Clone FI21821 Report

Search the DGRC for FI21821

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:218
Well:21
Vector:pFlc-1
Associated Gene/Transcriptnmdyn-D7-RA
Protein status:FI21821.pep: gold
Sequenced Size:1407

Clone Sequence Records

FI21821.complete Sequence

1407 bp assembled on 2013-07-17

GenBank Submission: BT150178.1

> FI21821.complete
ACTGTTGCTGTGACAACGCGGGAAAGAAGAAGCAAAATTGAAATGCAAAG
CAAACAAACAGTTATCACTCGAAATAAAGGACTTGCTGTCAAGCGATAGA
ACGGAAAAGCAAGGTATAAGATTCCCCTCAAAACGATACCATGAAACCCG
CTGCGATTCCGGCTAGCGAGCGGCGTCTGGCCTTCGTGGCCGAGTGGTTC
CATGCAGAGGCTGGAATCATACGCACCTTTCTGATCACCTACTATGTATC
CGACAAGGCCGTGGAAGTGTTCGACCAGCGCAACAAGCGCACATTTCTGC
GACGCACCAAGATCCCGGAGCTGACCCAGCGCGACTTCTTTGTGGGCTCC
AAGATCAATGTCTTTGGCCGGCAGTTTGACATTGTGGATTATGCTGACGA
CACTACGCGGACAAACCTAGCCAAATATCGCAAGAAGGGATTCGTTTTGC
TCAAGAACAATATGTGGACGAAGCACCTGGGCAAGTTCCTAAAGACTCTG
ATCGACAACAAGATTAACATAAACCAGGGCATGATGGTTCAGTTCTCTCC
CAAAATGGTAACTCAGTTTCTGTCCGGCAAGGACACGACGGATGTCTCCT
CTTCAGTCCTTATGAACGAGCTGCTGGCTGGTCCGGCCATTAGTCTGGAG
CTAATCGGCGACAACGTAGTGGAGACCATCAAGGCCTGCGCCCAGTACAA
GAGCACAGAGGCGGAAACACCCAGTGTGAAACTGTCGCCCAGTTTGGAAG
AGCTGTTTGAAAGTGAGGAGATTCGTTATGGATTTTACTACTCTGATAAC
GACAACGACGTGGAAATGGACCTAAAGTTCATATCTGAGGCGAGGCACAG
CATAATTAAAGAATGTGTATTCAAGAATACAACACTTGCCATCATTAAGC
CGCACAGCATCAAGGATGGTCTCCTGGGAGACATCATTTCCGAAATCCTG
TCGAATGGCTTTCGGTTGACAGCCATGCGCATGATTCTAATGGCCCGAAT
CAACTGCGAGGAGTTCTACGAAGTCTACCGCGGAGTGGTGCCCGAGTATA
TACCCATGGTTGCTCAGTTGGCCAGTGGAGTATGCATGTGCATGGAGATT
GCTTGCGCCGATCCCGAAAAGAAAACTGATCGCGAGTTCCGCAACTTCTG
TGGACCCATGGATCCGGAGATCGCCAAACTGTTGCGGCCTCACACGCTGC
GCGCCAAGTTCGGCAAGTCCAAGGTGCAGAACGCCGTCCACTGCACTGAT
CTGCCAGATGACTCCAACCTGGAGCTGCAGTATATGTTCAAGATAATCGA
CTGATCTTAGTTTAGTTTTTATTTGTTTTCAGTTAAATGCATGTTTGCCT
GTGTGCGTTTATCAATAAATTACAAGTGCAATGAAAATACCAAAAAAAAA
AAAAAAA

FI21821.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 11:18:28
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 5506546..5507331 605..1390 3900 99.7 Plus
chr3R 27901430 chr3R 5505770..5506038 1..269 1330 99.6 Plus
chr3R 27901430 chr3R 5506102..5506270 269..437 845 100 Plus
chr3R 27901430 chr3R 5506328..5506495 437..604 840 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 11:18:26
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 9680717..9681502 605..1390 3930 100 Plus
3R 32079331 3R 9679941..9680209 1..269 1330 99.6 Plus
3R 32079331 3R 9680273..9680441 269..437 845 100 Plus
3R 32079331 3R 9680499..9680666 437..604 840 100 Plus
Blast to na_te.dros performed 2019-03-15 11:18:27
Subject Length Description Subject Range Query Range Score Percent Strand
flea 5034 flea DMBLPP 5034bp Derived from Z27119 (g415797) (Rel. 50, Last updated, Version 6). 1768..1830 849..912 137 72.3 Plus
McClintock 6450 McClintock McCLINTOCK 6450bp 1074..1140 1338..1273 116 65.7 Minus
transib4 2656 transib4 TRANSIB4 2656bp 1186..1242 25..82 116 69 Plus

