Clone FI21758 Report

Search the DGRC for FI21758

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:217
Well:58
Vector:pOT2|pOTB7_DraIII
Associated Gene/TranscriptSemp1-RA
Protein status:FI21758.pep: gold
Sequenced Size:808

Clone Sequence Records

FI21758.complete Sequence

808 bp assembled on 2013-06-26

GenBank Submission: BT150134.1

> FI21758.complete
GTCTCCACCATGTTTCCGCAGATATGGGGTGTGATTTTTTTGTTCACTCC
TACTGTTTTTAGTGAACTCTTTAAGGATCCGGAGCTGCTTGCCGGATTTT
ATCAGGGGGACATAAAAGCTCATCCAATTCGTACTCGAAACGGAATTGTC
AATCAGATTTATCACTGGCCCAATCGCACTGTACCATATATGATTGAAGA
TGATGCATTTGCCGACAGTCATTATCGGGAAATTCTTAGAGCCATTTCCA
TCATAGAGGAAAACTCATGCGTTATTTTCAAGCCAGCTACTGAAATGGAT
TTTCCCATGGCGCTCGTCATTACGTCAAAAGGTTTGGGCTGCAATACCGT
TCACTTGGGCTATAGGAATAAGACACAAGTGGTAAATCTGGAGATTTACC
CACTTGGCGAAGGCTGCTTTCGCATCGGTTCCATTATCCACGAGCTCCTT
CACGTTTTGGGCTTCGAACATCAGCATGTGTCCCAAAATCGGGACCAATA
CGTCAGCATCCAGTGGAAAAATATAAATCCGCAGTACAATATCAATTTCG
TGAACAACGATAATTCTACAGCGTGGCACGACTTTGACGAAGGCTACGAT
TATGAAAGTGTTATGCACTATGTGCCAAGGGCCTTTTCCAGGAATGGCCA
ACCCACAATTGTGCCCCTCCGCGAAGGAGCCGAAAATATGGGGCAACGAT
TTTATATGAGCGAAAAGGATATTCGCAAGTTGAACAAAATGTATAGATGC
CCTGATCATGTTTAGGCAAAATATATTTGAATTAGTCATAAAAAAAAAAA
AAAAAAAA

FI21758.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 14:32:49
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 15611205..15611783 789..211 2880 99.8 Minus
chr2L 23010047 chr2L 15611836..15612046 211..1 1040 99.5 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 14:32:47
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 15612490..15613072 793..211 2900 99.8 Minus
2L 23513712 2L 15613125..15613335 211..1 1055 100 Minus
Blast to na_te.dros performed on 2019-03-15 14:32:47 has no hits.

FI21758.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 14:34:08 Download gff for FI21758.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 15611205..15611782 212..789 99 <- Minus
chr2L 15611836..15612046 1..211 99   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2013-06-26 12:40:19 Download gff for FI21758.complete
Subject Subject Range Query Range Percent Splice Strand
CG11864-RA 1..756 10..765 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 00:33:45 Download gff for FI21758.complete
Subject Subject Range Query Range Percent Splice Strand
CG11864-RA 1..756 10..765 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:01:59 Download gff for FI21758.complete
Subject Subject Range Query Range Percent Splice Strand
Semp1-RA 1..756 10..765 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-06-26 12:40:19 Download gff for FI21758.complete
Subject Subject Range Query Range Percent Splice Strand
CG11864-RA 1..789 1..789 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:33:45 Download gff for FI21758.complete
Subject Subject Range Query Range Percent Splice Strand
CG11864-RA 1..789 1..789 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:01:59 Download gff for FI21758.complete
Subject Subject Range Query Range Percent Splice Strand
Semp1-RA 1..789 1..789 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:34:08 Download gff for FI21758.complete
Subject Subject Range Query Range Percent Splice Strand
2L 15612494..15613071 212..789 99 <- Minus
2L 15613125..15613335 1..211 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:34:08 Download gff for FI21758.complete
Subject Subject Range Query Range Percent Splice Strand
2L 15612494..15613071 212..789 99 <- Minus
2L 15613125..15613335 1..211 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:34:08 Download gff for FI21758.complete
Subject Subject Range Query Range Percent Splice Strand
2L 15612494..15613071 212..789 99 <- Minus
2L 15613125..15613335 1..211 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:33:45 Download gff for FI21758.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 15612494..15613071 212..789 99 <- Minus
arm_2L 15613125..15613335 1..211 100   Minus

