Clone FI21824 Report

Search the DGRC for FI21824

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:218
Well:24
Vector:pFlc-1
Associated Gene/TranscriptCG17475-RA
Protein status:FI21824.pep: gold
Sequenced Size:1019

Clone Sequence Records

FI21824.complete Sequence

1019 bp assembled on 2013-07-17

GenBank Submission: BT150168.1

> FI21824.complete
AATTGTCGCATTGAAAGTCAAGCACCCACCACCATTATGGTTCGACTGGG
TGTTGTGCAGATCCTGGTGATCCTGCTAGCTTGTACTTGCTATAAGCCCA
TTAGCGCCGTGCGTTTGGCGCAGCTTAGTGAGGATCAGCTGGAGTGGATC
TCGAAGGCGGAAGGAGTCAACTTCCAGAATCGCGTAATCAATGGCGAAGA
TGTGCAGTTGGGCGAGGCCAAGTACCAGATATCGTTGCAGGGAATGTACG
GAGGTCACATATGTGGCGGATGCATCATCGACGAACGCCATGTCCTGACG
GCAGCCCACTGCGTATATGGCTATAACCCCACCTATCTGCGAGTGATCAC
AGGAACTGTGGAGTACGAAAAGCCGGATGCCGTGTATTTCGTGGAGGAGC
ATTGGATTCACTGCAACTACAACAGTCCCGACTACCACAATGATATTGCC
TTGATTCGGCTAAACGATACGATCAAGTTCAATGAGTACACTCAACCGGC
TGAGCTGCCCACAGCTCCGGTGGCAAATGGGACGCAGTTGCTCCTCACGG
GCTGGGGCTCAACGGAACTTTGGGGCGATACGCCCGATATACTGCAAAAG
GCTTATCTCACGCATGTCGTGTACTCGACTTGCCAGGAGATAATGAACAA
CGATCCGTCGAACGGTCCATGTCATATCTGCACACTGACGACTGGTGGAC
AAGGAGCCTGCCATGGCGATTCCGGCGGTCCGCTGACGCACAACGGAGTA
CTCTACGGTCTGGTCAATTGGGGTTATCCCTGTGCACTTGGAGTTCCCGA
TAGTCACGCCAACGTGTACTATTATCTGGAATGGATCAGAAGCATGATCT
CGGGACCATGTAGCAACTGTCACTGCTATGCCAGTAACTATCCCAGCCTG
TGATCCAAGGGGACGACGATATGCTGAGCAAGATATACAATTTTGATTAG
GTAAGAATGTACGGTGACTAACTTGTGGAAATAAAATCAATGGCAGATTA
ACAATAAAAAAAAAAAAAA

FI21824.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 11:16:19
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 12953839..12954843 1005..1 4980 99.7 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 11:16:17
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 17129408..17130419 1012..1 5045 99.9 Minus
Blast to na_te.dros performed on 2019-03-15 11:16:18 has no hits.

FI21824.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 11:17:08 Download gff for FI21824.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 12953839..12954843 1..1005 99   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2013-07-17 09:23:08 Download gff for FI21824.complete
Subject Subject Range Query Range Percent Splice Strand
CG17475-RA 1..867 37..903 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:26:00 Download gff for FI21824.complete
Subject Subject Range Query Range Percent Splice Strand
CG17475-RA 1..867 37..903 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:28:16 Download gff for FI21824.complete
Subject Subject Range Query Range Percent Splice Strand
CG17475-RA 1..867 37..903 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-07-17 09:23:08 Download gff for FI21824.complete
Subject Subject Range Query Range Percent Splice Strand
CG17475-RA 1..1005 1..1005 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:26:00 Download gff for FI21824.complete
Subject Subject Range Query Range Percent Splice Strand
CG17475-RA 8..1012 1..1005 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:28:16 Download gff for FI21824.complete
Subject Subject Range Query Range Percent Splice Strand
CG17475-RA 8..1012 1..1005 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:17:08 Download gff for FI21824.complete
Subject Subject Range Query Range Percent Splice Strand
3R 17129415..17130419 1..1005 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:17:08 Download gff for FI21824.complete
Subject Subject Range Query Range Percent Splice Strand
3R 17129415..17130419 1..1005 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:17:08 Download gff for FI21824.complete
Subject Subject Range Query Range Percent Splice Strand
3R 17129415..17130419 1..1005 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:26:00 Download gff for FI21824.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 12955137..12956141 1..1005 100   Minus