FI21821.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 11:19:13 Download gff for FI21821.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 5505770..5506038 1..269 99 -> Plus
chr3R 5506103..5506269 270..436 100 -> Plus
chr3R 5506328..5506495 437..604 100 -> Plus
chr3R 5506546..5507331 605..1391 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2013-07-17 16:36:15 Download gff for FI21821.complete
Subject Subject Range Query Range Percent Splice Strand
nmdyn-D7-RA 1..1164 141..1304 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:26:51 Download gff for FI21821.complete
Subject Subject Range Query Range Percent Splice Strand
nmdyn-D7-RA 1..1164 141..1304 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:29:48 Download gff for FI21821.complete
Subject Subject Range Query Range Percent Splice Strand
nmdyn-D7-RA 1..1164 141..1304 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-07-17 16:36:15 Download gff for FI21821.complete
Subject Subject Range Query Range Percent Splice Strand
nmdyn-D7-RA 1..1390 1..1390 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:26:51 Download gff for FI21821.complete
Subject Subject Range Query Range Percent Splice Strand
nmdyn-D7-RA 3..1392 1..1390 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:29:48 Download gff for FI21821.complete
Subject Subject Range Query Range Percent Splice Strand
nmdyn-D7-RA 3..1392 1..1390 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:19:13 Download gff for FI21821.complete
Subject Subject Range Query Range Percent Splice Strand
3R 9679941..9680209 1..269 99 -> Plus
3R 9680274..9680440 270..436 100 -> Plus
3R 9680499..9680666 437..604 100 -> Plus
3R 9680717..9681502 605..1391 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:19:13 Download gff for FI21821.complete
Subject Subject Range Query Range Percent Splice Strand
3R 9679941..9680209 1..269 99 -> Plus
3R 9680274..9680440 270..436 100 -> Plus
3R 9680499..9680666 437..604 100 -> Plus
3R 9680717..9681502 605..1391 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:19:13 Download gff for FI21821.complete
Subject Subject Range Query Range Percent Splice Strand
3R 9679941..9680209 1..269 99 -> Plus
3R 9680274..9680440 270..436 100 -> Plus
3R 9680499..9680666 437..604 100 -> Plus
3R 9680717..9681502 605..1391 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:26:51 Download gff for FI21821.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 5505996..5506162 270..436 100 -> Plus
arm_3R 5506221..5506388 437..604 100 -> Plus
arm_3R 5505663..5505931 1..269 99 -> Plus
arm_3R 5506439..5507224 605..1391 99   Plus

FI21821.pep Sequence

Translation from 140 to 1303

> FI21821.pep
MKPAAIPASERRLAFVAEWFHAEAGIIRTFLITYYVSDKAVEVFDQRNKR
TFLRRTKIPELTQRDFFVGSKINVFGRQFDIVDYADDTTRTNLAKYRKKG
FVLLKNNMWTKHLGKFLKTLIDNKININQGMMVQFSPKMVTQFLSGKDTT
DVSSSVLMNELLAGPAISLELIGDNVVETIKACAQYKSTEAETPSVKLSP
SLEELFESEEIRYGFYYSDNDNDVEMDLKFISEARHSIIKECVFKNTTLA
IIKPHSIKDGLLGDIISEILSNGFRLTAMRMILMARINCEEFYEVYRGVV
PEYIPMVAQLASGVCMCMEIACADPEKKTDREFRNFCGPMDPEIAKLLRP
HTLRAKFGKSKVQNAVHCTDLPDDSNLELQYMFKIID*

FI21821.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 12:25:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF23065-PA 384 GF23065-PA 1..384 1..387 1740 85.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 12:25:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG17026-PA 387 GG17026-PA 1..387 1..387 1887 95.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 12:25:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH19407-PA 381 GH19407-PA 1..381 6..387 1504 70.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:14:33
Subject Length Description Subject Range Query Range Score Percent Strand
nmdyn-D7-PA 387 CG8362-PA 1..387 1..387 1997 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 12:25:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI22610-PA 380 GI22610-PA 2..380 8..387 1540 72.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 12:25:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL12370-PA 387 GL12370-PA 7..387 9..387 1572 79.8 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 12:25:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA21019-PA 387 GA21019-PA 7..387 9..387 1557 79 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 12:25:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM23827-PA 349 GM23827-PA 1..349 1..387 1802 88.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 12:25:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD18638-PA 387 GD18638-PA 1..387 1..387 2055 98.4 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 12:25:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ23855-PA 381 GJ23855-PA 1..381 6..387 1531 72.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 12:25:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK14513-PA 379 GK14513-PA 2..379 9..387 1645 78.6 Plus
Dwil\GK19226-PA 139 GK19226-PA 6..133 248..383 156 30.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 12:25:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE25974-PA 387 GE25974-PA 1..387 1..387 1937 95.6 Plus

FI21821.hyp Sequence

Translation from 140 to 1303

> FI21821.hyp
MKPAAIPASERRLAFVAEWFHAEAGIIRTFLITYYVSDKAVEVFDQRNKR
TFLRRTKIPELTQRDFFVGSKINVFGRQFDIVDYADDTTRTNLAKYRKKG
FVLLKNNMWTKHLGKFLKTLIDNKININQGMMVQFSPKMVTQFLSGKDTT
DVSSSVLMNELLAGPAISLELIGDNVVETIKACAQYKSTEAETPSVKLSP
SLEELFESEEIRYGFYYSDNDNDVEMDLKFISEARHSIIKECVFKNTTLA
IIKPHSIKDGLLGDIISEILSNGFRLTAMRMILMARINCEEFYEVYRGVV
PEYIPMVAQLASGVCMCMEIACADPEKKTDREFRNFCGPMDPEIAKLLRP
HTLRAKFGKSKVQNAVHCTDLPDDSNLELQYMFKIID*

FI21821.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:58:53
Subject Length Description Subject Range Query Range Score Percent Strand
nmdyn-D7-PA 387 CG8362-PA 1..387 1..387 1997 100 Plus