FI21758.hyp Sequence

Translation from 0 to 764

> FI21758.hyp
VSTMFPQIWGVIFLFTPTVFSELFKDPELLAGFYQGDIKAHPIRTRNGIV
NQIYHWPNRTVPYMIEDDAFADSHYREILRAISIIEENSCVIFKPATEMD
FPMALVITSKGLGCNTVHLGYRNKTQVVNLEIYPLGEGCFRIGSIIHELL
HVLGFEHQHVSQNRDQYVSIQWKNINPQYNINFVNNDNSTAWHDFDEGYD
YESVMHYVPRAFSRNGQPTIVPLREGAENMGQRFYMSEKDIRKLNKMYRC
PDHV*

FI21758.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:56:03
Subject Length Description Subject Range Query Range Score Percent Strand
Semp1-PA 251 CG11864-PA 1..251 4..254 1367 100 Plus
CG15254-PB 254 CG15254-PB 10..254 11..254 551 48.4 Plus
CG15254-PA 254 CG15254-PA 10..254 11..254 551 48.4 Plus
CG15255-PB 261 CG15255-PB 28..258 26..251 468 43.6 Plus
CG15255-PA 261 CG15255-PA 28..258 26..251 468 43.6 Plus

FI21758.pep Sequence

Translation from 0 to 764

> FI21758.pep
VSTMFPQIWGVIFLFTPTVFSELFKDPELLAGFYQGDIKAHPIRTRNGIV
NQIYHWPNRTVPYMIEDDAFADSHYREILRAISIIEENSCVIFKPATEMD
FPMALVITSKGLGCNTVHLGYRNKTQVVNLEIYPLGEGCFRIGSIIHELL
HVLGFEHQHVSQNRDQYVSIQWKNINPQYNINFVNNDNSTAWHDFDEGYD
YESVMHYVPRAFSRNGQPTIVPLREGAENMGQRFYMSEKDIRKLNKMYRC
PDHV*

