Clone FI21801 Report

Search the DGRC for FI21801

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:218
Well:1
Vector:pFlc-1
Associated Gene/TranscriptCG17658-RA
Protein status:FI21801.pep: gold
Sequenced Size:1880

Clone Sequence Records

FI21801.complete Sequence

1880 bp assembled on 2013-07-18

GenBank Submission: BT150182.1

> FI21801.complete
GCTTTTTTTGACCGGTACGCAGATATCATGCTCAACTTTTAAACAGTTTC
GACTGTTTTGGCACATTAAATGCTCGAATTGAATGAATAAAAGGAAACTT
GGTCAAGGAATCTGAGCATTGCAAAATGATGGCGCCGGTAGATCCACCAG
TGGGATCCTTTCTGAAGTGCTTCGTCTGCGTCTCCGATGAGGGCAGGACT
TGGACAGAATTGATACAAGGTTTCACCAAGGAATCGGACAAGGTGGAAAA
GAACCTTGCTCACCTGCAAACGCTTCTGGAGAAAGCACATGTGAAGCCCA
GCGTGATATGCAGAGGCTGCAATATGCAGCGATACTGCAGCCTGTCCCAT
CTCGTGGCGGATCGTCAAGAACACAAGCCACTCTGCGAGGTGCTGAGGGA
TCTGCAGAAGTCCATGAAGATCGATCACCCGTTGAAGCTGCTCGGCCAAA
TCACCGATCGCAGGAAGCTTCAGCTCGTCATTTCGCAGCTAAAGATGGTC
CTGCTGGCCAAGTTGGGCAGACCACTGAATCAGCGGGAGCATCAGCTAAT
CGGCAACCCAGCCGTGTGCGATGTGTGCTTCAGCACTGAAGCTCTCGAGG
ACTGTGAAGGATGTGCCGGAGTGGCCTTCTGCTCCGCGGCACACCAACGC
CTAGTCAGGGGCTATCACACCCCGGAGGATTGCCAGACCCTGGCTCTGAT
TGCCACTCCGTTTCGTCAGTTGAACTGTCTAGTGAATATCAAGGACTTCT
ACCGCAGTTGCCCACTAAAAGAGTCTAATCTAATCAAGGCTTTCACCGAA
GCCACCGACATACGGATCAGCGACACTCCTTGGACCGATCTGGAATCGTA
CCAGCTATTCGCTACCTGTTCCTCCTTCAGCGGCATCGCAAGTCTGTGCC
TGGCCCTGTCGCACATTTCCTGGGTCCCAGATCCGAATAAAGCTGTCATA
GTCTACGTGGCCGGCGCCACCGAGGACACTTTGCGCTACTTCGAGGACAT
GCACCTGCGTTTTCTGTTCCTGCAGTACCCAAGCATTCGTAATCTGGAAT
TACACTTCATTGGAAGAACCGTTGGGCGCATCGACCAAGTGGATATCAAA
TTCAGCGACAGGAGCTTTGAACAAACCGTGGTGAAATGCTTTTACCCCCT
GTCATTTTCACAATATTCCTGTATTCTAAATGTGGATCCCACCTTGATTC
TCATCATGCAACCCGATTTCTTCGGAGTCGGTAAAGTAACCCAGAGAATT
TCTAGGTATATGAAAAGGAAGGTTCCACTCGAAAACGAATGGAAGCCTTG
CTTGTCAAGTGTTATTCGATCTTTTGGTGTTCCCATTTGCTACACTTCGA
TTTCAAGGGCTCAGGCAATTTCCGATTTCGCGGCCATCACATTGTCCGCT
GAGAAGAGCAAGATTGCCATCGAGAGAGCCTACAATATAATGGGCAATCC
CTATCGTGAAATATTGCCACTGCACAATCCAGCACCAGAAGATACCGAGA
GGATTGTGTATGCCAATAACTACCTCGAGGTTATTTTCACAAGCAAAAAA
AAATGCCAATGACTACCAAAGACTATATAAGGCTTAGTTTAGTACACATA
ATACCTTCGACAATACTGACATTTGTTATTAAACAGCTGCTCGTCAAATA
CATATTCTAAGTTACCTGATTACTGCCACAAGTATCAAGTTAGATGCATT
AAAACTACCCAAGACTGTAGAATAACTACAATTAGTTGATAATATCGAGA
ACAGTATTCAGTTTCGAACGCGGCTTTGAATGTCGCCCTTTAATTTAAAC
ATGTTTGTTTATCCATTTACATTTTTGGTAATTCTTTAAGAATAAATTGT
TTAACTAGTTAAAGAAAAAAAAAAAAAAAA

FI21801.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 11:21:36
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 19781283..19783037 106..1860 8640 99.5 Plus
chr2R 21145070 chr2R 19781120..19781227 1..108 540 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 11:21:35
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 23895243..23896997 106..1860 8775 100 Plus
2R 25286936 2R 23895078..23895185 1..108 540 100 Plus
Blast to na_te.dros performed 2019-03-15 11:21:35
Subject Length Description Subject Range Query Range Score Percent Strand
Quasimodo 7387 Quasimodo QUASIMODO 7387bp Derived from P1 clones DS08479 & DS07153 by Sue Celniker, 29 March 2001. 3148..3250 1038..1139 115 60.6 Plus

