Clone FI21938 Report

Search the DGRC for FI21938

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:219
Well:38
Vector:pOTB7
Associated Gene/TranscriptCG14011-RA
Protein status:FI21938.pep: gold
Sequenced Size:1504

Clone Sequence Records

FI21938.complete Sequence

1504 bp assembled on 2013-07-17

GenBank Submission: BT150164.1

> FI21938.complete
AAGAAACGAAAAAGTTTATTGTTCGCTATTCCAACACACAAACTTAAACA
CTTTTCATAGACTTCAAAGTTTATCGGTTCTGAAGCCAGCAAGGTGTTCC
ATAAATCGTCTCTGACGACGTATTGAATTTGAATATTGGCTACACAAGAA
GAAACGAAGAGCACTGCAAAATGGCATTTCTGGGCAAAGTCAACAGTCAG
GGAACCCTTATCGACCATGAACTATTCTGCATGACCCAGCCCAGCCAGCA
GGATTCAGATGGCCAAGCCAGAGAGATGGGGGCTCGTGTACTGCTACCGC
GAAGAAAGGGTTCCAGGACTTTCATCAAGACCTGTGACAAGGACAGCCTC
GTGCGCTCTATGGGTAGCCCCAGCACAGTGCGCTACGTGGGCAGCTCCGA
GTCGTCCAGTGAAGTCAACTCATTGGACGAGACGGAGACCTCCACTCTGC
GCTGCTGCTCGGATTTGTCCCTGGGCACCCTGAAGTCGACCAAGACAATT
GAGGGGCCCCGCGTCGGTGAACTGGGAGAGGATATCGAGCTGCAGACGGA
GTCGGAGACGGTCTGCCTGCATCTGGGCAGTCCCAGCAGTAGCACCAGCA
CGGACCGGAGTAGCTGCAGCAGCCGATCCTGCCCCTCTTCCCGCAGCGGC
AACAATTCCAGCGACAAGGACTCGACGACCTCGATGTGCAGCTGGGAGGA
GGCCATGTCCCGGGACGACAGCATGCTGGCCCCGCTCGAGTTGCCACTAA
GCCACAGCCTGCCCTCGCTGCGCCTGGGATCGAGCGTAGGATCGCCGCCC
CTTACCTACACCCGCCGCATCGAACCGCTCCATATCCGGCGGTCCGCCGG
TGAGGCCTACGAGAACTGGCTGTCCGGCAAGCAACGCCAGTGCCAGTACA
AGTTGCAGGCGCAGCAGGCCGAGAGAGAGGCGCAGCGGCAGCGAACGGAG
CTGAGGCAGCGGCTCGCCAAGGAGAAGTACGAGCAGTGGTGTCAGCAGAA
GGCGCAGCAGACCACCAGTACCGCCAAGCTCACCAAGCCCGACCGTTCTG
CCCAGCTGCCGCCGCAAAAGAATATGGCGTCTGTGCAACATCACCTGCAG
GAGTGGGAGCTGCACAAGCTTAGGCTGCTCGAACAGCGTCGCCTCGAGCA
GCGGAATGCCGAGCGGCGGCGCCAGGAGGAGAAGGCCGCCCGCCGCTCGC
AGGCGGAAGAGGCCTTCAGTCGGTGGATGAGCAACGTGGCCCAGAGGCCC
AAGCCCGTCCCCTCCAGCCAGGGAATGAAGTCGCTGCGCGGCACCGTTTC
CGACATCTTTATAAACCCCAAGCAGTGGGTGAATTAAGCTGGTCGGATTT
GAAATGGTCGGAGGTGGGGAGAAGTGTATGGCCTGGACAGGCTGCCTAAT
AGGTGAGAGTTAGCTCGCCATGTGAAACCAAAGTTTTAACAAGTGTAACC
ATATTTATTTATTTAGCACTATTAAATACCCGAAAAAAAAAAAAAAAAAA
AAAA

FI21938.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 11:18:18
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 5578678..5580004 1482..156 6605 99.8 Minus
chr2L 23010047 chr2L 5580064..5580214 151..1 740 99.3 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 11:18:16
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 5579576..5580906 1486..156 6625 99.8 Minus
2L 23513712 2L 5580966..5581116 151..1 740 99.3 Minus
Blast to na_te.dros performed 2019-03-15 11:18:16
Subject Length Description Subject Range Query Range Score Percent Strand
roo 9092 roo DM_ROO 9092bp 1096..1144 577..625 119 71.4 Plus

