Clone FI21812 Report

Search the DGRC for FI21812

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:218
Well:12
Vector:pFlc-1
Associated Gene/TranscriptCpr97Ea-RA
Protein status:FI21812.pep: gold
Sequenced Size:1530

Clone Sequence Records

FI21812.complete Sequence

1530 bp assembled on 2013-07-17

GenBank Submission: BT150156.1

> FI21812.complete
GCTCAGTTGCCGTCGGTCACAAGTTAATACTCCACGCGATCTCCACCGAA
GTCGGTCCGAAGATTTGGCCGATTTGCCCCAAGATAGTCGCCCGGTTCAT
TAGGGGATTTGGAATTGGAATTGAAATTGAAAGTGCTTTGTTGTCTTCGC
CACTCGATATTCAGCTGGGTGTTGCCAGCGAAGGCCTTTTGCGATTGCAT
TCAGGGTTTAATCGATTCGAAATAGCTGGCCCCACAAAGCCAATCAGCGG
ATACAATTCAACAGTTCAACATGAAAGTGATGCAACGCGTGCTCTTTGTC
GGTTGCCTCATAGTAGGCGTGGGTATGGTGAGATCACAGGACTACCAAGA
CTACCAGGAGAACACACCAAGGACTGCTCCTCTCCGACTGCGAGCTAATG
CCGCTCCTGCTCGAGCTGAAGCGCCGCGGGCTGATCCAGTGGCAATCCTC
AAGCAGATCAACAAGCACAACGAAGATGGCTCTTACACTTATGGCTATGA
GGGAGCTGATGGATCCTTCAAAATCGAGACCAAGCTGGCCACTGGCGAAG
TGAAGGGCAAGTACGGATATGTGGATGAGACCGGAAAAGTTCGAGTAGTT
GAGTACGGAGCCAACAAGTATGGCTTCCAGCCATCTGGAGAAGGTATCAC
CGTGGCACCACCCACACTGGTGGATGAAACTCTCAAGGAGGAACCGGATT
ACGCAGATGAGCCGGCACCACAGCGCCCGCAGAAACCCTATCGTGTTCAA
CGTCCCCAGCCACGCCCTCAGCCTCGCCCACAACCTCAACCCCAGCCACA
GTATGTGCAATACGAGGTGGAAGAGGAGTCACCACGTCGAGTTCAGTATG
CCCCAGCTCCTCAGCCGCAGCCTCAACCACTGCCGCAGCCACAACATCTG
CCACAACAGCACCACCAACCATCGGTGGGTCCGGCACCGCCAAGACTCCA
GGTTCCTGGTGCTCAGCGAACCACCGACGTACTCTACTCACCACTGCAGC
GTCCCGCTCGCCCGGAACCGGATTACTCGCAAACGCAGAGCTTCGGCGAT
GGTCCCTCGAATGTGCGGATTTCCCGACCCGTTTACGCCCTGCCCCCCGC
CTCACCAGCTCCGAGCAGTGCCCGGGCTCAGGGATTCCTGGCTCCCGCCT
CCGGTGGACGTCCGCTGCTGGAACCCGTGGGCTTTGGCCAATCCCAGGGA
CCCAGCGCTCGTCCTGTCCAGCAGCAGCCGAGCTTCCAGCCACAACCGCG
GCCACAGGCTCGTAGTGGTGGAGGCGGTGGCTCCGGATTGCTCGATCAGT
TAGCTCGGGACTACGCCCTGCCCCAGGGAAATGCCCAGCCGCTGCACGAC
ATCACCTTCGGCTACTACTGAGCTGGAGTTTGGCAGGCGGTTGCAGTGCC
CATCATCCTGAATAACCCAGAGATTCCTTGCTTCTAGGTCCTAATCGCAC
AGGTGTACCCTGTCCTCAGATTTTCTAAGCGATATTAAAAATTCCCTGTA
ATAAATTTAACTACAAAAAAAAAAAAAAAA

FI21812.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 11:16:33
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 22906153..22906925 1514..742 3730 98.8 Minus
chr3R 27901430 chr3R 22906989..22907265 741..465 1370 99.6 Minus
chr3R 27901430 chr3R 22909368..22909646 279..1 1350 98.9 Minus
chr3R 27901430 chr3R 22907321..22907507 465..279 905 98.9 Minus
chr3R 27901430 chr3R 22913374..22913552 626..448 235 75.4 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 11:16:31
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 27083128..27083902 1516..742 3875 100 Minus
3R 32079331 3R 27086341..27086619 279..1 1395 100 Minus
3R 32079331 3R 27083966..27084242 741..465 1385 100 Minus
3R 32079331 3R 27084298..27084484 465..279 935 100 Minus
3R 32079331 3R 27090347..27090525 626..448 235 75.4 Minus
Blast to na_te.dros performed on 2019-03-15 11:16:31 has no hits.

