Clone Sequence Records
FI21920.complete Sequence
981 bp assembled on 2013-07-17
GenBank Submission: BT150173.1
> FI21920.complete
ATTTTAACCCCCTCTTTTTGGGCTTCTGAACATTTTTCAAATTCGAAAGT
CACACTGAAATTGGAAAGACAAAATTGGTAGTAAAGCATTTCAACAGAAT
GCCAGTACAGGAAATGTTTGCTATTATGGACAACATTTACCATGGATTGC
GCCGCTGCTTCGGACCTGAAAATCAGATTGAACCCCCAAAGTATCCAGCT
TACAATACGTTGAAAAAACTTGGTAAGCGACGTCGCAGAGTATGTAAAAG
CATTCTCGGTTCGAAACATATACGGAGGAATCATTTTTCCACCAGCGAAG
AAAGCGTCCAAAATTTGAGTGCCTCAGAACTCAAGGAGTATTTTGCAAGG
CCAAAGTTAACAGCTCCCAAGACGGTGAGCCATGAGCCCGGCATAAGCCC
TTCGATTGACCTGATACATCGTCGGCGACTCCAAAACCGCCCGCTGATGT
TGAATGCCTGGCAGGTTCTTCAAGTTCAGTGGGGCGGTTGGTGGCAGAGG
TGCTGGCCCACTCTAGTGGCAGCCAGTATGCAGATGAGCTGCGGATCATC
GGTCCTTTGCCATTCGCTGTTGGGGCTCTACGATGACGAGGAATCAAGTC
CACCAATCGTGGTGCTCATGTGTTACTTTGGCCAGGCGATTAAAAAGCTT
TGCAAACACGCTGACTTGGCCATTTGTAGCAATGGCCATAGTCCCAATTA
TGTGACCACATCGGCTGCCATGGAGCTGATTGACATTCGCGACTTTTTTC
AACATATTAACAATGCCCTGGTAGACTTCCTGCTCAGAGCCGCCGAATCC
GGAATGTATATGGGCGATCAATTGGATTACAATAACTGAGAAATCCTCCA
AAAAAAAAAGTGATGCATAAATATGTAACATAAACTTTAAAAAGACAGCT
AACCAGCATCCATTATGGTCTTATACACTGAAACGAACATTTTCAATAAA
TAACTTTTAGGACAAAAAAAAAAAAAAAAAA
FI21920.complete Blast Records
Blast to d_melanogaster_OreR.fa performed 2019-03-15 11:18:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3R | 27901430 | chr3R | 15665029..15665393 | 173..537 | 1810 | 99.7 | Plus |
chr3R | 27901430 | chr3R | 15665626..15665943 | 646..963 | 1575 | 99.7 | Plus |
chr3R | 27901430 | chr3R | 15664799..15664970 | 1..172 | 845 | 99.4 | Plus |
chr3R | 27901430 | chr3R | 15665452..15665567 | 532..647 | 580 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 11:17:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 19841128..19841492 | 173..537 | 1810 | 99.7 | Plus |
3R | 32079331 | 3R | 19841725..19842043 | 646..966 | 1540 | 99.4 | Plus |
3R | 32079331 | 3R | 19840898..19841069 | 1..172 | 860 | 100 | Plus |
3R | 32079331 | 3R | 19841551..19841666 | 532..647 | 580 | 100 | Plus |
Blast to na_te.dros performed 2019-03-15 11:17:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Quasimodo | 7387 | Quasimodo QUASIMODO 7387bp Derived from P1 clones DS08479 & DS07153 by Sue Celniker, 29 March 2001. | 2236..2288 | 148..96 | 112 | 67.9 | Minus |
FI21920.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 11:18:57 Download gff for
FI21920.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3R | 15664799..15664970 | 1..172 | 99 | -> | Plus |
chr3R | 15665029..15665389 | 173..533 | 100 | -> | Plus |
chr3R | 15665454..15665567 | 534..647 | 100 | -> | Plus |
chr3R | 15665628..15665943 | 648..963 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2013-07-17 16:29:06 Download gff for
FI21920.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31459-RA | 1..741 | 99..839 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:26:33 Download gff for
FI21920.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31459-RA | 1..741 | 99..839 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:29:19 Download gff for
FI21920.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31459-RA | 1..741 | 99..839 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-07-17 16:29:06 Download gff for
FI21920.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31459-RA | 54..1014 | 1..963 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:26:33 Download gff for
FI21920.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31459-RA | 54..1014 | 1..963 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:29:19 Download gff for
