Clone FI22027 Report

Search the DGRC for FI22027

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:220
Well:27
Vector:pOT2|pOTB7_DraIII
Associated Gene/TranscriptCG14154-RB
Protein status:FI22027.pep: gold
Sequenced Size:910

Clone Sequence Records

FI22027.complete Sequence

910 bp assembled on 2013-07-18

GenBank Submission: BT150185.1

> FI22027.complete
AAAATATTTACAAACGAGACATGAAAGGAAACAGACAGAAGACCTTCGTC
GTGGAGGATTCCGAATCGCAGAAGCCCGAAAAGAATCCGAGTCCTGAGCG
CAAGGAGGATCGCAAGGAGCGCAGGAGGGAGGAGGAAATGGAACGCAAGC
GGGAACTGGAGCGGCGAAAGGAACTCGCGAGGGAAAAGGAACGAGAGAAA
AAGCAGCATCAGCAGGAGTGGCGCAAGGAACTGGAGAAGGAACGTCAGCG
TGAAAAGGAATTGCAGCGTGAACATCTGAGGAAGGAGCCATCCACTTCCT
CCAAAAGGGTAAATCCAGAAATCACTAAATTCGACGAGGAATTCGAGCAG
GATATTCAGAAGTTGGAGCAAAGTATTTGCCAACTGGACTTTCGCTCCAA
AACGATGGCCACCATGTGGATGGACAAGCTGCGCCAACCACCACAAAATG
CAGACGAGGCCAGATCTAGGAACATAATAACATCCCATCTGCTCAAGTGC
TGTGGCGATAACATATTCAATAAGGAGCCATTCAATCATCCTCCGCCACC
ACAAAATTTGACAACCATAAGGGAGATGATGTTCTTAACGCGCGATAGTA
CGTGCCACGGAATGCCCATTTCCAAGCAGATGGAACCCAACGCCAATCTA
ACCCAATTATTTAGCGATTCATACGATGGTGGCGAGTTCCTGAGAAAGCT
ACCAGTGCCACGTGATGGGGCATTCTTTATCTATTACATGCAACCAAATT
TGTAGAAGTGAATTGGATTTTAAAGTAACGCCAGCTAAATTTCAAACATA
AGTCTTCAATTTGTATTTTTTATACAAAATGTTAGTAAGAAAACGTTGAT
ACCCTTTACTATAATAAAGCAAGCTCGAATTGTTTCTAAAAAAAAAAAAA
AAAAAAAAAA

FI22027.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 11:21:25
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 10633438..10633991 28..581 2740 99.6 Plus
chr3L 24539361 chr3L 10634090..10634396 581..887 1505 99.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 11:21:23
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 10642048..10642601 28..581 2710 99.3 Plus
3L 28110227 3L 10642703..10643011 581..889 1530 99.7 Plus
Blast to na_te.dros performed 2019-03-15 11:21:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2301..2426 135..260 117 54.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6799..6944 128..273 109 52.7 Plus

FI22027.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 11:22:22 Download gff for FI22027.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 10633344..10633371 1..28 100 -> Plus
chr3L 10633439..10633991 29..581 99 -> Plus
chr3L 10634091..10634396 582..887 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2013-07-18 09:17:35 Download gff for FI22027.complete
Subject Subject Range Query Range Percent Splice Strand
CG14154-RB 1..735 21..755 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:27:10 Download gff for FI22027.complete
Subject Subject Range Query Range Percent Splice Strand
CG14154-RB 1..735 21..755 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:30:27 Download gff for FI22027.complete
Subject Subject Range Query Range Percent Splice Strand
CG14154-RB 1..735 21..755 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-07-18 09:17:35 Download gff for FI22027.complete
Subject Subject Range Query Range Percent Splice Strand
CG14154-RB 39..830 1..792 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:27:10 Download gff for FI22027.complete
Subject Subject Range Query Range Percent Splice Strand
CG14154-RB 66..952 1..887 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:30:27 Download gff for FI22027.complete
Subject Subject Range Query Range Percent Splice Strand
CG14154-RB 66..952 1..887 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:22:22 Download gff for FI22027.complete
Subject Subject Range Query Range Percent Splice Strand
3L 10641954..10641981 1..28 100 -> Plus
3L 10642049..10642601 29..581 99 -> Plus
3L 10642704..10643009 582..887 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:22:22 Download gff for FI22027.complete
Subject Subject Range Query Range Percent Splice Strand
3L 10641954..10641981 1..28 100 -> Plus
3L 10642049..10642601 29..581 99 -> Plus
3L 10642704..10643009 582..887 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:22:22 Download gff for FI22027.complete
Subject Subject Range Query Range Percent Splice Strand
3L 10641954..10641981 1..28 100 -> Plus
3L 10642049..10642601 29..581 99 -> Plus
3L 10642704..10643009 582..887 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:27:10 Download gff for FI22027.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 10635054..10635081 1..28 100 -> Plus
arm_3L 10635149..10635701 29..581 99 -> Plus
arm_3L 10635804..10636109 582..887 99   Plus

