Clone FI21919 Report

Search the DGRC for FI21919

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:219
Well:19
Vector:pOTB7
Associated Gene/TranscriptCG31245-RA
Protein status:FI21919.pep: gold
Sequenced Size:992

Clone Sequence Records

FI21919.complete Sequence

992 bp assembled on 2013-09-12

GenBank Submission: BT150235.1

> FI21919.complete
TGTGAGAAATGTAAAAATTCTGGTTAACTACCCAAGAATACAAAATAAAC
CGGATAAGATGTAATGCCAAGATGGTACTAGAAAGCTGTAAAAAAAAGCA
AAATTCAGATTAAAAAAAAAAAATAATTTAAGAGTAAACTTTTTGGATAT
ACGACAAAATCTGTAAAATAAAATCAAAAAATGACGGCCACACAAAAACT
CCGAACATCGACGATGGAGTGGTGCGATCGAAACTCGAGACCCAAGTCAT
CGATACCCAATCCCGCCGTTCGTCCGGAACCTACTAGATGGCAAAAGCCA
GGACCGATGAGCCGGAATGAGTGGGCCAACTTCCACAAAACTTACCAAGT
AGATACAATGGCCTATAACCAAAGATTGCAGGGTGGAAAGCAAAAGCGAG
ATAGCAAACCCATTGTTGAGAAGCCTTCCTTGCCAGAAGTTAGTCCTCTA
ACGGAAAACCAATATCGTCTGAGTATGCCACGCTGGCAGCGCCAAAAGTA
TATCCCACCGCCACCGGAACAGTTTCCCTATCGACCACAAATCATCGGCC
AAAGTGCTCCTCCACGTCCGGAACATGGTAGACCAGTTCAAAGGCCAGTG
GTTCCGTGCTGCTTTCAGCACGTGGATCTCGAGAACGAGTTTTGGTCTAA
CTTGCGGTTTCCTGTGTCGCGGAAAGCACTCACAGCCCGTCCCAGTAAGA
AGATCTATGAACTGGCCCGGCCACGACAATATCCACAGAAATCCCACTGC
CCGGTGCCCAGCAGCAACGAGGGGGAGGTGCCCAGACTTCGGAAAATGAC
CCCGCGGGAGTGGCGACATCATCTGCAGCGACTAGAGTTCCTAGCAAAAC
CAAATCCTCGGGTTTTGGCCGATTTACTGTGCTGCTGTCACTAAATTGGA
CCAAAAAGATTACTCCTTAGGTACAGATCACTTACGAAATAAAGTAGATT
GACCTGTAGTTAAGAATTAAAAAAAAAAAAAAAAAAAAAAAA

FI21919.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-17 00:19:23
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 15200107..15200673 968..402 2805 99.6 Minus
chr3R 27901430 chr3R 15200737..15201140 404..1 1945 98.8 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-17 00:19:21
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 19376193..19376761 970..402 2830 99.8 Minus
3R 32079331 3R 19376825..19377228 404..1 1945 98.8 Minus
Blast to na_te.dros performed 2019-03-17 00:19:22
Subject Length Description Subject Range Query Range Score Percent Strand
297 6995 297 DMIS297 6995bp Derived from X03431 (g8146) (Rel. 36, Last updated, Version 2). 709..818 68..176 124 61.9 Plus

FI21919.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-17 00:20:34 Download gff for FI21919.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 15200107..15200670 405..968 99 <- Minus
chr3R 15200737..15201140 1..404 93   Minus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-09-12 17:16:02 Download gff for FI21919.complete
Subject Subject Range Query Range Percent Splice Strand
CG31245-RA 1..714 181..894 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:24:10 Download gff for FI21919.complete
Subject Subject Range Query Range Percent Splice Strand
CG31245-RA 1..714 181..894 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-12 17:16:02 Download gff for FI21919.complete
Subject Subject Range Query Range Percent Splice Strand
CG31245-RA 1..965 4..968 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:24:10 Download gff for FI21919.complete
Subject Subject Range Query Range Percent Splice Strand
CG31245-RA 1..965 4..968 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 00:20:34 Download gff for FI21919.complete
Subject Subject Range Query Range Percent Splice Strand
3R 19376195..19376758 405..968 99 <- Minus
3R 19376825..19377228 1..404 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 00:20:34 Download gff for FI21919.complete
Subject Subject Range Query Range Percent Splice Strand
3R 19376195..19376758 405..968 99 <- Minus
3R 19376825..19377228 1..404 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 00:20:34 Download gff for FI21919.complete
Subject Subject Range Query Range Percent Splice Strand
3R 19376195..19376758 405..968 99 <- Minus
3R 19376825..19377228 1..404 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-12 17:16:02 Download gff for FI21919.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 15201917..15202480 405..968 99 <- Minus
arm_3R 15202547..15202950 1..404 98   Minus