FI21920.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31459-RA | 54..1014 | 1..963 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:18:57 Download gff for
FI21920.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 19840898..19841069 | 1..172 | 100 | -> | Plus |
3R | 19841128..19841488 | 173..533 | 100 | -> | Plus |
3R | 19841553..19841666 | 534..647 | 100 | -> | Plus |
3R | 19841727..19842040 | 648..963 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:18:57 Download gff for
FI21920.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 19840898..19841069 | 1..172 | 100 | -> | Plus |
3R | 19841128..19841488 | 173..533 | 100 | -> | Plus |
3R | 19841553..19841666 | 534..647 | 100 | -> | Plus |
3R | 19841727..19842040 | 648..963 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:18:57 Download gff for
FI21920.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 19840898..19841069 | 1..172 | 100 | -> | Plus |
3R | 19841128..19841488 | 173..533 | 100 | -> | Plus |
3R | 19841553..19841666 | 534..647 | 100 | -> | Plus |
3R | 19841727..19842040 | 648..963 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:26:33 Download gff for
FI21920.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 15667449..15667762 | 648..963 | 99 | | Plus |
arm_3R | 15666850..15667210 | 173..533 | 100 | -> | Plus |
arm_3R | 15667275..15667388 | 534..647 | 100 | -> | Plus |
arm_3R | 15666620..15666791 | 1..172 | 100 | -> | Plus |
FI21920.pep Sequence
Translation from 98 to 838
> FI21920.pep
MPVQEMFAIMDNIYHGLRRCFGPENQIEPPKYPAYNTLKKLGKRRRRVCK
SILGSKHIRRNHFSTSEESVQNLSASELKEYFARPKLTAPKTVSHEPGIS
PSIDLIHRRRLQNRPLMLNAWQVLQVQWGGWWQRCWPTLVAASMQMSCGS
SVLCHSLLGLYDDEESSPPIVVLMCYFGQAIKKLCKHADLAICSNGHSPN
YVTTSAAMELIDIRDFFQHINNALVDFLLRAAESGMYMGDQLDYNN*
FI21920.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 12:24:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF17619-PA | 239 | GF17619-PA | 1..228 | 1..229 | 394 | 41.6 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 12:24:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG23516-PA | 242 | GG23516-PA | 1..242 | 1..246 | 1095 | 81.3 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:59:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31459-PA | 246 | CG31459-PA | 1..246 | 1..246 | 1321 | 100 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 12:24:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM26865-PA | 246 | GM26865-PA | 1..246 | 1..246 | 1219 | 89.4 | Plus |
Dsec\GM16205-PA | 60 | GM16205-PA | 1..60 | 187..246 | 298 | 88.3 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 12:24:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD19315-PA | 246 | GD19315-PA | 1..246 | 1..246 | 1216 | 90.2 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 12:24:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE25627-PA | 239 | GE25627-PA | 1..238 | 1..238 | 1067 | 81.5 | Plus |
FI21920.hyp Sequence
Translation from 98 to 838
> FI21920.hyp
MPVQEMFAIMDNIYHGLRRCFGPENQIEPPKYPAYNTLKKLGKRRRRVCK
SILGSKHIRRNHFSTSEESVQNLSASELKEYFARPKLTAPKTVSHEPGIS
PSIDLIHRRRLQNRPLMLNAWQVLQVQWGGWWQRCWPTLVAASMQMSCGS
SVLCHSLLGLYDDEESSPPIVVLMCYFGQAIKKLCKHADLAICSNGHSPN
YVTTSAAMELIDIRDFFQHINNALVDFLLRAAESGMYMGDQLDYNN*
FI21920.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:58:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31459-PA | 246 | CG31459-PA | 1..246 | 1..246 | 1321 | 100 | Plus |