Clone FI22366 Report

Search the DGRC for FI22366

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:223
Well:66
Vector:pFlc-1|pBS SK-
Associated Gene/TranscriptPpt1-RA
Protein status:FI22366.pep: gold
Sequenced Size:1180

Clone Sequence Records

FI22366.complete Sequence

1180 bp assembled on 2013-07-16

> FI22366.complete
ATCGGACCATATATTATCGATAGCAGACGACTAATTTGATTTGCAAAAAT
TGCACTCCAACAACAATGATTTCTATCTGCTGTTCTCGTTTTTCATGCAT
TTTATTTTTGCTGTTCCTGATCTTTTCCCTCGTGCTGAGCTACATATGGT
GGAGCCCGACGAAAGGAGGAACCAATCCGGAGGTCCTGCCGGTCGTTCTG
TGGCACGGAATGGGCGACACCTGCTGCGTACCCTTCAGCCTGGGTGCCAT
TATGAACCTGATCGTGGAGCAAACAAAGGGCGGCTATGTGCGATCCCTGC
AGATCGGCGGCAATGTTTTGATAGACTGGCAGAGCGGTTTCTTCATACAT
CCCAACGAACAGGTGGATTACGTTTGCAAGCAACTACTGCAGGATGAGCA
CCTGGCCAAGGGATACCACGCCATCGGATTCTCGCAAGGCGGCCAGTTTC
TGCGTGCGGTTGCCGAACGTTGCCCGAATCCGCCAATGAGGAACCTTATC
ACACTCGGTGGGCAGCACCAGGGCATCTTCGGACTGCCCATGTGCCCCAC
CTTAACCGAAAAGCCCTGTGATTATATCACGAGGCTACTGGACAACGCCG
CCTACGCACCTGAAGTGCAGAAGGCATTGGTTCAGGCCACCTACTGGCAC
GACCCGATCATGGAGAACAAATACCGCCTGGGCAGCACATTTCTCGCGGA
CATTAACAACGAGCTCTTCATCAACAAGTTCTACATTGAGAATCTGCAAA
AGCTTAAGAAATTTGTGATGGTGCAGTTCCTAAACGACACAATTGTCCAG
CCGAAGGAGTCCCAGTGGTTTCAATACTACACCACTGGGCAGAACAAAGT
CATCCAGCCCTTTACTGAGAGCAAAGTCTATCAGGATCTGGGACTGGACA
AGATGCATCGACAAGGACAACTTGTCTTTCTCGGCGTCGAAGGTGATCAC
TTGGCCATATCCAAGGCCTGGTTTATCCAGAACATAGTGCCTCTCTTACT
CGAAAAATAAGATGGTGCCCAAAAAGCACGTATTGTGACAAAAATGTTTG
CATAGGTTTAATCCATTCTTCCTATTAACATAAGCATTTTAATATTAATA
ATGACTTTTTGATACTTTTATACATGTTTAATTAGATGTTTAATAAATTC
AGTTTGGACATACGAAAAAAAAAAAAAAAA

FI22366.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 14:33:36
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 8581182..8581773 610..19 2945 99.8 Minus
chrX 22417052 chrX 8580374..8580649 1163..888 1380 100 Minus
chrX 22417052 chrX 8580892..8581041 760..611 750 100 Minus
chrX 22417052 chrX 8580709..8580835 887..761 635 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 14:33:34
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 8689435..8690044 610..1 3020 99.7 Minus
X 23542271 X 8688623..8688902 1167..888 1385 99.6 Minus
X 23542271 X 8689145..8689294 760..611 750 100 Minus
X 23542271 X 8688962..8689088 887..761 635 100 Minus
Blast to na_te.dros performed 2019-03-15 14:33:35
Subject Length Description Subject Range Query Range Score Percent Strand
Tc3 1743 Tc3 TC3 1743bp 253..326 1151..1078 125 69.7 Minus