FI21758.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 12:22:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF13898-PA 251 GF13898-PA 21..251 24..254 726 56.3 Plus
Dana\GF13897-PA 254 GF13897-PA 18..254 14..254 550 48.8 Plus
Dana\GF13899-PA 260 GF13899-PA 28..257 26..251 510 46 Plus
Dana\GF13868-PA 255 GF13868-PA 32..252 26..251 482 46.3 Plus
Dana\GF22400-PA 360 GF22400-PA 115..324 31..248 368 39.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 12:22:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG24204-PA 250 GG24204-PA 1..250 4..254 1105 80.5 Plus
Dere\GG24203-PA 254 GG24203-PA 30..254 26..254 543 50 Plus
Dere\GG25167-PA 254 GG25167-PA 31..251 26..251 485 45.8 Plus
Dere\GG24205-PA 261 GG24205-PA 28..258 26..251 477 43.9 Plus
Dere\GG24202-PA 253 GG24202-PA 20..249 16..251 460 45 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 12:22:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH13110-PA 252 GH13110-PA 18..252 14..254 552 50.4 Plus
Dgri\GH13112-PA 262 GH13112-PA 28..259 24..251 485 45 Plus
Dgri\GH13765-PA 256 GH13765-PA 24..256 17..254 477 43.1 Plus
Dgri\GH13111-PA 252 GH13111-PA 18..252 14..254 476 44.6 Plus
Dgri\GH12202-PA 314 GH12202-PA 70..280 31..249 381 42 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:54:04
Subject Length Description Subject Range Query Range Score Percent Strand
Semp1-PA 251 CG11864-PA 1..251 4..254 1367 100 Plus
CG15254-PB 254 CG15254-PB 10..254 11..254 551 48.4 Plus
CG15254-PA 254 CG15254-PA 10..254 11..254 551 48.4 Plus
CG15255-PB 261 CG15255-PB 28..258 26..251 468 43.6 Plus
CG15255-PA 261 CG15255-PA 28..258 26..251 468 43.6 Plus
CG7631-PA 254 CG7631-PA 31..251 26..251 455 44.1 Plus
CG15253-PA 253 CG15253-PA 28..249 26..251 451 45.4 Plus
CG6696-PA 324 CG6696-PA 81..289 32..248 364 40.1 Plus
CG5715-PA 295 CG5715-PA 68..293 26..250 334 39 Plus
CG6763-PB 354 CG6763-PB 85..302 26..250 313 37.4 Plus
CG6763-PA 354 CG6763-PA 85..302 26..250 313 37.4 Plus
CG11865-PA 240 CG11865-PA 38..239 33..248 304 36.4 Plus
CG10280-PA 356 CG10280-PA 107..338 26..250 281 36.1 Plus
CG10280-PB 362 CG10280-PB 113..344 26..250 281 36.1 Plus
tok-PC 1464 CG6863-PC 529..721 56..251 235 30.2 Plus
tok-PA 1464 CG6863-PA 529..721 56..251 235 30.2 Plus
tok-PB 1464 CG6863-PB 529..721 56..251 235 30.2 Plus
CG6974-PA 251 CG6974-PA 45..251 44..250 223 31.8 Plus
tld-PA 1067 CG6868-PA 116..337 28..250 183 27.8 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 12:22:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI22585-PA 254 GI22585-PA 4..254 5..254 565 48.8 Plus
Dmoj\GI22607-PA 249 GI22607-PA 21..241 26..251 542 52 Plus
Dmoj\GI22596-PA 264 GI22596-PA 40..264 26..254 516 47.8 Plus
Dmoj\GI22574-PA 262 GI22574-PA 17..258 5..250 483 43.3 Plus
Dmoj\GI22618-PA 263 GI22618-PA 27..260 22..251 474 43.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 12:22:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL26588-PA 281 GL26588-PA 27..255 26..251 618 53 Plus
Dper\GL26587-PA 253 GL26587-PA 29..253 26..254 527 49.6 Plus
Dper\GL26591-PA 262 GL26591-PA 30..259 26..251 504 47.2 Plus
Dper\GL26434-PA 250 GL26434-PA 26..247 25..251 469 45.6 Plus
Dper\GL26586-PA 250 GL26586-PA 25..249 23..251 462 45 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 12:22:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA11244-PA 281 GA11244-PA 27..255 26..251 618 53 Plus
Dpse\GA13604-PA 253 GA13604-PA 17..253 14..254 530 47.5 Plus
Dpse\GA13605-PA 262 GA13605-PA 21..259 17..251 509 45.9 Plus
Dpse\GA20493-PA 250 GA20493-PA 26..247 25..251 464 44.7 Plus
Dpse\GA13603-PA 250 GA13603-PA 25..249 23..251 462 45 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 12:22:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM14297-PA 251 GM14297-PA 1..250 4..253 1268 91.6 Plus
Dsec\GM14287-PA 254 GM14287-PA 21..254 17..254 541 47.9 Plus
Dsec\GM14306-PA 261 GM14306-PA 28..258 26..251 478 43.6 Plus
Dsec\GM16106-PA 254 GM16106-PA 31..251 26..251 456 43.6 Plus
Dsec\GM22792-PA 324 GM22792-PA 80..289 31..248 369 39.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 12:22:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD21950-PA 251 GD21950-PA 1..250 4..253 1272 92 Plus
Dsim\GD21949-PA 254 GD21949-PA 21..254 17..254 555 49 Plus
Dsim\GD21951-PA 261 GD21951-PA 28..258 26..251 477 43.6 Plus
Dsim\GD21948-PA 253 GD21948-PA 20..249 16..251 470 45.4 Plus
Dsim\GD24016-PA 254 GD24016-PA 31..251 26..251 463 44.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 12:22:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ23159-PA 265 GJ23159-PA 29..265 12..254 560 50.2 Plus
Dvir\GJ23181-PA 263 GJ23181-PA 31..260 26..251 509 45.5 Plus
Dvir\GJ23170-PA 252 GJ23170-PA 6..252 8..254 501 45.3 Plus
Dvir\GJ23077-PA 255 GJ23077-PA 32..255 26..254 428 41.7 Plus
Dvir\GJ23066-PA 259 GJ23066-PA 26..252 21..251 381 38.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 12:22:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK18246-PA 256 GK18246-PA 31..253 26..251 553 49.6 Plus
Dwil\GK18907-PA 264 GK18907-PA 30..261 26..251 520 46.2 Plus
Dwil\GK18245-PA 251 GK18245-PA 30..251 26..251 494 47.4 Plus
Dwil\GK18143-PA 259 GK18143-PA 33..256 26..251 448 43.9 Plus
Dwil\GK24951-PA 316 GK24951-PA 72..281 31..248 362 39 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 12:22:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE19398-PA 251 GE19398-PA 1..251 4..254 1131 80.9 Plus
Dyak\GE19397-PA 254 GE19397-PA 10..254 11..254 552 47.6 Plus
Dyak\GE19399-PA 261 GE19399-PA 28..258 26..251 483 44.1 Plus
Dyak\BG:BACR44L22.3-PA 252 GE19396-PA 27..248 26..251 470 47.4 Plus
Dyak\GE21078-PA 254 GE21078-PA 4..251 8..251 470 42 Plus