Clone FI21920 Report

Search the DGRC for FI21920

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:219
Well:20
Vector:pOTB7
Associated Gene/TranscriptCG31459-RA
Protein status:FI21920.pep: gold
Sequenced Size:981

Clone Sequence Records

FI21920.complete Sequence

981 bp assembled on 2013-07-17

GenBank Submission: BT150173.1

> FI21920.complete
ATTTTAACCCCCTCTTTTTGGGCTTCTGAACATTTTTCAAATTCGAAAGT
CACACTGAAATTGGAAAGACAAAATTGGTAGTAAAGCATTTCAACAGAAT
GCCAGTACAGGAAATGTTTGCTATTATGGACAACATTTACCATGGATTGC
GCCGCTGCTTCGGACCTGAAAATCAGATTGAACCCCCAAAGTATCCAGCT
TACAATACGTTGAAAAAACTTGGTAAGCGACGTCGCAGAGTATGTAAAAG
CATTCTCGGTTCGAAACATATACGGAGGAATCATTTTTCCACCAGCGAAG
AAAGCGTCCAAAATTTGAGTGCCTCAGAACTCAAGGAGTATTTTGCAAGG
CCAAAGTTAACAGCTCCCAAGACGGTGAGCCATGAGCCCGGCATAAGCCC
TTCGATTGACCTGATACATCGTCGGCGACTCCAAAACCGCCCGCTGATGT
TGAATGCCTGGCAGGTTCTTCAAGTTCAGTGGGGCGGTTGGTGGCAGAGG
TGCTGGCCCACTCTAGTGGCAGCCAGTATGCAGATGAGCTGCGGATCATC
GGTCCTTTGCCATTCGCTGTTGGGGCTCTACGATGACGAGGAATCAAGTC
CACCAATCGTGGTGCTCATGTGTTACTTTGGCCAGGCGATTAAAAAGCTT
TGCAAACACGCTGACTTGGCCATTTGTAGCAATGGCCATAGTCCCAATTA
TGTGACCACATCGGCTGCCATGGAGCTGATTGACATTCGCGACTTTTTTC
AACATATTAACAATGCCCTGGTAGACTTCCTGCTCAGAGCCGCCGAATCC
GGAATGTATATGGGCGATCAATTGGATTACAATAACTGAGAAATCCTCCA
AAAAAAAAAGTGATGCATAAATATGTAACATAAACTTTAAAAAGACAGCT
AACCAGCATCCATTATGGTCTTATACACTGAAACGAACATTTTCAATAAA
TAACTTTTAGGACAAAAAAAAAAAAAAAAAA

FI21920.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 11:18:01
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 15665029..15665393 173..537 1810 99.7 Plus
chr3R 27901430 chr3R 15665626..15665943 646..963 1575 99.7 Plus
chr3R 27901430 chr3R 15664799..15664970 1..172 845 99.4 Plus
chr3R 27901430 chr3R 15665452..15665567 532..647 580 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 11:17:59
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 19841128..19841492 173..537 1810 99.7 Plus
3R 32079331 3R 19841725..19842043 646..966 1540 99.4 Plus
3R 32079331 3R 19840898..19841069 1..172 860 100 Plus
3R 32079331 3R 19841551..19841666 532..647 580 100 Plus
Blast to na_te.dros performed 2019-03-15 11:17:59
Subject Length Description Subject Range Query Range Score Percent Strand
Quasimodo 7387 Quasimodo QUASIMODO 7387bp Derived from P1 clones DS08479 & DS07153 by Sue Celniker, 29 March 2001. 2236..2288 148..96 112 67.9 Minus