FI21938.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 11:19:07 Download gff for FI21938.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 5578678..5580008 152..1482 99 <- Minus
chr2L 5580064..5580214 1..151 99   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2013-07-17 16:36:10 Download gff for FI21938.complete
Subject Subject Range Query Range Percent Splice Strand
CG14011-RA 1..1167 171..1337 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:26:47 Download gff for FI21938.complete
Subject Subject Range Query Range Percent Splice Strand
CG14011-RA 1..1167 171..1337 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:29:38 Download gff for FI21938.complete
Subject Subject Range Query Range Percent Splice Strand
CG14011-RA 1..1167 171..1337 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-07-17 16:36:10 Download gff for FI21938.complete
Subject Subject Range Query Range Percent Splice Strand
CG14011-RA 1..1482 1..1482 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:26:47 Download gff for FI21938.complete
Subject Subject Range Query Range Percent Splice Strand
CG14011-RA 1..1482 1..1482 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:29:38 Download gff for FI21938.complete
Subject Subject Range Query Range Percent Splice Strand
CG14011-RA 1..1482 1..1482 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:19:07 Download gff for FI21938.complete
Subject Subject Range Query Range Percent Splice Strand
2L 5579580..5580910 152..1482 99 <- Minus
2L 5580966..5581116 1..151 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:19:07 Download gff for FI21938.complete
Subject Subject Range Query Range Percent Splice Strand
2L 5579580..5580910 152..1482 99 <- Minus
2L 5580966..5581116 1..151 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:19:07 Download gff for FI21938.complete
Subject Subject Range Query Range Percent Splice Strand
2L 5579580..5580910 152..1482 99 <- Minus
2L 5580966..5581116 1..151 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:26:47 Download gff for FI21938.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 5579580..5580910 152..1482 99 <- Minus
arm_2L 5580966..5581116 1..151 99   Minus

FI21938.pep Sequence

Translation from 170 to 1336

> FI21938.pep
MAFLGKVNSQGTLIDHELFCMTQPSQQDSDGQAREMGARVLLPRRKGSRT
FIKTCDKDSLVRSMGSPSTVRYVGSSESSSEVNSLDETETSTLRCCSDLS
LGTLKSTKTIEGPRVGELGEDIELQTESETVCLHLGSPSSSTSTDRSSCS
SRSCPSSRSGNNSSDKDSTTSMCSWEEAMSRDDSMLAPLELPLSHSLPSL
RLGSSVGSPPLTYTRRIEPLHIRRSAGEAYENWLSGKQRQCQYKLQAQQA
EREAQRQRTELRQRLAKEKYEQWCQQKAQQTTSTAKLTKPDRSAQLPPQK
NMASVQHHLQEWELHKLRLLEQRRLEQRNAERRRQEEKAARRSQAEEAFS
RWMSNVAQRPKPVPSSQGMKSLRGTVSDIFINPKQWVN*