FI21824.hyp Sequence

Translation from 0 to 902

> FI21824.hyp
NCRIESQAPTTIMVRLGVVQILVILLACTCYKPISAVRLAQLSEDQLEWI
SKAEGVNFQNRVINGEDVQLGEAKYQISLQGMYGGHICGGCIIDERHVLT
AAHCVYGYNPTYLRVITGTVEYEKPDAVYFVEEHWIHCNYNSPDYHNDIA
LIRLNDTIKFNEYTQPAELPTAPVANGTQLLLTGWGSTELWGDTPDILQK
AYLTHVVYSTCQEIMNNDPSNGPCHICTLTTGGQGACHGDSGGPLTHNGV
LYGLVNWGYPCALGVPDSHANVYYYLEWIRSMISGPCSNCHCYASNYPSL
*

FI21824.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:57:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG17475-PB 288 CG17475-PB 1..288 13..300 1599 100 Plus
CG17475-PA 288 CG17475-PA 1..288 13..300 1599 100 Plus
CG31269-PB 273 CG31269-PB 5..271 21..296 673 48.2 Plus
CG31265-PA 266 CG31265-PA 36..265 61..293 630 49.8 Plus
CG17477-PA 267 CG17477-PA 27..253 62..285 602 47.1 Plus

FI21824.pep Sequence

Translation from 0 to 902

> FI21824.pep
NCRIESQAPTTIMVRLGVVQILVILLACTCYKPISAVRLAQLSEDQLEWI
SKAEGVNFQNRVINGEDVQLGEAKYQISLQGMYGGHICGGCIIDERHVLT
AAHCVYGYNPTYLRVITGTVEYEKPDAVYFVEEHWIHCNYNSPDYHNDIA
LIRLNDTIKFNEYTQPAELPTAPVANGTQLLLTGWGSTELWGDTPDILQK
AYLTHVVYSTCQEIMNNDPSNGPCHICTLTTGGQGACHGDSGGPLTHNGV
LYGLVNWGYPCALGVPDSHANVYYYLEWIRSMISGPCSNCHCYASNYPSL
*