FI22366.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 14:34:31 Download gff for FI22366.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 8580373..8580649 888..1164 99 <- Minus
chrX 8580709..8580835 761..887 100 <- Minus
chrX 8580892..8581041 611..760 100 <- Minus
chrX 8581182..8581801 1..610 98   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2013-07-16 18:06:12 Download gff for FI22366.complete
Subject Subject Range Query Range Percent Splice Strand
Ppt1-RA 1..945 66..1010 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 00:34:31 Download gff for FI22366.complete
Subject Subject Range Query Range Percent Splice Strand
Ppt1-RA 1..945 66..1010 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:02:42 Download gff for FI22366.complete
Subject Subject Range Query Range Percent Splice Strand
Ppt1-RA 1..945 66..1010 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-07-16 18:06:12 Download gff for FI22366.complete
Subject Subject Range Query Range Percent Splice Strand
Ppt1-RA 1..1163 1..1163 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:34:31 Download gff for FI22366.complete
Subject Subject Range Query Range Percent Splice Strand
Ppt1-RA 3..1165 1..1163 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:02:42 Download gff for FI22366.complete
Subject Subject Range Query Range Percent Splice Strand
Ppt1-RA 3..1165 1..1163 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:34:31 Download gff for FI22366.complete
Subject Subject Range Query Range Percent Splice Strand
X 8689145..8689294 611..760 100 <- Minus
X 8688626..8688902 888..1164 99 <- Minus
X 8688962..8689088 761..887 100 <- Minus
X 8689435..8690044 1..610 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:34:31 Download gff for FI22366.complete
Subject Subject Range Query Range Percent Splice Strand
X 8689145..8689294 611..760 100 <- Minus
X 8688626..8688902 888..1164 99 <- Minus
X 8688962..8689088 761..887 100 <- Minus
X 8689435..8690044 1..610 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:34:31 Download gff for FI22366.complete
Subject Subject Range Query Range Percent Splice Strand
X 8689145..8689294 611..760 100 <- Minus
X 8688626..8688902 888..1164 99 <- Minus
X 8688962..8689088 761..887 100 <- Minus
X 8689435..8690044 1..610 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:34:31 Download gff for FI22366.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 8583178..8583327 611..760 100 <- Minus
arm_X 8582659..8582935 888..1164 99 <- Minus
arm_X 8582995..8583121 761..887 100 <- Minus
arm_X 8583468..8584077 1..610 99   Minus

FI22366.hyp Sequence

Translation from 65 to 1009

> FI22366.hyp
MISICCSRFSCILFLLFLIFSLVLSYIWWSPTKGGTNPEVLPVVLWHGMG
DTCCVPFSLGAIMNLIVEQTKGGYVRSLQIGGNVLIDWQSGFFIHPNEQV
DYVCKQLLQDEHLAKGYHAIGFSQGGQFLRAVAERCPNPPMRNLITLGGQ
HQGIFGLPMCPTLTEKPCDYITRLLDNAAYAPEVQKALVQATYWHDPIME
NKYRLGSTFLADINNELFINKFYIENLQKLKKFVMVQFLNDTIVQPKESQ
WFQYYTTGQNKVIQPFTESKVYQDLGLDKMHRQGQLVFLGVEGDHLAISK
AWFIQNIVPLLLEK*

FI22366.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:56:42
Subject Length Description Subject Range Query Range Score Percent Strand
Ppt1-PB 314 CG12108-PB 1..314 1..314 1690 100 Plus
Ppt1-PA 314 CG12108-PA 1..314 1..314 1690 100 Plus

FI22366.pep Sequence

Translation from 65 to 1009

> FI22366.pep
MISICCSRFSCILFLLFLIFSLVLSYIWWSPTKGGTNPEVLPVVLWHGMG
DTCCVPFSLGAIMNLIVEQTKGGYVRSLQIGGNVLIDWQSGFFIHPNEQV
DYVCKQLLQDEHLAKGYHAIGFSQGGQFLRAVAERCPNPPMRNLITLGGQ
HQGIFGLPMCPTLTEKPCDYITRLLDNAAYAPEVQKALVQATYWHDPIME
NKYRLGSTFLADINNELFINKFYIENLQKLKKFVMVQFLNDTIVQPKESQ
WFQYYTTGQNKVIQPFTESKVYQDLGLDKMHRQGQLVFLGVEGDHLAISK
AWFIQNIVPLLLEK*

FI22366.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 12:23:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF19174-PA 306 GF19174-PA 16..306 24..314 1276 77.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 12:23:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG19029-PA 266 GG19029-PA 1..266 49..314 1321 91.4 Plus
Dere\GG23717-PA 288 GG23717-PA 13..262 30..289 147 24.7 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 12:23:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH24517-PA 306 GH24517-PA 21..305 30..314 1061 66.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:26:16
Subject Length Description Subject Range Query Range Score Percent Strand
Ppt1-PB 314 CG12108-PB 1..314 1..314 1690 100 Plus
Ppt1-PA 314 CG12108-PA 1..314 1..314 1690 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 12:23:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI15083-PA 311 GI15083-PA 31..309 35..313 1094 70.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 12:23:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL13042-PA 265 GL13042-PA 1..265 49..313 1132 77 Plus
Dper\GL19554-PA 282 GL19554-PA 84..281 115..311 151 26.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 12:23:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA11401-PA 317 GA11401-PA 23..317 19..313 1207 73.9 Plus
Dpse\GA18478-PA 282 GA18478-PA 84..281 115..311 151 26.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 12:23:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM21149-PA 314 GM21149-PA 1..314 1..314 1547 89.8 Plus
Dsec\GM18996-PA 288 GM18996-PA 25..262 42..289 148 25.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 12:23:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD16099-PA 266 GD16099-PA 1..266 49..314 1359 92.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 12:23:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ18890-PA 309 GJ18890-PA 34..307 40..313 1096 71.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 12:23:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK10327-PA 303 GK10327-PA 12..303 22..313 1121 69.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 12:23:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE17436-PA 266 GE17436-PA 1..266 49..314 1301 89.5 Plus
Dyak\GE18522-PA 288 GE18522-PA 25..262 42..289 147 25.5 Plus