FI21812.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 11:17:16 Download gff for FI21812.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 22909368..22909646 1..279 98   Minus
chr3R 22906153..22906925 742..1514 92 <- Minus
chr3R 22906989..22907265 465..741 99 <- Minus
chr3R 22907322..22907506 280..464 98 <- Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2013-07-17 09:23:15 Download gff for FI21812.complete
Subject Subject Range Query Range Percent Splice Strand
Cpr97Ea-RA 1..1101 271..1371 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:26:06 Download gff for FI21812.complete
Subject Subject Range Query Range Percent Splice Strand
Cpr97Ea-RA 1..1101 271..1371 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:28:31 Download gff for FI21812.complete
Subject Subject Range Query Range Percent Splice Strand
Cpr97Ea-RA 1..1101 271..1371 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-07-17 09:23:15 Download gff for FI21812.complete
Subject Subject Range Query Range Percent Splice Strand
Cpr97Ea-RA 1..1512 1..1512 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:26:06 Download gff for FI21812.complete
Subject Subject Range Query Range Percent Splice Strand
Cpr97Ea-RA 1..1514 1..1514 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:28:31 Download gff for FI21812.complete
Subject Subject Range Query Range Percent Splice Strand
Cpr97Ea-RA 1..1514 1..1514 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:17:16 Download gff for FI21812.complete
Subject Subject Range Query Range Percent Splice Strand
3R 27083130..27083902 742..1514 100 <- Minus
3R 27083966..27084242 465..741 100 <- Minus
3R 27084299..27084483 280..464 100 <- Minus
3R 27086341..27086619 1..279 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:17:16 Download gff for FI21812.complete
Subject Subject Range Query Range Percent Splice Strand
3R 27083130..27083902 742..1514 100 <- Minus
3R 27083966..27084242 465..741 100 <- Minus
3R 27084299..27084483 280..464 100 <- Minus
3R 27086341..27086619 1..279 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:17:16 Download gff for FI21812.complete
Subject Subject Range Query Range Percent Splice Strand
3R 27083130..27083902 742..1514 100 <- Minus
3R 27083966..27084242 465..741 100 <- Minus
3R 27084299..27084483 280..464 100 <- Minus
3R 27086341..27086619 1..279 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:26:06 Download gff for FI21812.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 22910021..22910205 280..464 100 <- Minus
arm_3R 22908852..22909624 742..1514 100 <- Minus
arm_3R 22909688..22909964 465..741 100 <- Minus
arm_3R 22912063..22912341 1..279 100   Minus

FI21812.hyp Sequence

Translation from 270 to 1370

> FI21812.hyp
MKVMQRVLFVGCLIVGVGMVRSQDYQDYQENTPRTAPLRLRANAAPARAE
APRADPVAILKQINKHNEDGSYTYGYEGADGSFKIETKLATGEVKGKYGY
VDETGKVRVVEYGANKYGFQPSGEGITVAPPTLVDETLKEEPDYADEPAP
QRPQKPYRVQRPQPRPQPRPQPQPQPQYVQYEVEEESPRRVQYAPAPQPQ
PQPLPQPQHLPQQHHQPSVGPAPPRLQVPGAQRTTDVLYSPLQRPARPEP
DYSQTQSFGDGPSNVRISRPVYALPPASPAPSSARAQGFLAPASGGRPLL
EPVGFGQSQGPSARPVQQQPSFQPQPRPQARSGGGGGSGLLDQLARDYAL
PQGNAQPLHDITFGYY*

FI21812.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:57:54
Subject Length Description Subject Range Query Range Score Percent Strand
Cpr97Ea-PA 366 CG6131-PA 1..366 1..366 1958 100 Plus
Cpr97Ea-PB 363 CG6131-PB 1..363 4..366 1944 100 Plus
Cpr97Eb-PA 235 CG15884-PA 11..214 38..215 352 43.9 Plus
Cpr100A-PA 241 CG12045-PA 5..206 38..233 214 32.1 Plus
CG15021-PA 420 CG15021-PA 139..363 129..326 181 31 Plus

