Clone FI22022 Report

Search the DGRC for FI22022

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:220
Well:22
Vector:pOT2|pOTB7_DraIII
Associated Gene/TranscriptDh44-RA
Protein status:FI22022.pep: gold
Sequenced Size:1433

Clone Sequence Records

FI22022.complete Sequence

1433 bp assembled on 2013-07-18

GenBank Submission: BT150180.1

> FI22022.complete
CTAATATCTACCAATTTATAGAACGCTCTGAATGATGAAAGCCACAGCGT
GGTTTTGTCCGGTGTTATTAACTTTACTGTGTGCCACAAGGCTCGTCTGC
ACGGCCCAAAGAGGAGCAGTTGGAGCAGGAGGAGCTGCAGGAGGATCGGG
AGCGGCAGCGGGTGGAGCGGAGGTCGGCGGAAGCGGCCGCACAAACGGAT
ATCCTCTGGACTACCCGGATGGAACACGGAACTCACAGGATGACTTTCTG
CTGGCCAAGAGGAACAAACCGTCGCTGTCCATTGTCAATCCGCTGGATGT
GCTGCGCCAGCGGCTGCTCCTGGAAATCGCACGCAGGCAAATGAAGGAGA
ACTCCCGCCAGGTCGAACTGAATCGCGCCATCCTGAAGAACGTGGGCAAG
AGGGTCGTGCTGCGAGGAGGAGGAGGAGGCGGAGGATCGGGAGCAGGAGG
ATTGGCTCCCAAGGTGAGCAGGCGCTACCGCCAGCAGTGGCCAGTGGAGC
GGGAACTGGAGCGGGAAAGGCAGAGGGAGAGGGAAAGGGAAAGGGATGCA
GTTCGTGAGGAGCAGCTGGACCGTCAACAGCTGCTGCCGTGGAAGCATTT
CCCCAGCCAACTGTGGAGCTACGGATGGGCCCTGTCGCCGTACAAGGAGT
CGTCACAGTTACAGTTTGCGGACTCCCAGCAATCAGCATCGACTGGACCA
CAATCCCAGGCACTCCCAAAGCAGTTGCAGTTGCTCAGCTATGCGAAGAA
ACCACTGGACGTGGCCGGAATGAGTCTGGCCAGGCATCGGGTCAGCGGAA
ATGAAGCCAACGAAACGAATCATGAGAACGACGATGGCAATGGGGCCAGT
AAAAACCCGGCGAGATATGTGGATGACGGCGACAATGAGGGCGAGGATAG
CTACAATGACGTGGGAACAGAAGGTGTGGGACTCGGCCTGGGAATGGGTG
TGGGATTGGGTCTGGAACGGTTCGAGGTGCTGGAGGACAAGCCCAACTGG
GCCAATGAGGAACCAAACGAGTTGGTGGTGGTTAATGCAAATGACCGCGT
GCCCTGGTCCTTTCCCTACCGCTTTCACAAAAGTCAGCATAACGTTAATT
AATTACAGATATATGTAATACCGACACACATACCGATACCGATACCGAAA
CGGATACGATGCGATAGGGGCACCCAACGGCTTCTGAGTGCTGGAAGGTT
ATTAATGCAAATCGACGGTTCCTAATGGCTGGCTACAAGGCAGGCATGTT
GTGTGTGCACATACTCCCTTGATGACAAACTTACTCCCACGTTGCTAGAT
GTACTCGCATTTGAACTCTATTTTATCGAAAATAACCAACGGTGTATGTA
ACGATTTATGCTACCTCTCTCACAGATACTGTTGAAAATAAAGTCCCCGA
TTAATGTGAAACAAAAAAAAAAAAAAAAAAAAA

FI22022.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 11:21:30
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 5474814..5475561 358..1102 3615 99.2 Plus
chr3R 27901430 chr3R 5475640..5475948 1104..1412 1515 99.4 Plus
chr3R 27901430 chr3R 5469297..5469506 30..239 1050 100 Plus
chr3R 27901430 chr3R 5472830..5472957 237..364 610 98.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 11:21:28
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 9648979..9649723 358..1102 3725 100 Plus
3R 32079331 3R 9649801..9650111 1103..1413 1540 99.7 Plus
3R 32079331 3R 9643490..9643699 30..239 1050 100 Plus
3R 32079331 3R 9647017..9647144 237..364 610 98.4 Plus
Blast to na_te.dros performed on 2019-03-15 11:21:29 has no hits.