FI21938.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 12:25:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF14313-PA 396 GF14313-PA 1..395 1..387 877 52.7 Plus
Dana\GF15574-PA 508 GF15574-PA 224..496 138..387 309 34.2 Plus
Dana\GF14312-PA 300 GF14312-PA 78..284 195..386 260 32.7 Plus
Dana\GF14333-PA 314 GF14333-PA 87..307 197..387 212 30.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 12:25:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG24294-PA 400 GG24294-PA 1..400 1..388 1452 78.4 Plus
Dere\GG25087-PA 512 GG25087-PA 245..500 145..387 275 34.6 Plus
Dere\GG24293-PA 296 GG24293-PA 78..288 214..387 222 29.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 12:25:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH10701-PA 394 GH10701-PA 1..387 1..388 419 33.7 Plus
Dgri\GH10700-PA 342 GH10700-PA 126..328 197..386 242 33.7 Plus
Dgri\GH11037-PA 480 GH11037-PA 320..469 252..387 231 35.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:14:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG14011-PC 388 CG14011-PC 1..388 1..388 1997 100 Plus
CG14011-PB 388 CG14011-PB 1..388 1..388 1997 100 Plus
CG14011-PA 388 CG14011-PA 1..388 1..388 1997 100 Plus
CG18266-PA 486 CG18266-PA 221..475 139..388 333 31.2 Plus
CG7251-PB 321 CG7251-PB 21..313 150..387 290 30.2 Plus
CG7251-PA 321 CG7251-PA 21..313 150..387 290 30.2 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 12:25:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI11257-PA 391 GI11257-PA 1..382 1..388 496 38 Plus
Dmoj\GI11252-PA 328 GI11252-PA 113..314 194..386 282 37.2 Plus
Dmoj\GI17555-PA 515 GI17555-PA 309..504 212..387 271 37.1 Plus
Dmoj\GI16084-PA 1516 GI16084-PA 1117..1271 233..386 185 34.8 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 12:25:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL26646-PA 362 GL26646-PA 1..362 1..388 539 38.7 Plus
Dper\GL26645-PA 622 GL26645-PA 446..621 230..387 221 30.1 Plus
Dper\GL14937-PA 521 GL14937-PA 353..520 212..387 219 29.1 Plus
Dper\GL26370-PA 477 GL26370-PA 230..464 150..386 217 34.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 12:25:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA12696-PA 362 GA12696-PA 1..362 1..388 563 38.5 Plus
Dpse\GA22206-PA 510 GA22206-PA 334..509 230..387 230 29.5 Plus
Dpse\GA14863-PA 477 GA14863-PA 230..464 150..386 221 34.7 Plus
Dpse\GA29002-PA 611 GA29002-PA 435..610 230..387 220 30.1 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 12:25:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM18011-PA 385 GM18011-PA 1..385 1..388 1791 93.6 Plus
Dsec\GM18563-PA 477 GM18563-PA 222..465 139..387 254 30.3 Plus
Dsec\GM18010-PA 322 GM18010-PA 82..314 194..387 247 33.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 12:25:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD22644-PA 405 GD22644-PA 1..285 1..286 1222 93 Plus
Dsim\GD23354-PA 485 GD23354-PA 222..473 139..387 280 32.6 Plus
Dsim\GD22643-PA 321 GD22643-PA 81..313 194..387 247 33.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 12:25:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ12378-PA 403 GJ12378-PA 1..396 1..388 542 39 Plus
Dvir\GJ12367-PA 342 GJ12367-PA 119..332 186..386 287 38.2 Plus
Dvir\GJ15552-PA 537 GJ15552-PA 289..526 168..387 282 34.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 12:25:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK14686-PA 385 GK14686-PA 1..385 1..388 591 40.9 Plus
Dwil\GK15429-PA 332 GK15429-PA 3..320 72..386 310 30.6 Plus
Dwil\GK14687-PA 499 GK14687-PA 273..488 194..387 294 35.8 Plus
Dwil\GK18131-PA 512 GK18131-PA 44..201 243..386 184 34.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 12:25:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE18990-PA 386 GE18990-PA 1..386 1..388 1592 84.6 Plus
Dyak\GE25537-PA 508 GE25537-PA 241..496 140..387 249 33.5 Plus
Dyak\GE18989-PA 317 GE18989-PA 84..309 197..387 225 31.6 Plus

FI21938.hyp Sequence

Translation from 170 to 1336

> FI21938.hyp
MAFLGKVNSQGTLIDHELFCMTQPSQQDSDGQAREMGARVLLPRRKGSRT
FIKTCDKDSLVRSMGSPSTVRYVGSSESSSEVNSLDETETSTLRCCSDLS
LGTLKSTKTIEGPRVGELGEDIELQTESETVCLHLGSPSSSTSTDRSSCS
SRSCPSSRSGNNSSDKDSTTSMCSWEEAMSRDDSMLAPLELPLSHSLPSL
RLGSSVGSPPLTYTRRIEPLHIRRSAGEAYENWLSGKQRQCQYKLQAQQA
EREAQRQRTELRQRLAKEKYEQWCQQKAQQTTSTAKLTKPDRSAQLPPQK
NMASVQHHLQEWELHKLRLLEQRRLEQRNAERRRQEEKAARRSQAEEAFS
RWMSNVAQRPKPVPSSQGMKSLRGTVSDIFINPKQWVN*

FI21938.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:58:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG14011-PC 388 CG14011-PC 1..388 1..388 1997 100 Plus
CG14011-PB 388 CG14011-PB 1..388 1..388 1997 100 Plus
CG14011-PA 388 CG14011-PA 1..388 1..388 1997 100 Plus
CG18266-PA 486 CG18266-PA 221..475 139..388 333 31.2 Plus
CG7251-PB 321 CG7251-PB 21..313 150..387 290 30.2 Plus