Clone FI22161 Report

Search the DGRC for FI22161

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:221
Well:61
Vector:pOT2|pOTB7_DraIII
Associated Gene/TranscriptCG15262-RA
Protein status:FI22161.pep: gold
Sequenced Size:1578

Clone Sequence Records

FI22161.complete Sequence

1578 bp assembled on 2013-07-17

GenBank Submission: BT150175.1

> FI22161.complete
AATCAGGACTCTCTCAAATGTCATTTTGGCAAGCTATAGTATTGCAAACC
AAAGCGATCTCTGCCACACGTGTTTTTTCCTCGCAACGCTTATAAATTAC
GAGATAAGCTCTGAGTCTTATAGAAATCCAGAGTAAGATATGAAACGTCA
TTATTACAATACTGGGGATGACCAGCAGGAGGTGGAGAGCTCTCCAAGTC
CGCCGCCTCCTCCGCCTTTCCAATCGCCATTATCATCGCCCGAGTCTTTG
CAGACCCCGGATGGATATCCCATTTTGTACGTGGATGTGGTAAAGAATAA
GCCCAAACAGGAGTTGCCGCCGTCCGCATCACCGTCCCAACCACTTGCGC
CGGAGTTCAGCATCTTTCGCGAAGATTTTCCGGCTCTGCCAGGATCATTA
CCATCTGCATTACCAACCGCATTACCAACGACATCGAGCCCTGTGGTGCC
CGACGACTGGACAGCCATGATGAGCAACAGCGAGCAGGTCGAACTCGCCA
AATTTCGAAATACAGTTATCCGTAATTCCAGTGATCCGTGCGTTAACGCT
AACGGCAACGAGGTGCTCCGTCAGCCAACCCATGCTCCCGAGAAGCGCCA
GAATATGGAGTTGCTGCCCCATATGTACGGTTATCTCGGCAATCCGTTCC
GTTTAAATTTGAGCATGATATTTACCAAGCAATTCCTGCTCGAAGGCGTC
AGGCAGAGGGCCATAAATGCGGCCCACAAGAGGGCTGCCCTGGCAAAACC
AGCAATCCAACCACCACCCGGATTCGAGAATTGCAAAATTTTTGCCCGCT
TGATAACCAACAGTGATGGTATGCCACTGGGTGGAGTCACATTTGAGCTG
GGCTCACCCACTAATGAAACGACTTCGAATGTGGAGGCGAAACCTTCGGG
TTCCACCATTCAGGGAGCCTTTGGGATGTTGGGACTGGCCAAGAAACTGC
GATCGATTAATCAGAACCCGCTTCTATTCGGAAATAATGTTGCCCACAAT
ATAGGCGGAGCCGCGGACTCGATCTTTACCGGGCCAATTCAAGAAGCCCG
TTTGACTCCTCAGGAGATGAGCTACAAATTGCCATTGAACTATCTCTTCA
ATGTAAATATGAGCCTACAGGAGCCCAAAATCGAGGAAATGCATGATGAG
CTCCTATTTTTCTTCTTCTACACATATGCTGGCGACATGATGCAGATGCT
CGCGGCTGCTGAACTGGCGGAACGTGGATGGCGCTATCACAAGTATGAAC
ATTTCTGGGTCATTCGCCAGGCGGACAATCCCAACTACTTATATCACGGA
TTCCGGGAGTTCGGAGAGTACAATTACTTCAACATGTGGCAGTGGAAGAT
CCTGCCACGACACTTTTACCTGGATCCCGAGATCCTGGAGCGCACTCTAT
CCAAGGAAGAGCTGTATGTGACGTACGGATACCATCCCCAGATGTCGGGT
ATTTAGAAGAAAGTTCTTTTGTCATCAATAGCCAGGGATATTCGGGTTTA
AAAATTCTCTCTGACGCTGTAGCATCTTTTTTATAAGAACAAATTAAATT
TTTTATAAATAAAAAAAAAAAAAAAAAA

FI22161.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 14:35:00
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 15296590..15298149 1..1560 7770 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 14:34:58
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 15297808..15299368 1..1561 7760 99.8 Plus
Blast to na_te.dros performed 2019-03-15 14:34:58
Subject Length Description Subject Range Query Range Score Percent Strand
Stalker4 7359 Stalker4 STALKER4 7359bp 6429..6479 111..160 117 72.5 Plus
Stalker 7256 Stalker STALKER 7256bp 6323..6373 111..160 117 72.5 Plus

FI22161.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 14:35:51 Download gff for FI22161.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 15296590..15298110 1..1521 97 -> Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2013-07-17 09:08:27 Download gff for FI22161.complete
Subject Subject Range Query Range Percent Splice Strand
CG15262-RA 1..1317 140..1456 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 00:35:52 Download gff for FI22161.complete
Subject Subject Range Query Range Percent Splice Strand
CG15262-RA 1..1317 140..1456 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:03:43 Download gff for FI22161.complete
Subject Subject Range Query Range Percent Splice Strand
CG15262-RA 1..1317 140..1456 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-07-17 09:08:27 Download gff for FI22161.complete
Subject Subject Range Query Range Percent Splice Strand
CG15262-RA 1..1560 1..1560 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:35:52 Download gff for FI22161.complete
Subject Subject Range Query Range Percent Splice Strand
CG15262-RA 1..1560 1..1560 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:03:43 Download gff for FI22161.complete
Subject Subject Range Query Range Percent Splice Strand
CG15262-RA 1..1560 1..1560 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:35:51 Download gff for FI22161.complete
Subject Subject Range Query Range Percent Splice Strand
2L 15297808..15299367 1..1560 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:35:51 Download gff for FI22161.complete
Subject Subject Range Query Range Percent Splice Strand
2L 15297808..15299367 1..1560 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:35:51 Download gff for FI22161.complete
Subject Subject Range Query Range Percent Splice Strand
2L 15297808..15299367 1..1560 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:35:52 Download gff for FI22161.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 15297808..15299367 1..1560 99   Plus

