Clone FI21952 Report

Search the DGRC for FI21952

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:219
Well:52
Vector:pOTB7
Associated Gene/TranscripteIF4E-5-RA
Protein status:FI21952.pep: gold
Sequenced Size:1036

Clone Sequence Records

FI21952.complete Sequence

1036 bp assembled on 2013-07-18

GenBank Submission: BT150183.1

> FI21952.complete
GTTTCGTTTAGGTCTAGAAAAATGTGCTAAAGTATTTTTGGTTATTAGTA
AGCAATTCCCACTCGAATCGCGACAAAATTCGTTGAGAACACAGCCGTCA
GCAAATAAATTAAGGTTACCTGTTCGTATCGGAAAAAAAAACAAGTCAAC
CAACAACATGGCCAGTGCACAAGTGCAAAGTTTTGATATTATGAAGCAGC
AGGATCAGCAACATCAGCTGAACAGTATCCATAAGCATCATCATCACCAC
GAAGGTGTTCCACTGGAGAGCAATAGCCCAGAACCTATCGATGAAGAGAT
ATACCAAGTCGAGTACAAGCATCCTTTGGAGCATGTGTGGACTTTGTGGT
ATTTGGAAAACGATCGCACCAAGCACTGGAAGGACATGCTAAACGAGATT
ACCGAGATTGACAGTGTGGAGACCTTCTGGAGCTTGTACCATACAATCAA
GACCCCAGCCGAGCTGAAGATTGGATGCGATTACTCCGTGTTCAAGAAGG
GCATAAAACCCATGTGGGAGGATGAAGCCAACATCAAGGGTGGTCGCTGG
CTGGTCACCGTGAGTAAGAGTGCCAAGGCGGAATTGGATCAAATTTGGCT
GGACATTCTACTGCTGATGGTGGGCCAAAATTTTGAATACTCCGACGAGA
TCTGCGGAGCTGTCATCAATATACGTAACAAGAGCAACAAAATCTCGGTT
TGGACTGCCAACGGGAGTAACGAAATGGCCATTCTGGAGATCGGCCAGAA
GCTGAAGATACTCCTTCATTTGCAATCGCATAGTTTGCAGTATCAACTTC
ATTCCGATGCAATGTCCAAATTCAATTCGGGCGTCAAATCGGTTTATACA
CTCTGAAAGCGATTGTTTAGGTCCTCTACGTTAGTATATTTTTATTTTTG
TACACCAGATTCGTAAGTGTGGAAGATATGATTGGCTTGGTGTATATGAA
TATTTACTTGGAATTGCCCCTACAAAATTGTTCTATAGACTAAATTAAAA
ACCTAATTTTCTATGCGCAAAAAAAAAAAAAAAAAA

FI21952.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 11:21:44
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 7886997..7887506 1..507 2410 98.6 Plus
chr3L 24539361 chr3L 7887808..7888130 696..1018 1615 100 Plus
chr3L 24539361 chr3L 7887567..7887754 508..695 925 99.5 Plus
chrX 22417052 chrX 1053063..1053194 577..446 240 78.8 Minus
chr3L 24539361 chr3L 8221627..8221689 317..379 195 87.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 11:21:42
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 7894880..7895388 1..507 2420 98.8 Plus
3L 28110227 3L 7895687..7896011 696..1020 1625 100 Plus
3L 28110227 3L 7895446..7895633 508..695 925 99.5 Plus
X 23542271 X 1159098..1159229 577..446 240 78.8 Minus
Blast to na_te.dros performed on 2019-03-15 11:21:42 has no hits.

FI21952.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 11:22:34 Download gff for FI21952.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 7886997..7887506 1..507 98 -> Plus
chr3L 7887567..7887754 508..695 99 -> Plus
chr3L 7887808..7888130 696..1018 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2013-07-18 13:19:01 Download gff for FI21952.complete
Subject Subject Range Query Range Percent Splice Strand
eIF4E-5-RA 1..699 158..856 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:27:23 Download gff for FI21952.complete
Subject Subject Range Query Range Percent Splice Strand
eIF4E-5-RA 1..699 158..856 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:30:53 Download gff for FI21952.complete
Subject Subject Range Query Range Percent Splice Strand
eIF4E-5-RA 1..699 158..856 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-07-18 13:19:01 Download gff for FI21952.complete
Subject Subject Range Query Range Percent Splice Strand
eIF4E-5-RA 1..1020 1..1018 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:27:23 Download gff for FI21952.complete
Subject Subject Range Query Range Percent Splice Strand
eIF4E-5-RA 1..1020 1..1018 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:30:53 Download gff for FI21952.complete
Subject Subject Range Query Range Percent Splice Strand
eIF4E-5-RA 1..1020 1..1018 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:22:34 Download gff for FI21952.complete
Subject Subject Range Query Range Percent Splice Strand
3L 7895446..7895633 508..695 99 -> Plus
3L 7895687..7896009 696..1018 100   Plus
3L 7894880..7895388 1..507 98 -> Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:22:34 Download gff for FI21952.complete
Subject Subject Range Query Range Percent Splice Strand
3L 7895446..7895633 508..695 99 -> Plus
3L 7895687..7896009 696..1018 100   Plus
3L 7894880..7895388 1..507 98 -> Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:22:34 Download gff for FI21952.complete
Subject Subject Range Query Range Percent Splice Strand
3L 7895446..7895633 508..695 99 -> Plus
3L 7895687..7896009 696..1018 100   Plus
3L 7894880..7895388 1..507 98 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:27:23 Download gff for FI21952.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 7887980..7888488 1..507 98 -> Plus
arm_3L 7888546..7888733 508..695 99 -> Plus
arm_3L 7888787..7889109 696..1018 100   Plus