FI21919.pep Sequence

Translation from 180 to 893

> FI21919.pep
MTATQKLRTSTMEWCDRNSRPKSSIPNPAVRPEPTRWQKPGPMSRNEWAN
FHKTYQVDTMAYNQRLQGGKQKRDSKPIVEKPSLPEVSPLTENQYRLSMP
RWQRQKYIPPPPEQFPYRPQIIGQSAPPRPEHGRPVQRPVVPCCFQHVDL
ENEFWSNLRFPVSRKALTARPSKKIYELARPRQYPQKSHCPVPSSNEGEV
PRLRKMTPREWRHHLQRLEFLAKPNPRVLADLLCCCH*

FI21919.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:52:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF18463-PA 237 GF18463-PA 1..234 1..232 613 54.5 Plus
Dana\GF19945-PA 265 GF19945-PA 33..260 10..232 295 38.1 Plus
Dana\GF18464-PA 254 GF18464-PA 21..246 10..227 248 35 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:52:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG16008-PA 236 GG16008-PA 1..235 1..236 990 80.1 Plus
Dere\GG16019-PA 278 GG16019-PA 47..276 10..235 274 37.1 Plus
Dere\GG16030-PA 253 GG16030-PA 21..245 10..227 189 33.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:16:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG31245-PA 237 CG31245-PA 1..237 1..237 1319 100 Plus
CG31404-PA 274 CG31404-PA 51..268 14..227 295 36 Plus
CG3581-PA 253 CG3581-PA 21..245 10..227 279 33.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:52:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL11968-PA 250 GL11968-PA 7..248 8..237 490 45.3 Plus
Dper\GL12645-PA 256 GL12645-PA 31..248 10..227 261 36.4 Plus
Dper\GL11969-PA 259 GL11969-PA 26..251 10..227 254 35 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:52:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA16119-PB 250 GA16119-PB 7..248 8..237 442 44.9 Plus
Dpse\GA27579-PA 256 GA27579-PA 31..248 10..227 264 36.9 Plus
Dpse\GA17535-PB 259 GA17535-PB 26..251 10..227 254 35 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:52:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM26910-PA 236 GM26910-PA 1..236 1..237 1123 90.7 Plus
Dsec\GM26912-PA 253 GM26912-PA 21..245 10..227 235 33 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:52:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD20116-PA 236 GD20116-PA 1..236 1..237 1130 91.1 Plus
Dsim\GD20118-PA 253 GD20118-PA 21..245 10..227 235 33 Plus
Dsim\GD20117-PA 196 GD20117-PA 1..190 43..227 200 33.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:52:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK13479-PA 1892 GK13479-PA 1506..1690 13..193 202 32.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:52:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE25131-PA 236 GE25131-PA 1..236 1..237 1014 81 Plus
Dyak\GE25132-PA 278 GE25132-PA 47..265 10..224 274 36.6 Plus
Dyak\GE25133-PA 253 GE25133-PA 21..245 10..227 191 33.3 Plus

FI21919.hyp Sequence

Translation from 180 to 893

> FI21919.hyp
MTATQKLRTSTMEWCDRNSRPKSSIPNPAVRPEPTRWQKPGPMSRNEWAN
FHKTYQVDTMAYNQRLQGGKQKRDSKPIVEKPSLPEVSPLTENQYRLSMP
RWQRQKYIPPPPEQFPYRPQIIGQSAPPRPEHGRPVQRPVVPCCFQHVDL
ENEFWSNLRFPVSRKALTARPSKKIYELARPRQYPQKSHCPVPSSNEGEV
PRLRKMTPREWRHHLQRLEFLAKPNPRVLADLLCCCH*

FI21919.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:00:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG31245-PA 237 CG31245-PA 1..237 1..237 1319 100 Plus
CG31404-PA 274 CG31404-PA 51..268 14..227 295 36 Plus
CG3581-PA 253 CG3581-PA 21..245 10..227 279 33.5 Plus