FI22161.hyp Sequence

Translation from 139 to 1455

> FI22161.hyp
MKRHYYNTGDDQQEVESSPSPPPPPPFQSPLSSPESLQTPDGYPILYVDV
VKNKPKQELPPSASPSQPLAPEFSIFREDFPALPGSLPSALPTALPTTSS
PVVPDDWTAMMSNSEQVELAKFRNTVIRNSSDPCVNANGNEVLRQPTHAP
EKRQNMELLPHMYGYLGNPFRLNLSMIFTKQFLLEGVRQRAINAAHKRAA
LAKPAIQPPPGFENCKIFARLITNSDGMPLGGVTFELGSPTNETTSNVEA
KPSGSTIQGAFGMLGLAKKLRSINQNPLLFGNNVAHNIGGAADSIFTGPI
QEARLTPQEMSYKLPLNYLFNVNMSLQEPKIEEMHDELLFFFFYTYAGDM
MQMLAAAELAERGWRYHKYEHFWVIRQADNPNYLYHGFREFGEYNYFNMW
QWKILPRHFYLDPEILERTLSKEELYVTYGYHPQMSGI*

FI22161.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:57:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG15262-PA 438 CG15262-PA 1..438 1..438 2345 100 Plus
Rga-PC 579 CG2161-PC 352..566 223..418 276 31.2 Plus
Rga-PB 579 CG2161-PB 352..566 223..418 276 31.2 Plus
Rga-PA 585 CG2161-PA 358..572 223..418 276 31.2 Plus

FI22161.pep Sequence

Translation from 139 to 1455

> FI22161.pep
MKRHYYNTGDDQQEVESSPSPPPPPPFQSPLSSPESLQTPDGYPILYVDV
VKNKPKQELPPSASPSQPLAPEFSIFREDFPALPGSLPSALPTALPTTSS
PVVPDDWTAMMSNSEQVELAKFRNTVIRNSSDPCVNANGNEVLRQPTHAP
EKRQNMELLPHMYGYLGNPFRLNLSMIFTKQFLLEGVRQRAINAAHKRAA
LAKPAIQPPPGFENCKIFARLITNSDGMPLGGVTFELGSPTNETTSNVEA
KPSGSTIQGAFGMLGLAKKLRSINQNPLLFGNNVAHNIGGAADSIFTGPI
QEARLTPQEMSYKLPLNYLFNVNMSLQEPKIEEMHDELLFFFFYTYAGDM
MQMLAAAELAERGWRYHKYEHFWVIRQADNPNYLYHGFREFGEYNYFNMW
QWKILPRHFYLDPEILERTLSKEELYVTYGYHPQMSGI*

FI22161.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 12:24:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF15380-PA 481 GF15380-PA 30..480 32..437 982 47.5 Plus
Dana\GF18660-PA 590 GF18660-PA 387..577 246..418 276 31.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 12:24:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG25156-PA 432 GG25156-PA 1..432 1..438 1388 66.4 Plus
Dere\GG10926-PA 585 GG10926-PA 382..572 246..418 275 31.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 12:24:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH13753-PA 409 GH13753-PA 40..408 45..435 628 40.7 Plus
Dgri\GH17541-PA 571 GH17541-PA 368..559 246..419 288 33.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:50:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG15262-PA 438 CG15262-PA 1..438 1..438 2345 100 Plus
Rga-PC 579 CG2161-PC 352..566 223..418 276 31.2 Plus
Rga-PB 579 CG2161-PB 352..566 223..418 276 31.2 Plus
Rga-PA 585 CG2161-PA 358..572 223..418 276 31.2 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 12:24:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI17893-PA 527 GI17893-PA 257..526 175..435 685 51.8 Plus
Dmoj\GI22524-PA 567 GI22524-PA 364..554 246..418 284 33 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 12:24:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL26424-PA 477 GL26424-PA 37..477 44..435 657 36.8 Plus
Dper\GL23025-PA 568 GL23025-PA 365..555 246..418 276 31.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 12:24:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA13611-PA 494 GA13611-PA 219..494 174..435 559 41.9 Plus
Dpse\GA15276-PA 573 GA15276-PA 370..560 246..418 276 31.9 Plus
Dpse\GA13611-PA 494 GA13611-PA 37..97 44..112 153 53.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 12:24:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM16027-PA 430 GM16027-PA 1..430 1..438 1778 82.4 Plus
Dsec\GM10612-PA 579 GM10612-PA 376..566 246..418 276 31.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 12:24:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD24003-PA 434 GD24003-PA 1..434 1..438 1751 82.7 Plus
Dsim\GD19600-PA 579 GD19600-PA 376..566 246..418 275 31.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 12:24:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ17398-PA 467 GJ17398-PA 41..466 46..435 760 43.4 Plus
Dvir\GJ10128-PA 569 GJ10128-PA 366..556 246..418 281 33 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 12:24:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK18132-PA 576 GK18132-PA 273..574 159..436 711 50 Plus
Dwil\GK13370-PA 576 GK13370-PA 373..564 246..419 274 32.3 Plus
Dwil\GK18132-PA 576 GK18132-PA 52..126 45..116 172 49.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 12:24:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE20957-PA 432 GE20957-PA 1..432 1..438 1541 72.6 Plus
Dyak\GE24156-PA 585 GE24156-PA 382..572 246..418 275 31.9 Plus