FI21801.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 11:22:29 Download gff for FI21801.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 19781120..19781226 1..107 100 -> Plus
chr2R 19781285..19783042 108..1864 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2013-07-18 10:14:25 Download gff for FI21801.complete
Subject Subject Range Query Range Percent Splice Strand
CG17658-RA 1..1437 126..1562 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:27:18 Download gff for FI21801.complete
Subject Subject Range Query Range Percent Splice Strand
CG17658-RA 1..1437 126..1562 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:30:44 Download gff for FI21801.complete
Subject Subject Range Query Range Percent Splice Strand
CG17658-RA 1..1437 126..1562 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-07-18 10:14:25 Download gff for FI21801.complete
Subject Subject Range Query Range Percent Splice Strand
CG17658-RA 1..1860 1..1860 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:27:18 Download gff for FI21801.complete
Subject Subject Range Query Range Percent Splice Strand
CG17658-RA 16..1875 1..1860 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:30:44 Download gff for FI21801.complete
Subject Subject Range Query Range Percent Splice Strand
CG17658-RA 16..1875 1..1860 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:22:29 Download gff for FI21801.complete
Subject Subject Range Query Range Percent Splice Strand
2R 23895078..23895184 1..107 100 -> Plus
2R 23895245..23897002 108..1864 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:22:29 Download gff for FI21801.complete
Subject Subject Range Query Range Percent Splice Strand
2R 23895078..23895184 1..107 100 -> Plus
2R 23895245..23897002 108..1864 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:22:29 Download gff for FI21801.complete
Subject Subject Range Query Range Percent Splice Strand
2R 23895078..23895184 1..107 100 -> Plus
2R 23895245..23897002 108..1864 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:27:18 Download gff for FI21801.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 19782601..19782707 1..107 100 -> Plus
arm_2R 19782768..19784525 108..1864 99   Plus

FI21801.pep Sequence

Translation from 125 to 1561

> FI21801.pep
MMAPVDPPVGSFLKCFVCVSDEGRTWTELIQGFTKESDKVEKNLAHLQTL
LEKAHVKPSVICRGCNMQRYCSLSHLVADRQEHKPLCEVLRDLQKSMKID
HPLKLLGQITDRRKLQLVISQLKMVLLAKLGRPLNQREHQLIGNPAVCDV
CFSTEALEDCEGCAGVAFCSAAHQRLVRGYHTPEDCQTLALIATPFRQLN
CLVNIKDFYRSCPLKESNLIKAFTEATDIRISDTPWTDLESYQLFATCSS
FSGIASLCLALSHISWVPDPNKAVIVYVAGATEDTLRYFEDMHLRFLFLQ
YPSIRNLELHFIGRTVGRIDQVDIKFSDRSFEQTVVKCFYPLSFSQYSCI
LNVDPTLILIMQPDFFGVGKVTQRISRYMKRKVPLENEWKPCLSSVIRSF
GVPICYTSISRAQAISDFAAITLSAEKSKIAIERAYNIMGNPYREILPLH
NPAPEDTERIVYANNYLEVIFTSKKKCQ*

FI21801.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 12:25:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF12872-PA 410 GF12872-PA 1..407 67..473 1098 51.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 12:25:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG22899-PA 476 GG22899-PA 1..475 2..476 2173 82.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:02:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG17658-PA 478 CG17658-PA 1..478 1..478 2513 100 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 12:25:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL11175-PA 474 GL11175-PA 12..474 10..476 997 42.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 12:25:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA14600-PA 476 GA14600-PA 14..476 10..476 995 42.1 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 12:25:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM16060-PA 477 GM16060-PA 1..477 1..477 2399 92.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 12:25:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD11807-PA 477 GD11807-PA 1..477 1..477 2409 92.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 12:25:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ18181-PA 483 GJ18181-PA 60..480 58..473 949 46.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 12:25:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK10282-PA 462 GK10282-PA 7..461 33..475 876 41 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 12:25:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE14337-PA 476 GE14337-PA 1..475 2..476 2167 83.2 Plus

FI21801.hyp Sequence

Translation from 125 to 1561

> FI21801.hyp
MMAPVDPPVGSFLKCFVCVSDEGRTWTELIQGFTKESDKVEKNLAHLQTL
LEKAHVKPSVICRGCNMQRYCSLSHLVADRQEHKPLCEVLRDLQKSMKID
HPLKLLGQITDRRKLQLVISQLKMVLLAKLGRPLNQREHQLIGNPAVCDV
CFSTEALEDCEGCAGVAFCSAAHQRLVRGYHTPEDCQTLALIATPFRQLN
CLVNIKDFYRSCPLKESNLIKAFTEATDIRISDTPWTDLESYQLFATCSS
FSGIASLCLALSHISWVPDPNKAVIVYVAGATEDTLRYFEDMHLRFLFLQ
YPSIRNLELHFIGRTVGRIDQVDIKFSDRSFEQTVVKCFYPLSFSQYSCI
LNVDPTLILIMQPDFFGVGKVTQRISRYMKRKVPLENEWKPCLSSVIRSF
GVPICYTSISRAQAISDFAAITLSAEKSKIAIERAYNIMGNPYREILPLH
NPAPEDTERIVYANNYLEVIFTSKKKCQ*

FI21801.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:59:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG17658-PA 478 CG17658-PA 1..478 1..478 2513 100 Plus