FI21952.pep Sequence

Translation from 1 to 855

> FI21952.pep
FRLGLEKCAKVFLVISKQFPLESRQNSLRTQPSANKLRLPVRIGKKNKST
NNMASAQVQSFDIMKQQDQQHQLNSIHKHHHHHEGVPLESNSPEPIDEEI
YQVEYKHPLEHVWTLWYLENDRTKHWKDMLNEITEIDSVETFWSLYHTIK
TPAELKIGCDYSVFKKGIKPMWEDEANIKGGRWLVTVSKSAKAELDQIWL
DILLLMVGQNFEYSDEICGAVINIRNKSNKISVWTANGSNEMAILEIGQK
LKILLHLQSHSLQYQLHSDAMSKFNSGVKSVYTL*

FI21952.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 12:25:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF10327-PA 271 GF10327-PA 82..271 96..284 896 86.8 Plus
Dana\GF10894-PA 230 GF10894-PA 44..230 98..284 681 63.1 Plus
Dana\GF23736-PA 261 GF23736-PA 59..261 84..284 674 59.1 Plus
Dana\GF22031-PA 458 GF22031-PA 260..458 86..284 645 58.2 Plus
Dana\GF25106-PA 244 GF25106-PA 61..244 101..284 542 50 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 12:25:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG14453-PA 231 GG14453-PA 1..231 53..284 1007 83.2 Plus
Dere\GG15032-PA 229 GG15032-PA 44..229 99..284 666 61.3 Plus
Dere\GG14044-PA 250 GG14044-PA 53..250 90..284 664 59.6 Plus
Dere\GG12718-PA 448 GG12718-PA 260..448 97..284 610 56.1 Plus
Dere\GG14292-PA 244 GG14292-PA 61..244 101..284 541 50.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 12:25:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH14978-PA 232 GH14978-PA 1..232 53..284 828 66.1 Plus
Dgri\GH15637-PA 233 GH15637-PA 39..233 86..284 666 59.8 Plus
Dgri\GH16860-PA 275 GH16860-PA 95..275 105..284 656 63.5 Plus
Dgri\GH12729-PA 300 GH12729-PA 98..300 85..284 600 53.7 Plus
Dgri\GH24331-PA 222 GH24331-PA 31..222 86..284 528 47.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:21:01
Subject Length Description Subject Range Query Range Score Percent Strand
eIF4E5-PA 232 CG8277-PA 1..232 53..284 1241 100 Plus
eIF4E4-PA 229 CG10124-PA 44..227 99..282 666 62 Plus
eIF4E1-PC 248 CG4035-PC 25..248 54..284 665 53.8 Plus
eIF4E1-PI 259 CG4035-PI 36..259 54..284 665 53.8 Plus
eIF4E1-PH 259 CG4035-PH 36..259 54..284 665 53.8 Plus
eIF4E1-PD 259 CG4035-PD 36..259 54..284 665 53.8 Plus
eIF4E1-PB 259 CG4035-PB 36..259 54..284 665 53.8 Plus
eIF4E1-PF 259 CG4035-PF 36..259 54..284 665 53.8 Plus
eIF4E1-PE 259 CG4035-PE 36..259 54..284 665 53.8 Plus
eIF4E1-PG 259 CG4035-PG 36..259 54..284 665 53.8 Plus
eIF4E1-PA 259 CG4035-PA 36..259 54..284 665 53.8 Plus
eIF4E7-PA 429 CG32859-PA 242..429 99..284 579 53.2 Plus
eIF4E3-PA 244 CG8023-PA 35..244 83..284 576 48.1 Plus
eIF4E6-PC 173 CG1442-PC 32..161 106..235 401 53.8 Plus
eIF4E6-PB 173 CG1442-PB 32..161 106..235 401 53.8 Plus
eIF4E6-PA 173 CG1442-PA 32..161 106..235 401 53.8 Plus
eIF4EHP-PA 223 CG33100-PA 48..211 109..271 262 31.7 Plus
eIF4EHP-PD 242 CG33100-PD 48..211 109..271 262 31.7 Plus
eIF4EHP-PB 248 CG33100-PB 48..172 109..233 220 35.2 Plus
eIF4EHP-PC 186 CG33100-PC 48..164 109..225 216 35.8 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 12:25:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI13141-PA 238 GI13141-PA 1..238 53..284 866 67.6 Plus
Dmoj\GI12684-PA 246 GI12684-PA 65..246 103..284 662 63.2 Plus
Dmoj\GI14982-PA 311 GI14982-PA 124..310 98..283 613 57.8 Plus
Dmoj\GI13083-PA 125 GI13083-PA 43..125 203..284 255 61.4 Plus
Dmoj\GI16776-PA 198 GI16776-PA 94..162 101..169 234 55.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 12:25:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL12850-PA 198 GL12850-PA 6..198 93..284 657 61.1 Plus
