Clone FI21847 Report

Search the DGRC for FI21847

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:218
Well:47
Vector:pFlc-1
Associated Gene/TranscriptAlg10-RA
Protein status:FI21847.pep: gold
Sequenced Size:1540

Clone Sequence Records

FI21847.complete Sequence

1540 bp assembled on 2013-07-17

GenBank Submission: BT150155.1

> FI21847.complete
GGTCCATTTCCACGCGTTGCCGGCTGGTTGAGTCCAAAAATAAACAAATC
CAATTGGAGCATTCTCGTTTGGAAGGCGTCGGCTCAAAAGGATCGCCTAC
CATGAATGGGTCCTGGAAACTAATCCTGCCCGTGGGCTTTGTGCTGTACT
CGCTGCCACTTTTCCTGCGGGTGAATGGCACATCGGACTATGTAATCGAC
GAGGAGTTCCACATTCCGCAGGGATTGGCCTTTTGCCGCAAGGAATTCGA
TGTGTGGGATCCCAAGATAACAACATTTCCGGGCCTCTATCTGATCGCCC
TGCTCCTGAATCCCCTAAGTCTGTGCACGGTGACGGGCCTGAGGATGCTC
AGCCTAGCAGGTGCCGGCATCAATATTCTGCTGCTCTACAAGATCAGACG
GCGCATCCTGGCCGGCTCGGGTGGCAACTCATATGCCGCCCATGAGGCTA
TCACCATGTCCGTGCTTCCGCCGCTCTACTTCTTTAGCCACCTTTACTAC
ACGGACACCTTGTCGCTGACCATGGTGCTTCTGTTCTACAACTATTGGCA
GCAGGAGGCGCACCTGCCGGCGGCGGTCTTTGGGGCTGCCAGTGTGCTTA
TGCGCCAGACGAATATCGTGTGGGTATGCATGGCCACCGGAATGACTGTG
CTGGACACGTTGGTCAATCAATGCGCCCGCACTGGGCGCGTTCCCAAGGA
AAATGTTCGACTGATGGGCAAAGAGTTGTGGCTTCAACTCGTTAGCAGCC
CCCAATTGCTGTGCAATTGCATCCTGAGCATCTTGGCCAAGTGCTGTTTC
TACGCTTCGATCATTCTGCCGTTCGTGGGATTCCTCTTCATCAATGGTTC
CATTGTGGTGGGCGACAAGAGTGCCCACGAGGCCAGTTTGCATGTGCCGC
AGCTATTCTACTTCGCCATCTTTGCGGCTGGCTTTGGGATATCCAACACC
ATACGTCAGTTTCGTCCGGCAGCAGAATTAATACGCAGGAATCGCGTGCT
GTCCCTATTGGCATTGCTGCTCATACTGGTGGTGGTGCACCTAAACACCG
AAGTGCATCCCTACCTGCTGGCTGACAACAGACACTATACATTCTATATA
TGGAGCCGACTTTATGGACGGTTCTGGTGGTTCCGCTACGCCATGGCGCC
CGCTTATCTGCTCTCGATTTGCGTACTCTTTTGCGGACTACGTCACATGC
CGGAAAGCTTTAAGTTAATGTTTCCACTTAGTCTATTCCTGGTGCTGTGC
TTCCAGCGACTCCTGGAGCTGCGCTACTTCCTGGTGCCGTACATTCTGTT
TCGACTCAACACACGGCACACTCGCAAGGGTTACGCCGAGTGGCTGGAGC
TCGGAGCTCATCTGCTGCTCAATGTGGCCACGTTTTACGTGTACTTTACA
AAGGAGTTCTACTGGAAAAACTACCGCACTCCTCAAAGGATCATATGGTA
GTTCCTTTAAACGGCATTCCTTAACAATTCAATAACGTCTTGGGCATTTA
TGAAATAAAACAGTTCGACATTTTCAAAAAAAAAAAAAAA

FI21847.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 11:18:09
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 11156666..11157467 724..1525 3965 99.6 Plus
chr3L 24539361 chr3L 11156132..11156603 254..725 2345 99.8 Plus
chr3L 24539361 chr3L 11155823..11156075 2..254 1250 99.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 11:18:07
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 11165819..11166622 724..1527 4020 100 Plus
3L 28110227 3L 11165285..11165763 254..732 2365 99.6 Plus
3L 28110227 3L 11164976..11165228 2..254 1265 100 Plus
Blast to na_te.dros performed on 2019-03-15 11:18:07 has no hits.