FI21824.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 12:23:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF17862-PA 288 GF17862-PA 1..288 13..299 1142 74 Plus
Dana\GF17129-PA 274 GF17129-PA 5..271 21..296 683 48.9 Plus
Dana\GF19903-PA 267 GF19903-PA 37..261 61..285 599 50.2 Plus
Dana\GF17863-PA 269 GF17863-PA 26..255 59..285 597 48.3 Plus
Dana\GF17133-PA 278 GF17133-PA 28..254 60..284 561 48.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 12:23:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG16790-PA 288 GG16790-PA 1..288 13..300 1451 92.7 Plus
Dere\GG22017-PA 273 GG22017-PA 18..272 34..297 644 48.9 Plus
Dere\GG22028-PA 266 GG22028-PA 36..265 61..293 598 48.9 Plus
Dere\GG16791-PA 267 GG16791-PA 24..253 59..285 571 44.8 Plus
Dere\GG22071-PA 273 GG22071-PA 27..254 59..284 559 47.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 12:23:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH14252-PA 282 GH14252-PA 18..281 34..297 875 60.8 Plus
Dgri\GH14062-PA 266 GH14062-PA 1..260 22..285 646 46.2 Plus
Dgri\GH14253-PA 260 GH14253-PA 22..248 62..285 546 44.9 Plus
Dgri\GH14067-PA 282 GH14067-PA 27..253 60..284 543 47.6 Plus
Dgri\GH14066-PA 271 GH14066-PA 38..271 59..290 526 45.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:11:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG17475-PB 288 CG17475-PB 1..288 13..300 1599 100 Plus
CG17475-PA 288 CG17475-PA 1..288 13..300 1599 100 Plus
CG31269-PB 273 CG31269-PB 5..271 21..296 673 48.2 Plus
CG31265-PA 266 CG31265-PA 36..265 61..293 630 49.8 Plus
CG17477-PA 267 CG17477-PA 27..253 62..285 602 47.1 Plus
CG5255-PA 273 CG5255-PA 27..254 59..284 562 47.4 Plus
CG5246-PA 272 CG5246-PA 4..272 16..290 531 41 Plus
CG4053-PB 265 CG4053-PB 33..262 60..289 495 43.3 Plus
CG31267-PA 275 CG31267-PA 6..271 17..285 461 37.4 Plus
CG31266-PB 282 CG31266-PB 49..278 59..285 454 41.3 Plus
CG17571-PB 258 CG17571-PB 23..251 55..279 353 36.2 Plus
CG17571-PA 258 CG17571-PA 23..251 55..279 353 36.2 Plus
thetaTry-PA 262 CG12385-PA 4..255 22..279 329 32.2 Plus
CG6041-PA 308 CG6041-PA 21..269 48..279 321 34.7 Plus
CG31954-PA 277 CG31954-PA 9..272 18..280 318 31.3 Plus
CG1304-PA 260 CG1304-PA 27..255 57..281 310 30.6 Plus
CG4386-PA 372 CG4386-PA 122..362 57..287 298 29.8 Plus
alphaTry-PA 256 CG18444-PA 30..251 61..281 297 33.2 Plus
Ser6-PA 259 CG2071-PA 31..254 61..280 296 30.4 Plus
epsilonTry-PA 256 CG18681-PA 30..249 61..279 295 32.1 Plus
Try29F-PD 267 CG9564-PD 41..264 61..282 295 32.7 Plus
Try29F-PC 267 CG9564-PC 41..264 61..282 295 32.7 Plus
gammaTry-PA 253 CG30028-PA 30..251 61..281 292 31.4 Plus
deltaTry-PA 253 CG12351-PA 30..251 61..281 292 31.4 Plus
CG30031-PA 253 CG30031-PA 30..251 61..281 292 31.4 Plus
CG8299-PA 260 CG8299-PA 20..252 54..279 292 29.7 Plus
iotaTry-PA 252 CG7754-PA 16..245 50..279 291 32.6 Plus
CG30025-PA 253 CG30025-PA 30..249 61..279 291 31.2 Plus
lambdaTry-PA 272 CG12350-PA 5..256 18..279 287 30.2 Plus
etaTry-PA 262 CG12386-PA 27..254 61..279 283 33.3 Plus
CG16749-PA 265 CG16749-PA 21..258 53..280 283 33.1 Plus
betaTry-PB 253 CG18211-PB 30..249 61..279 278 31.5 Plus
betaTry-PA 253 CG18211-PA 30..249 61..279 278 31.5 Plus
CG7829-PA 253 CG7829-PA 27..228 61..263 277 32.2 Plus
CG12951-PA 265 CG12951-PA 28..259 60..281 277 31.8 Plus
CG3355-PA 314 CG3355-PA 74..312 60..292 276 31.8 Plus
CG18735-PA 364 CG18735-PA 60..331 48..299 275 29.2 Plus
CG32834-PB 556 CG32834-PB 24..252 59..279 274 32.3 Plus
zetaTry-PA 280 CG12387-PA 7..279 16..285 272 31.1 Plus
CG14780-PA 302 CG14780-PA 28..279 57..288 271 30.7 Plus
CG34458-PA 257 CG34458-PA 29..252 59..280 268 31.3 Plus
CG6048-PA 362 CG6048-PA 45..284 61..279 268 34.3 Plus
CG4653-PA 254 CG4653-PA 32..249 69..279 267 31.4 Plus