FI22027.pep Sequence

Translation from 2 to 754

> FI22027.pep
NIYKRDMKGNRQKTFVVEDSESQKPEKNPSPERKEDRKERRREEEMERKR
ELERRKELAREKEREKKQHQQEWRKELEKERQREKELQREHLRKEPSTSS
KRVNPEITKFDEEFEQDIQKLEQSICQLDFRSKTMATMWMDKLRQPPQNA
DEARSRNIITSHLLKCCGDNIFNKEPFNHPPPPQNLTTIREMMFLTRDST
CHGMPISKQMEPNANLTQLFSDSYDGGEFLRKLPVPRDGAFFIYYMQPNL
*

FI22027.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 12:24:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF10601-PA 232 GF10601-PA 13..232 30..249 523 47.1 Plus
Dana\GF10602-PA 358 GF10602-PA 15..190 47..228 274 37.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 12:24:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG15444-PA 252 GG15444-PA 4..252 5..250 1071 81.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:27:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG14154-PB 244 CG14154-PB 1..244 7..250 1294 100 Plus
CG14154-PA 249 CG14154-PA 4..249 5..250 1281 98.4 Plus
CG2839-PA 826 CG2839-PA 273..425 6..156 173 31 Plus
CG2839-PA 826 CG2839-PA 610..753 4..137 163 31.9 Plus
CG2839-PA 826 CG2839-PA 335..476 4..156 160 29.4 Plus
CG2839-PA 826 CG2839-PA 418..575 4..156 153 25.9 Plus
CG2839-PA 826 CG2839-PA 534..689 4..156 150 29.4 Plus
CG2839-PA 826 CG2839-PA 307..459 4..156 149 26.9 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 12:24:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI21397-PA 184 GI21397-PA 53..184 106..250 267 37.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 12:24:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL16042-PA 115 GL16042-PA 35..114 169..249 171 39.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 12:24:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM25219-PA 252 GM25219-PA 4..252 5..250 1110 88.4 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 12:24:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD14252-PA 251 GD14252-PA 4..251 5..250 1014 80.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 12:24:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE21755-PA 252 GE21755-PA 9..252 10..250 1043 81.1 Plus

FI22027.hyp Sequence

Translation from 2 to 754

> FI22027.hyp
NIYKRDMKGNRQKTFVVEDSESQKPEKNPSPERKEDRKERRREEEMERKR
ELERRKELAREKEREKKQHQQEWRKELEKERQREKELQREHLRKEPSTSS
KRVNPEITKFDEEFEQDIQKLEQSICQLDFRSKTMATMWMDKLRQPPQNA
DEARSRNIITSHLLKCCGDNIFNKEPFNHPPPPQNLTTIREMMFLTRDST
CHGMPISKQMEPNANLTQLFSDSYDGGEFLRKLPVPRDGAFFIYYMQPNL
*

FI22027.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:59:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG14154-PB 244 CG14154-PB 1..244 7..250 1294 100 Plus
CG14154-PA 249 CG14154-PA 4..249 5..250 1281 98.4 Plus
CG2839-PA 826 CG2839-PA 273..425 6..156 173 31 Plus
CG2839-PA 826 CG2839-PA 610..753 4..137 163 31.9 Plus
CG2839-PA 826 CG2839-PA 335..476 4..156 160 29.4 Plus
CG2839-PA 826 CG2839-PA 418..575 4..156 153 25.9 Plus
CG2839-PA 826 CG2839-PA 534..689 4..156 150 29.4 Plus
CG2839-PA 826 CG2839-PA 307..459 4..156 149 26.9 Plus