FI22022.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 11:22:26 Download gff for FI22022.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 5463996..5464025 1..30 100 -> Plus
chr3R 5469298..5469505 31..238 100 -> Plus
chr3R 5472832..5472954 239..361 98 -> Plus
chr3R 5474818..5475561 362..1102 89 == Plus
chr3R 5475682..5475948 1146..1412 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2013-07-18 09:46:00 Download gff for FI22022.complete
Subject Subject Range Query Range Percent Splice Strand
Dh-RB 197..1272 26..1102 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:27:14 Download gff for FI22022.complete
Subject Subject Range Query Range Percent Splice Strand
Dh44-RB 197..1272 26..1102 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:30:35 Download gff for FI22022.complete
Subject Subject Range Query Range Percent Splice Strand
Dh44-RA 1..1071 32..1102 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-07-18 09:46:00 Download gff for FI22022.complete
Subject Subject Range Query Range Percent Splice Strand
Dh-RA 1..1102 1..1102 99 -> Plus
Dh-RA 1180..1489 1103..1412 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:27:14 Download gff for FI22022.complete
Subject Subject Range Query Range Percent Splice Strand
Dh44-RA 1..1412 1..1412 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:30:35 Download gff for FI22022.complete
Subject Subject Range Query Range Percent Splice Strand
Dh44-RA 1..1412 1..1412 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:22:26 Download gff for FI22022.complete
Subject Subject Range Query Range Percent Splice Strand
3R 9643491..9643698 31..238 100 -> Plus
3R 9647019..9647141 239..361 98 -> Plus
3R 9638182..9638211 1..30 100 -> Plus
3R 9648983..9649723 362..1102 100 -> Plus
3R 9649801..9650110 1103..1412 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:22:26 Download gff for FI22022.complete
Subject Subject Range Query Range Percent Splice Strand
3R 9643491..9643698 31..238 100 -> Plus
3R 9647019..9647141 239..361 98 -> Plus
3R 9638182..9638211 1..30 100 -> Plus
3R 9648983..9649723 362..1102 100 -> Plus
3R 9649801..9650110 1103..1412 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:22:26 Download gff for FI22022.complete
Subject Subject Range Query Range Percent Splice Strand
3R 9643491..9643698 31..238 100 -> Plus
3R 9647019..9647141 239..361 98 -> Plus
3R 9638182..9638211 1..30 100 -> Plus
3R 9648983..9649723 362..1102 100 -> Plus
3R 9649801..9650110 1103..1412 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:27:14 Download gff for FI22022.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 5463904..5463933 1..30 100 -> Plus
arm_3R 5469213..5469420 31..238 100 -> Plus
arm_3R 5472741..5472863 239..361 98 -> Plus
arm_3R 5474705..5475445 362..1102 100 -> Plus
arm_3R 5475523..5475832 1103..1412 99   Plus

FI22022.hyp Sequence

Translation from 31 to 1101

> FI22022.hyp
MMKATAWFCPVLLTLLCATRLVCTAQRGAVGAGGAAGGSGAAAGGAEVGG
SGRTNGYPLDYPDGTRNSQDDFLLAKRNKPSLSIVNPLDVLRQRLLLEIA
RRQMKENSRQVELNRAILKNVGKRVVLRGGGGGGGSGAGGLAPKVSRRYR
QQWPVERELERERQRERERERDAVREEQLDRQQLLPWKHFPSQLWSYGWA
LSPYKESSQLQFADSQQSASTGPQSQALPKQLQLLSYAKKPLDVAGMSLA
RHRVSGNEANETNHENDDGNGASKNPARYVDDGDNEGEDSYNDVGTEGVG
LGLGMGVGLGLERFEVLEDKPNWANEEPNELVVVNANDRVPWSFPYRFHK
SQHNVN*

FI22022.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:59:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dh44-PC 356 CG8348-PC 1..356 1..356 1872 100 Plus
Dh44-PA 356 CG8348-PA 1..356 1..356 1872 100 Plus

FI22022.pep Sequence

Translation from 31 to 1101

> FI22022.pep
MMKATAWFCPVLLTLLCATRLVCTAQRGAVGAGGAAGGSGAAAGGAEVGG
SGRTNGYPLDYPDGTRNSQDDFLLAKRNKPSLSIVNPLDVLRQRLLLEIA
RRQMKENSRQVELNRAILKNVGKRVVLRGGGGGGGSGAGGLAPKVSRRYR
QQWPVERELERERQRERERERDAVREEQLDRQQLLPWKHFPSQLWSYGWA
LSPYKESSQLQFADSQQSASTGPQSQALPKQLQLLSYAKKPLDVAGMSLA
RHRVSGNEANETNHENDDGNGASKNPARYVDDGDNEGEDSYNDVGTEGVG
LGLGMGVGLGLERFEVLEDKPNWANEEPNELVVVNANDRVPWSFPYRFHK
SQHNVN*

FI22022.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 12:25:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF16610-PA 319 GF16610-PA 1..299 1..292 695 62.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 12:25:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG16993-PA 353 GG16993-PA 1..353 1..356 1359 88.1 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 12:25:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH18271-PA 353 GH18271-PA 1..353 1..356 463 40.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:05:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dh44-PC 356 CG8348-PC 1..356 1..356 1872 100 Plus
Dh44-PA 356 CG8348-PA 1..356 1..356 1872 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 12:25:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI24078-PA 299 GI24078-PA 1..299 1..356 473 43.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 12:25:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL12380-PA 307 GL12380-PA 1..305 1..356 591 48.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 12:25:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA27488-PA 307 GA27488-PA 1..297 1..348 596 47.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 12:25:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM23824-PA 352 GM23824-PA 1..352 1..356 1780 96.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 12:25:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD18635-PA 354 GD18635-PA 1..354 1..356 1805 97.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 12:25:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ10898-PA 332 GJ10898-PA 1..332 1..356 502 41.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 12:25:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK11103-PA 303 GK11103-PA 1..303 1..356 477 40.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 12:25:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE25971-PA 360 GE25971-PA 1..360 1..356 1257 82.8 Plus