FI21847.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 11:19:03 Download gff for FI21847.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 11155822..11156075 1..254 99 -> Plus
chr3L 11156133..11156603 255..725 99 -> Plus
chr3L 11156668..11157467 726..1525 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2013-07-17 16:29:14 Download gff for FI21847.complete
Subject Subject Range Query Range Percent Splice Strand
Alg10-RA 1..1350 102..1451 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:26:39 Download gff for FI21847.complete
Subject Subject Range Query Range Percent Splice Strand
Alg10-RA 1..1350 102..1451 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:29:30 Download gff for FI21847.complete
Subject Subject Range Query Range Percent Splice Strand
Alg10-RA 1..1350 102..1451 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-07-17 16:29:14 Download gff for FI21847.complete
Subject Subject Range Query Range Percent Splice Strand
Alg10-RA 2..1525 2..1525 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:26:39 Download gff for FI21847.complete
Subject Subject Range Query Range Percent Splice Strand
Alg10-RA 5..1529 1..1525 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:29:30 Download gff for FI21847.complete
Subject Subject Range Query Range Percent Splice Strand
Alg10-RA 5..1529 1..1525 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:19:03 Download gff for FI21847.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11164975..11165228 1..254 99 -> Plus
3L 11165286..11165756 255..725 100 -> Plus
3L 11165821..11166620 726..1525 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:19:03 Download gff for FI21847.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11164975..11165228 1..254 99 -> Plus
3L 11165286..11165756 255..725 100 -> Plus
3L 11165821..11166620 726..1525 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:19:03 Download gff for FI21847.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11164975..11165228 1..254 99 -> Plus
3L 11165286..11165756 255..725 100 -> Plus
3L 11165821..11166620 726..1525 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:26:39 Download gff for FI21847.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 11158075..11158328 1..254 99 -> Plus
arm_3L 11158386..11158856 255..725 100 -> Plus
arm_3L 11158921..11159720 726..1525 100   Plus

FI21847.hyp Sequence

Translation from 2 to 1450

> FI21847.hyp
SISTRCRLVESKNKQIQLEHSRLEGVGSKGSPTMNGSWKLILPVGFVLYS
LPLFLRVNGTSDYVIDEEFHIPQGLAFCRKEFDVWDPKITTFPGLYLIAL
LLNPLSLCTVTGLRMLSLAGAGINILLLYKIRRRILAGSGGNSYAAHEAI
TMSVLPPLYFFSHLYYTDTLSLTMVLLFYNYWQQEAHLPAAVFGAASVLM
RQTNIVWVCMATGMTVLDTLVNQCARTGRVPKENVRLMGKELWLQLVSSP
QLLCNCILSILAKCCFYASIILPFVGFLFINGSIVVGDKSAHEASLHVPQ
LFYFAIFAAGFGISNTIRQFRPAAELIRRNRVLSLLALLLILVVVHLNTE
VHPYLLADNRHYTFYIWSRLYGRFWWFRYAMAPAYLLSICVLFCGLRHMP
ESFKLMFPLSLFLVLCFQRLLELRYFLVPYILFRLNTRHTRKGYAEWLEL
GAHLLLNVATFYVYFTKEFYWKNYRTPQRIIW*

FI21847.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:58:37
Subject Length Description Subject Range Query Range Score Percent Strand
Alg10-PA 449 CG32076-PA 1..449 34..482 2373 100 Plus

FI21847.pep Sequence

Translation from 2 to 1450

> FI21847.pep
SISTRCRLVESKNKQIQLEHSRLEGVGSKGSPTMNGSWKLILPVGFVLYS
LPLFLRVNGTSDYVIDEEFHIPQGLAFCRKEFDVWDPKITTFPGLYLIAL
LLNPLSLCTVTGLRMLSLAGAGINILLLYKIRRRILAGSGGNSYAAHEAI
TMSVLPPLYFFSHLYYTDTLSLTMVLLFYNYWQQEAHLPAAVFGAASVLM
RQTNIVWVCMATGMTVLDTLVNQCARTGRVPKENVRLMGKELWLQLVSSP
QLLCNCILSILAKCCFYASIILPFVGFLFINGSIVVGDKSAHEASLHVPQ
LFYFAIFAAGFGISNTIRQFRPAAELIRRNRVLSLLALLLILVVVHLNTE
VHPYLLADNRHYTFYIWSRLYGRFWWFRYAMAPAYLLSICVLFCGLRHMP
ESFKLMFPLSLFLVLCFQRLLELRYFLVPYILFRLNTRHTRKGYAEWLEL
GAHLLLNVATFYVYFTKEFYWKNYRTPQRIIW*

FI21847.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 12:24:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF25248-PA 449 GF25248-PA 1..449 34..482 2125 87.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 12:24:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG15485-PA 449 GG15485-PA 1..449 34..482 2307 96.7 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 12:24:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH14834-PA 449 GH14834-PA 1..449 34..482 1941 81.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:29:38
Subject Length Description Subject Range Query Range Score Percent Strand
Alg10-PA 449 CG32076-PA 1..449 34..482 2373 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 12:24:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI13687-PA 449 GI13687-PA 1..449 34..482 1901 80.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 12:24:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL22766-PA 449 GL22766-PA 1..449 34..482 2055 82.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 12:24:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA16660-PA 449 GA16660-PA 1..449 34..482 2052 82.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 12:24:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM25257-PA 449 GM25257-PA 1..449 34..482 2322 97.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 12:24:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD14291-PA 449 GD14291-PA 1..449 34..482 2336 98.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 12:24:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ14029-PA 449 GJ14029-PA 1..449 34..482 1997 82.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 12:24:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK20340-PA 447 GK20340-PA 1..447 34..482 1922 79.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 12:24:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE21795-PA 449 GE21795-PA 1..449 34..482 2316 97.1 Plus