CG32376-PA 291 CG32376-PA 61..288 57..283 266 29 Plus
CG11911-PA 277 CG11911-PA 13..271 34..284 265 30.6 Plus
CG32755-PA 315 CG32755-PA 37..272 61..280 265 33.5 Plus
MP1-PA 390 CG1102-PA 121..388 55..283 265 32.3 Plus
MP1-PC 399 CG1102-PC 130..397 55..283 265 32.3 Plus
MP1-PE 400 CG1102-PE 131..398 55..283 265 32.3 Plus
CG9372-PA 408 CG9372-PA 201..402 88..279 265 34.6 Plus
CG17234-PA 251 CG17234-PA 12..248 47..284 259 30.8 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 12:23:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI23144-PA 284 GI23144-PA 5..282 18..297 928 61.6 Plus
Dmoj\GI24438-PA 269 GI24438-PA 33..263 55..285 619 48.9 Plus
Dmoj\GI24442-PA 279 GI24442-PA 29..256 59..284 539 46.9 Plus
Dmoj\GI23145-PA 265 GI23145-PA 26..252 62..285 524 43.2 Plus
Dmoj\GI24441-PA 272 GI24441-PA 1..263 13..281 508 41.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 12:23:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL27214-PA 286 GL27214-PA 1..286 12..300 1035 66.3 Plus
Dper\GL27271-PA 271 GL27271-PA 6..268 22..295 658 48.2 Plus
Dper\GL27272-PA 264 GL27272-PA 33..264 60..294 624 50.2 Plus
Dper\GL27215-PA 268 GL27215-PA 15..263 49..291 570 44.6 Plus
Dper\GL27275-PA 273 GL27275-PA 1..273 13..290 534 41.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 12:23:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA14522-PA 286 GA14522-PA 1..286 12..300 1031 66 Plus
Dpse\GA16138-PA 271 GA16138-PA 6..268 22..295 670 48.9 Plus
Dpse\GA14523-PA 268 GA14523-PA 21..263 55..291 577 46.5 Plus
Dpse\GA18766-PA 280 GA18766-PA 31..256 61..284 555 47.3 Plus
Dpse\GA18759-PA 273 GA18759-PA 1..273 13..290 529 41.1 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 12:23:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM15383-PA 289 GM15383-PA 1..289 12..300 1434 91.7 Plus
Dsec\GM15210-PA 266 GM15210-PA 36..265 61..293 592 49.8 Plus
Dsec\GM15384-PA 267 GM15384-PA 27..253 62..285 572 46.3 Plus
Dsec\GM15215-PA 273 GM15215-PA 28..254 60..284 550 47.6 Plus
Dsec\GM15213-PA 272 GM15213-PA 1..272 13..290 506 40.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 12:23:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD20249-PA 288 GD20249-PA 1..288 13..300 1466 94.8 Plus
Dsim\GD19140-PA 274 GD19140-PA 36..273 59..297 637 51.9 Plus
Dsim\GD19141-PA 266 GD19141-PA 36..265 61..293 599 50.6 Plus
Dsim\GD20250-PA 267 GD20250-PA 27..253 62..285 579 46.7 Plus
Dsim\GD19145-PA 273 GD19145-PA 27..254 59..284 554 47.4 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 12:23:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ10446-PA 290 GJ10446-PA 23..288 32..297 1004 68.9 Plus
Dvir\GJ10713-PA 268 GJ10713-PA 36..262 59..285 602 48.9 Plus
Dvir\GJ10718-PA 280 GJ10718-PA 31..257 60..284 546 48 Plus
Dvir\GJ10447-PA 268 GJ10447-PA 29..255 62..285 533 44.1 Plus
Dvir\GJ10717-PA 272 GJ10717-PA 37..272 56..290 513 44.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 12:23:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK10884-PA 290 GK10884-PA 1..290 12..300 866 57.7 Plus
Dwil\GK12196-PA 282 GK12196-PA 32..272 60..300 673 52.3 Plus
Dwil\GK12195-PA 272 GK12195-PA 35..260 60..285 654 53.1 Plus
Dwil\GK10885-PA 274 GK10885-PA 10..269 34..291 618 44.5 Plus
Dwil\GK12201-PA 260 GK12201-PA 14..240 60..284 553 47.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 12:23:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE26105-PA 296 GE26105-PA 1..288 13..300 1458 92.7 Plus
Dyak\GE24613-PA 274 GE24613-PA 1..273 16..297 648 46.1 Plus
Dyak\GE24614-PA 266 GE24614-PA 36..265 61..293 595 49.8 Plus
Dyak\GE26106-PA 267 GE26106-PA 24..259 59..289 558 43.6 Plus
Dyak\GE10113-PA 277 GE10113-PA 28..254 60..284 545 47.1 Plus