTC
TAGTCATAAAAAAAAAAAAAAAAAAAAA

FI21744.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 14:32:56
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 25817979..25818832 184..1037 4060 98.4 Plus
chr3R 27901430 chr3R 25818888..25819223 1035..1370 1650 99.4 Plus
chr3R 27901430 chr3R 25817737..25817920 1..184 905 99.5 Plus
chr3R 27901430 chr3R 25819278..25819414 1371..1507 670 99.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 14:32:54
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 29995599..29996452 184..1037 4210 99.5 Plus
3R 32079331 3R 29996508..29996843 1035..1370 1650 99.4 Plus
3R 32079331 3R 29995357..29995540 1..184 890 98.9 Plus
3R 32079331 3R 29996898..29997036 1371..1509 665 98.6 Plus
Blast to na_te.dros performed on 2019-03-15 14:32:55 has no hits.

FI21744.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 14:34:12 Download gff for FI21744.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 25817737..25817920 1..184 99 -> Plus
chr3R 25817980..25818831 185..1036 98 -> Plus
chr3R 25818890..25819223 1037..1370 99 -> Plus
chr3R 25819278..25819414 1371..1507 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2013-06-26 12:40:23 Download gff for FI21744.complete
Subject Subject Range Query Range Percent Splice Strand
sas-6-RA 1..1419 11..1429 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 00:33:53 Download gff for FI21744.complete
Subject Subject Range Query Range Percent Splice Strand
Sas-6-RA 1..1419 11..1429 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:02:09 Download gff for FI21744.complete
Subject Subject Range Query Range Percent Splice Strand
Sas-6-RA 1..1419 11..1429 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-06-26 12:40:23 Download gff for FI21744.complete
Subject Subject Range Query Range Percent Splice Strand
sas-6-RA 1..1507 1..1507 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:33:53 Download gff for FI21744.complete
Subject Subject Range Query Range Percent Splice Strand
Sas-6-RA 1..1507 1..1507 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:02:09 Download gff for FI21744.complete
Subject Subject Range Query Range Percent Splice Strand
Sas-6-RA 1..1507 1..1507 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:34:12 Download gff for FI21744.complete
Subject Subject Range Query Range Percent Splice Strand
3R 29995357..29995540 1..184 98 -> Plus
3R 29995600..29996451 185..1036 99 -> Plus
3R 29996510..29996843 1037..1370 99 -> Plus
3R 29996898..29997034 1371..1507 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:34:12 Download gff for FI21744.complete
Subject Subject Range Query Range Percent Splice Strand
3R 29995357..29995540 1..184 98 -> Plus
3R 29995600..29996451 185..1036 99 -> Plus
3R 29996510..29996843 1037..1370 99 -> Plus
3R 29996898..29997034 1371..1507 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:34:12 Download gff for FI21744.complete
Subject Subject Range Query Range Percent Splice Strand
3R 29995357..29995540 1..184 98 -> Plus
3R 29995600..29996451 185..1036 99 -> Plus
3R 29996510..29996843 1037..1370 99 -> Plus
3R 29996898..29997034 1371..1507 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:33:53 Download gff for FI21744.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 25822620..25822756 1371..1507 98   Plus
arm_3R 25822232..25822565 1037..1370 99 -> Plus
arm_3R 25821079..25821262 1..184 98 -> Plus
arm_3R 25821322..25822173 185..1036 99 -> Plus

FI21744.hyp Sequence

Translation from 10 to 1428

> FI21744.hyp
MWPPGSEDSYSAKMDYGKSVVNILPSVEMLVNFNGEMTRSSKRSCLLYAE
RVDFKELLQLRLTEKSDQRRMYITTVDSASFQDLKQDQSLNVSFSGFIDN
VVRMLKDCQSGKLELHLTTRDQNLSSGREVHDYYLQFVEIRSFKNLVHLS
LPCRSAPLNTVLFYINSMLEASHKKQYILEQSMQQMQAEINAQRAHAERL
TTENTNIREALAENTRILEEKHAAEVHQYQEKLSKINEQRSNELERNRRA
ISGFQAQLDKASLEKAELKSAQEQAEKRCQTLSEELSCCKARVCTLKEQN
DKLHGDVANIRKHERKLEYKIEDLKQHTVELQEHIQKGNKEKANIAAELE
AEKKILHTKRQALEMASEEISKANQIIVKQSQELLNLKKTIAWRTEVALQ
QEKAVQAKESLLSLRENELREARITIEKLREEIPQQLQSMRNFAQGLEQK
YSKQILILKERLAIPTGKENRR*

FI21744.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:56:11
Subject Length Description Subject Range Query Range Score Percent Strand
Sas-6-PA 472 CG15524-PA 1..472 1..472 2360 100 Plus
mud-PG 1933 CG12047-PG 1365..1681 162..455 168 19.4 Plus
mud-PI 2113 CG12047-PI 1365..1681 162..455 168 19.4 Plus
mud-PJ 2165 CG12047-PJ 1365..1681 162..455 168 19.4 Plus
mud-PF 2394 CG12047-PF 1365..1681 162..455 168 19.4 Plus
mud-PG 1933 CG12047-PG 1237..1507 181..454 165 22.3 Plus
mud-PI 2113 CG12047-PI 1237..1507 181..454 165 22.3 Plus
mud-PJ 2165 CG12047-PJ 1237..1507 181..454 165 22.3 Plus