Dper\GL13241-PA 223 GL13241-PA 27..223 85..284 617 55 Plus
Dper\GL26506-PA 219 GL26506-PA 36..219 101..284 528 50 Plus
Dper\GL14400-PA 233 GL14400-PA 54..233 106..284 510 50.6 Plus
Dper\GL18042-PA 204 GL18042-PA 49..204 106..284 485 50.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 12:25:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA28380-PA 227 GA28380-PA 49..227 106..284 771 76 Plus
Dpse\GA28658-PA 263 GA28658-PA 83..263 105..284 660 64.1 Plus
Dpse\GA28599-PA 223 GA28599-PA 27..223 85..284 610 54.5 Plus
Dpse\GA24628-PA 234 GA24628-PA 56..234 106..284 570 55.3 Plus
Dpse\GA28966-PA 219 GA28966-PA 36..219 101..284 528 50 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 12:25:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM25004-PA 233 GM25004-PA 1..233 53..284 1094 91 Plus
Dsec\GM24878-PA 269 GM24878-PA 77..269 95..284 671 62.7 Plus
Dsec\GM13832-PA 229 GM13832-PA 44..229 99..284 660 61.3 Plus
Dsec\GM18997-PA 422 GM18997-PA 241..422 104..284 568 52.2 Plus
Dsec\GM25034-PA 244 GM25034-PA 61..244 101..284 557 52.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 12:25:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD14038-PA 233 GD14038-PA 1..233 53..284 1083 89.3 Plus
Dsim\GD12928-PA 269 GD12928-PA 77..269 95..284 672 62.7 Plus
Dsim\GD13118-PA 229 GD13118-PA 44..229 99..284 659 61.3 Plus
Dsim\GD14067-PA 244 GD14067-PA 61..244 101..284 560 52.7 Plus
Dsim\GD16435-PA 420 GD16435-PA 246..389 104..247 500 55.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 12:25:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13889-PA 238 GJ13889-PA 1..238 53..284 877 67.6 Plus
Dvir\GJ12668-PA 230 GJ12668-PA 40..230 94..284 672 60.7 Plus
Dvir\GJ13832-PA 272 GJ13832-PA 92..272 105..284 660 64.1 Plus
Dvir\GJ19475-PA 323 GJ19475-PA 144..323 106..284 634 63.3 Plus
Dvir\GJ16331-PA 301 GJ16331-PA 113..300 97..283 611 57.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 12:25:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK17737-PA 217 GK17737-PA 34..217 101..284 852 81.5 Plus
Dwil\GK14373-PA 235 GK14373-PA 57..235 106..284 684 65.9 Plus
Dwil\GK20927-PA 266 GK20927-PA 86..266 105..284 669 64.6 Plus
Dwil\GK12583-PA 280 GK12583-PA 54..235 103..284 669 63.2 Plus
Dwil\GK25580-PA 300 GK25580-PA 68..300 44..284 639 51.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 12:25:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE21642-PA 231 GE21642-PA 1..231 53..284 1087 87.9 Plus
Dyak\GE21247-PA 269 GE21247-PA 69..269 85..284 668 60.2 Plus
Dyak\GE20475-PA 229 GE20475-PA 44..229 99..284 666 61.3 Plus
Dyak\GE16544-PA 448 GE16544-PA 260..448 97..284 613 55.6 Plus
Dyak\GE20721-PA 244 GE20721-PA 35..244 83..284 557 47.6 Plus

FI21952.hyp Sequence

Translation from 157 to 855

> FI21952.hyp
MASAQVQSFDIMKQQDQQHQLNSIHKHHHHHEGVPLESNSPEPIDEEIYQ
VEYKHPLEHVWTLWYLENDRTKHWKDMLNEITEIDSVETFWSLYHTIKTP
AELKIGCDYSVFKKGIKPMWEDEANIKGGRWLVTVSKSAKAELDQIWLDI
LLLMVGQNFEYSDEICGAVINIRNKSNKISVWTANGSNEMAILEIGQKLK
ILLHLQSHSLQYQLHSDAMSKFNSGVKSVYTL*

FI21952.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:59:38
Subject Length Description Subject Range Query Range Score Percent Strand
eIF4E-5-PA 232 CG8277-PA 1..232 1..232 1241 100 Plus
eIF4E-4-PA 229 CG10124-PA 44..227 47..230 666 62 Plus
eIF-4E-PC 248 CG4035-PC 25..248 2..232 665 53.8 Plus
eIF-4E-PI 259 CG4035-PI 36..259 2..232 665 53.8 Plus
eIF-4E-PH 259 CG4035-PH 36..259 2..232 665 53.8 Plus