FI21920.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 11:18:57 Download gff for FI21920.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 15664799..15664970 1..172 99 -> Plus
chr3R 15665029..15665389 173..533 100 -> Plus
chr3R 15665454..15665567 534..647 100 -> Plus
chr3R 15665628..15665943 648..963 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2013-07-17 16:29:06 Download gff for FI21920.complete
Subject Subject Range Query Range Percent Splice Strand
CG31459-RA 1..741 99..839 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:26:33 Download gff for FI21920.complete
Subject Subject Range Query Range Percent Splice Strand
CG31459-RA 1..741 99..839 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:29:19 Download gff for FI21920.complete
Subject Subject Range Query Range Percent Splice Strand
CG31459-RA 1..741 99..839 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-07-17 16:29:06 Download gff for FI21920.complete
Subject Subject Range Query Range Percent Splice Strand
CG31459-RA 54..1014 1..963 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:26:33 Download gff for FI21920.complete
Subject Subject Range Query Range Percent Splice Strand
CG31459-RA 54..1014 1..963 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:29:19 Download gff for FI21920.complete
Subject Subject Range Query Range Percent Splice Strand
CG31459-RA 54..1014 1..963 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:18:57 Download gff for FI21920.complete
Subject Subject Range Query Range Percent Splice Strand
3R 19840898..19841069 1..172 100 -> Plus
3R 19841128..19841488 173..533 100 -> Plus
3R 19841553..19841666 534..647 100 -> Plus
3R 19841727..19842040 648..963 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:18:57 Download gff for FI21920.complete
Subject Subject Range Query Range Percent Splice Strand
3R 19840898..19841069 1..172 100 -> Plus
3R 19841128..19841488 173..533 100 -> Plus
3R 19841553..19841666 534..647 100 -> Plus
3R 19841727..19842040 648..963 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:18:57 Download gff for FI21920.complete
Subject Subject Range Query Range Percent Splice Strand
3R 19840898..19841069 1..172 100 -> Plus
3R 19841128..19841488 173..533 100 -> Plus
3R 19841553..19841666 534..647 100 -> Plus
3R 19841727..19842040 648..963 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:26:33 Download gff for FI21920.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 15667449..15667762 648..963 99   Plus
arm_3R 15666850..15667210 173..533 100 -> Plus
arm_3R 15667275..15667388 534..647 100 -> Plus
arm_3R 15666620..15666791 1..172 100 -> Plus

FI21920.pep Sequence

Translation from 98 to 838

> FI21920.pep
MPVQEMFAIMDNIYHGLRRCFGPENQIEPPKYPAYNTLKKLGKRRRRVCK
SILGSKHIRRNHFSTSEESVQNLSASELKEYFARPKLTAPKTVSHEPGIS
PSIDLIHRRRLQNRPLMLNAWQVLQVQWGGWWQRCWPTLVAASMQMSCGS
SVLCHSLLGLYDDEESSPPIVVLMCYFGQAIKKLCKHADLAICSNGHSPN
YVTTSAAMELIDIRDFFQHINNALVDFLLRAAESGMYMGDQLDYNN*

FI21920.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 12:24:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF17619-PA 239 GF17619-PA 1..228 1..229 394 41.6 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 12:24:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG23516-PA 242 GG23516-PA 1..242 1..246 1095 81.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:59:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG31459-PA 246 CG31459-PA 1..246 1..246 1321 100 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 12:24:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM26865-PA 246 GM26865-PA 1..246 1..246 1219 89.4 Plus
Dsec\GM16205-PA 60 GM16205-PA 1..60 187..246 298 88.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 12:24:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD19315-PA 246 GD19315-PA 1..246 1..246 1216 90.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 12:24:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE25627-PA 239 GE25627-PA 1..238 1..238 1067 81.5 Plus

FI21920.hyp Sequence

Translation from 98 to 838

> FI21920.hyp
MPVQEMFAIMDNIYHGLRRCFGPENQIEPPKYPAYNTLKKLGKRRRRVCK
SILGSKHIRRNHFSTSEESVQNLSASELKEYFARPKLTAPKTVSHEPGIS
PSIDLIHRRRLQNRPLMLNAWQVLQVQWGGWWQRCWPTLVAASMQMSCGS
SVLCHSLLGLYDDEESSPPIVVLMCYFGQAIKKLCKHADLAICSNGHSPN
YVTTSAAMELIDIRDFFQHINNALVDFLLRAAESGMYMGDQLDYNN*

FI21920.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:58:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG31459-PA 246 CG31459-PA 1..246 1..246 1321 100 Plus