FI21744.pep Sequence

Translation from 10 to 1428

> FI21744.pep
MWPPGSEDSYSAKMDYGKSVVNILPSVEMLVNFNGEMTRSSKRSCLLYAE
RVDFKELLQLRLTEKSDQRRMYITTVDSASFQDLKQDQSLNVSFSGFIDN
VVRMLKDCQSGKLELHLTTRDQNLSSGREVHDYYLQFVEIRSFKNLVHLS
LPCRSAPLNTVLFYINSMLEASHKKQYILEQSMQQMQAEINAQRAHAERL
TTENTNIREALAENTRILEEKHAAEVHQYQEKLSKINEQRSNELERNRRA
ISGFQAQLDKASLEKAELKSAQEQAEKRCQTLSEELSCCKARVCTLKEQN
DKLHGDVANIRKHERKLEYKIEDLKQHTVELQEHIQKGNKEKANIAAELE
AEKKILHTKRQALEMASEEISKANQIIVKQSQELLNLKKTIAWRTEVALQ
QEKAVQAKESLLSLRENELREARITIEKLREEIPQQLQSMRNFAQGLEQK
YSKQILILKERLAIPTGKENRR*

FI21744.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 12:22:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF18812-PA 474 GF18812-PA 1..474 1..472 2006 80 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 12:22:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG11715-PA 472 GG11715-PA 1..472 1..472 2269 91.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 12:22:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH18530-PA 476 GH18530-PA 1..468 1..470 1683 67.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:27:00
Subject Length Description Subject Range Query Range Score Percent Strand
Sas-6-PA 472 CG15524-PA 1..472 1..472 2360 100 Plus
mud-PG 1933 CG12047-PG 1365..1681 162..455 168 19.4 Plus
mud-PI 2113 CG12047-PI 1365..1681 162..455 168 19.4 Plus
mud-PJ 2165 CG12047-PJ 1365..1681 162..455 168 19.4 Plus
mud-PF 2394 CG12047-PF 1365..1681 162..455 168 19.4 Plus
mud-PH 2567 CG12047-PH 1365..1681 162..455 168 19.4 Plus
Mtor-PB 2346 CG8274-PB 48..335 166..455 167 20.1 Plus
Mtor-PA 2346 CG8274-PA 48..335 166..455 167 20.1 Plus
mud-PG 1933 CG12047-PG 1237..1507 181..454 165 22.3 Plus
mud-PI 2113 CG12047-PI 1237..1507 181..454 165 22.3 Plus
mud-PJ 2165 CG12047-PJ 1237..1507 181..454 165 22.3 Plus
mud-PF 2394 CG12047-PF 1237..1507 181..454 165 22.3 Plus
mud-PH 2567 CG12047-PH 1237..1507 181..454 165 22.3 Plus
mud-PK 1912 CG12047-PK 1363..1661 181..455 161 20.5 Plus
mud-PL 2501 CG12047-PL 1321..1619 181..455 160 20.5 Plus
Gmap-PC 1208 CG33206-PC 582..870 179..453 159 24.5 Plus
Gmap-PB 1208 CG33206-PB 582..870 179..453 159 24.5 Plus
Gmap-PA 1398 CG33206-PA 772..1060 179..453 159 24.5 Plus
CLIP-190-PN 1598 CG5020-PN 960..1343 93..460 159 22.7 Plus
CLIP-190-PR 1601 CG5020-PR 963..1346 93..460 159 22.7 Plus
CLIP-190-PP 1623 CG5020-PP 985..1368 93..460 159 22.7 Plus
CLIP-190-PC 1652 CG5020-PC 1014..1397 93..460 159 22.7 Plus
CLIP-190-PS 1653 CG5020-PS 1015..1398 93..460 159 22.7 Plus
CLIP-190-PM 1668 CG5020-PM 1030..1413 93..460 159 22.7 Plus
CLIP-190-PB 1689 CG5020-PB 1051..1434 93..460 159 22.7 Plus
CLIP-190-PA 1690 CG5020-PA 1052..1435 93..460 159 22.7 Plus
mud-PK 1912 CG12047-PK 1237..1513 181..460 158 22.4 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 12:22:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI10799-PA 475 GI10799-PA 1..467 1..470 1713 69.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 12:22:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL14013-PA 465 GL14013-PA 1..465 1..472 1755 71.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 12:22:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA13782-PA 465 GA13782-PA 1..465 1..472 1749 71.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 12:22:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM12845-PA 320 GM12845-PA 104..320 256..472 1048 96.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 12:22:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD14058-PA 222 GD14058-PA 1..220 183..402 1049 93.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 12:22:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ14397-PA 481 GJ14397-PA 1..473 1..470 1759 69.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 12:22:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK13203-PA 469 GK13203-PA 1..469 1..472 1798 71.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 12:22:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE23907-PA 472 GE23907-PA 1..472 1..472 2287 90.3 Plus