FI21812.pep Sequence

Translation from 270 to 1370

> FI21812.pep
MKVMQRVLFVGCLIVGVGMVRSQDYQDYQENTPRTAPLRLRANAAPARAE
APRADPVAILKQINKHNEDGSYTYGYEGADGSFKIETKLATGEVKGKYGY
VDETGKVRVVEYGANKYGFQPSGEGITVAPPTLVDETLKEEPDYADEPAP
QRPQKPYRVQRPQPRPQPRPQPQPQPQYVQYEVEEESPRRVQYAPAPQPQ
PQPLPQPQHLPQQHHQPSVGPAPPRLQVPGAQRTTDVLYSPLQRPARPEP
DYSQTQSFGDGPSNVRISRPVYALPPASPAPSSARAQGFLAPASGGRPLL
EPVGFGQSQGPSARPVQQQPSFQPQPRPQARSGGGGGSGLLDQLARDYAL
PQGNAQPLHDITFGYY*

FI21812.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 12:23:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF22955-PA 361 GF22955-PA 1..361 1..366 1268 89.1 Plus
Dana\GF22954-PA 237 GF22954-PA 28..107 56..135 298 71.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 12:23:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG12144-PA 366 GG12144-PA 1..366 1..366 1786 97.3 Plus
Dere\GG12142-PA 235 GG12142-PA 28..109 56..137 306 70.7 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 12:23:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH18953-PA 358 GH18953-PA 1..358 1..366 1132 71.4 Plus
Dgri\GH18952-PA 236 GH18952-PA 12..110 38..137 303 62 Plus
Dgri\GH15102-PA 131 GH15102-PA 14..109 40..126 142 37.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:25:00
Subject Length Description Subject Range Query Range Score Percent Strand
Cpr97Ea-PA 366 CG6131-PA 1..366 1..366 1958 100 Plus
Cpr97Ea-PB 363 CG6131-PB 1..363 4..366 1944 100 Plus
Cpr97Eb-PA 235 CG15884-PA 11..214 38..215 352 43.9 Plus
Cpr100A-PA 241 CG12045-PA 5..206 38..233 214 32.1 Plus
CG15021-PA 420 CG15021-PA 139..363 129..326 181 31 Plus
osa-PE 2555 CG7467-PE 1245..1530 96..356 176 29.1 Plus
osa-PC 2556 CG7467-PC 1246..1531 96..356 176 29.1 Plus
osa-PF 2559 CG7467-PF 1249..1534 96..356 176 29.1 Plus
osa-PA 2703 CG7467-PA 1393..1678 96..356 176 29.1 Plus
osa-PB 2716 CG7467-PB 1406..1691 96..356 176 29.1 Plus
osa-PD 2716 CG7467-PD 1406..1691 96..356 176 29.1 Plus
CG15021-PA 420 CG15021-PA 58..274 118..332 170 27.4 Plus
CG15021-PA 420 CG15021-PA 99..280 140..328 158 26.7 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 12:23:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI23279-PA 349 GI23279-PA 1..349 1..366 1068 74.4 Plus
Dmoj\GI23278-PA 223 GI23278-PA 12..93 56..137 295 69.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 12:23:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL23618-PA 366 GL23618-PA 1..366 1..366 1123 72.8 Plus
Dper\GL23617-PA 231 GL23617-PA 11..109 38..137 303 62 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 12:23:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA23225-PA 366 GA23225-PA 1..366 1..366 1130 73 Plus
Dpse\GA14004-PA 231 GA14004-PA 11..109 38..137 303 62 Plus
Dpse\GA26662-PA 231 GA26662-PA 11..109 38..137 303 62 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 12:23:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM10137-PA 366 GM10137-PA 1..366 1..366 1817 98.4 Plus
Dsec\GM10136-PA 235 GM10136-PA 28..109 56..137 305 70.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 12:23:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD18097-PA 235 GD18097-PA 28..109 56..137 306 70.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 12:23:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ24137-PA 356 GJ24137-PA 1..356 1..366 1106 73 Plus
Dvir\GJ24136-PA 246 GJ24136-PA 35..116 56..137 297 69.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 12:23:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK12038-PA 359 GK12038-PA 1..359 1..366 1187 74.5 Plus
Dwil\GK12037-PA 239 GK12037-PA 10..109 37..137 301 61.4 Plus
Dwil\GK14160-PA 235 GK14160-PA 1..217 4..230 146 28.2 Plus
Dwil\GK20646-PA 108 GK20646-PA 25..93 56..119 142 42 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 12:23:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE10591-PA 368 GE10591-PA 1..368 1..366 1802 97.6 Plus
Dyak\GE10590-PA 235 GE10590-PA 28..109 56..137 305 70.7 Plus