Clone FI21859 Report

Search the DGRC for FI21859

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:218
Well:59
Vector:pFlc-1
Associated Gene/TranscriptCG2006-RA
Protein status:FI21859.pep: gold
Sequenced Size:1126

Clone Sequence Records

FI21859.complete Sequence

1126 bp assembled on 2013-07-17

GenBank Submission: BT150176.1

> FI21859.complete
AATAGGAAATTTGTTATTTCAATTTAAAAAGTTGACTTTCCGCTAAAATG
ACGCATCCGCTGGAGGCGCCGCAGCGCAGCCGCAAATACCCCTTCGTGCA
TATGCGCATCGCGGACCACAGCGCACTGGACACCATCGAGGGGCGCCACA
ACTGCCGCCTGTGCAACCGATCGCGCAAGTTCTTCTGCTACAGCTGCTGT
GTGCCGGTTGGCGAGCTGGAGGAGCTGCTGCCACGTCTGGAGCTGCCGCT
CCAAGTGGACATCATTAAGCACAAAAAGGAAATCGACGGCAAGAGCTCGG
CGGTGCACGCGGCCGTTCTGGCGCCGGCGCACGTGAGGATCCACACATTT
CCGGACATTCCCGACTATCGCGAGGAGGCGGGCGTAGTGCTCATATTCCC
AAGCGCCACTGCGCTTGCGGTGCCGCAGCTCTTCGCGCGCAATGTGCAGC
TTCAGATCGGCGACAACTACGGGCTGCCCAAGGGCCACCACATGGGCACC
ATGCTGCGCAGGCGAATGGACGAGGTGGAGGTAAAGGAGCTGCAGGAGGA
GGTAGATGAGCCGGAGACGGTGCGACGAACCTGGACGCTAGACAACCTGC
CCGTCCGCCGAGCCGTCTTCATAGACAGCACATGGAACCAGAGTCGCGGG
ATCTACGCGGACGCCAGGGTGCGCGGCCTACGAACGGTGGTGCTGCAGAA
TCGACTGTCGCAATTCTGGCGCCACCAGCGCGGCAGTCCGCGCTGGTATC
TGGCCACCATCGAGGCCATTCACCAGTTCCTCCTGGAGGTGCACATCAAT
GCCTGGGGCCTGAACACCGCCTATCGCGGACTCGATAACCTGGAGATCAC
CGCGGGCTTCCATCAGCTGGCAGAGCCGCTGACCAAGACAGCTGCCAGTG
AGAATGTGGGCAGGGAGGCGCCCTACAATGGGCAGTACGACAATCTGCTC
TTCTTCTTCGCCCACATGTACGATCTCATCCACAAGTACTATGACCACAA
CGACCTCATCGCCTACCGACGACCCATCTAGCGTTCTAATGGACATACAT
ATGTATATATATATATTATATTGGATGTAGTGAGAAGTACACGTAACTGC
TGGCCTAACAAAAAAAAAAAAAAAAA

FI21859.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 11:16:28
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 25312099..25313204 2..1109 5340 99 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 11:16:26
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 29489498..29490606 1..1109 5545 100 Plus
Blast to na_te.dros performed on 2019-03-15 11:16:26 has no hits.

FI21859.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 11:17:13 Download gff for FI21859.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 25312098..25313204 1..1109 98   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2013-07-17 09:23:11 Download gff for FI21859.complete
Subject Subject Range Query Range Percent Splice Strand
CG2006-RA 1..984 48..1031 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:26:04 Download gff for FI21859.complete
Subject Subject Range Query Range Percent Splice Strand
CG2006-RA 1..984 48..1031 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:28:24 Download gff for FI21859.complete
Subject Subject Range Query Range Percent Splice Strand
CG2006-RA 1..984 48..1031 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-07-17 09:23:11 Download gff for FI21859.complete
Subject Subject Range Query Range Percent Splice Strand
CG2006-RA 28..1136 1..1109 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:26:04 Download gff for FI21859.complete
Subject Subject Range Query Range Percent Splice Strand
CG2006-RA 31..1139 1..1109 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:28:24 Download gff for FI21859.complete
Subject Subject Range Query Range Percent Splice Strand
CG2006-RA 31..1139 1..1109 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:17:13 Download gff for FI21859.complete
Subject Subject Range Query Range Percent Splice Strand
3R 29489498..29490606 1..1109 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:17:13 Download gff for FI21859.complete
Subject Subject Range Query Range Percent Splice Strand
3R 29489498..29490606 1..1109 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:17:13 Download gff for FI21859.complete
Subject Subject Range Query Range Percent Splice Strand
3R 29489498..29490606 1..1109 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:26:04 Download gff for FI21859.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 25315220..25316328 1..1109 100   Plus

FI21859.hyp Sequence

Translation from 47 to 1030

> FI21859.hyp
MTHPLEAPQRSRKYPFVHMRIADHSALDTIEGRHNCRLCNRSRKFFCYSC
CVPVGELEELLPRLELPLQVDIIKHKKEIDGKSSAVHAAVLAPAHVRIHT
FPDIPDYREEAGVVLIFPSATALAVPQLFARNVQLQIGDNYGLPKGHHMG
TMLRRRMDEVEVKELQEEVDEPETVRRTWTLDNLPVRRAVFIDSTWNQSR
GIYADARVRGLRTVVLQNRLSQFWRHQRGSPRWYLATIEAIHQFLLEVHI
NAWGLNTAYRGLDNLEITAGFHQLAEPLTKTAASENVGREAPYNGQYDNL
LFFFAHMYDLIHKYYDHNDLIAYRRPI*

FI21859.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:57:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG2006-PB 327 CG2006-PB 1..327 1..327 1745 100 Plus
CG2006-PA 327 CG2006-PA 1..327 1..327 1745 100 Plus

FI21859.pep Sequence

Translation from 47 to 1030

> FI21859.pep
MTHPLEAPQRSRKYPFVHMRIADHSALDTIEGRHNCRLCNRSRKFFCYSC
CVPVGELEELLPRLELPLQVDIIKHKKEIDGKSSAVHAAVLAPAHVRIHT
FPDIPDYREEAGVVLIFPSATALAVPQLFARNVQLQIGDNYGLPKGHHMG
TMLRRRMDEVEVKELQEEVDEPETVRRTWTLDNLPVRRAVFIDSTWNQSR
GIYADARVRGLRTVVLQNRLSQFWRHQRGSPRWYLATIEAIHQFLLEVHI
NAWGLNTAYRGLDNLEITAGFHQLAEPLTKTAASENVGREAPYNGQYDNL
LFFFAHMYDLIHKYYDHNDLIAYRRPI*

FI21859.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 12:23:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF23343-PA 326 GF23343-PA 1..326 1..327 1420 79.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 12:23:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG11664-PA 322 GG11664-PA 1..322 1..327 1487 89.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 12:23:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH18899-PA 326 GH18899-PA 1..326 1..327 1370 78.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:56:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG2006-PB 327 CG2006-PB 1..327 1..327 1745 100 Plus
CG2006-PA 327 CG2006-PA 1..327 1..327 1745 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 12:23:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI23114-PA 321 GI23114-PA 1..321 1..327 1353 76.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 12:23:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL13890-PA 323 GL13890-PA 1..323 1..327 1467 82.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 12:23:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA26960-PA 323 GA26960-PA 1..323 1..327 1464 82.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 12:23:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM12787-PA 327 GM12787-PA 1..327 1..327 1713 96.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 12:23:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD21437-PA 327 GD21437-PA 1..327 1..327 1699 96 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 12:23:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ10604-PA 321 GJ10604-PA 1..321 1..327 1401 80.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 12:23:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK11897-PA 325 GK11897-PA 1..325 1..327 1367 76.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 12:23:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE23852-PA 319 GE23852-PA 1..319 1..327 1490 89.6 Plus