Clone FI22458 Report

Search the DGRC for FI22458

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:224
Well:58
Vector:pFlc-1|pBS SK-
Associated Gene/TranscriptsNPF-RB
Protein status:FI22458.pep: gold
Sequenced Size:2491

Clone Sequence Records

FI22458.complete Sequence

2491 bp assembled on 2013-07-16

GenBank Submission: BT150152.1

> FI22458.complete
GGCATTCGTTCGGCGCGCTTCGAAGGAATCTCAACTTACCACCAACCAAT
CAACCTTGAAACGGCTAACCGAACAGAGAGTTTCAAAAAACCCAGTTTTC
AACTCAATTTTTTGTGATCTTGAGCCATCGTTTGGCCAGTTGCCAAACAT
TTAGTTAATTTTCAGTTGCAAAAAGCGTGGCATACATTTGCGTGCTCTCA
TTGGGCCAAATTCCAAACTTAATTGAAAAACTTTTTAAGGCACTTCTCCT
TAAAATCCGGACATTGTGAAATGTAAAATCCAGTTAAAGCAGTGCTCGCA
TTCTAAAGAAAATCTTATACAGAAAAAGACAATTCGTTTGAATAAGTAAA
TAAAGTTTCCACTTTAAATTTCAAAATAAATTTGCGTGAACGCGATTTGT
TATATTGAAGTGCAGTTTCCCATCAACGCGAGGCAAAAGTGATAAGTGAA
AATGTTTCATTTGAAGCGGGAACTGAGTCAAGGCTGCGCCTTGGCCCTCA
TCTGCCTGGTGTCCCTCCAGATGCAGCAGCCCGCCCAGGCGGAGGTGTCC
TCGGCTCAAGGCACTCCCCTGAGCAATCTCTATGATAATCTGCTGCAGCG
CGAGTACGCCGGACCCGTCGTCTTTCCCAACCACCAGGTGGAGCGTAAGG
CACAGCGCTCACCCTCTCTGCGCCTGCGATTCGGACGCAGTGATCCGGAC
ATGCTGAACAGCATTGTGGAAAAGCGTTGGTTCGGCGACGTCAACCAGAA
GCCCATCAGGTCGCCATCCCTGCGTCTGCGCTTCGGCAGGCGGGATCCCA
GTCTGCCGCAGATGCGGAGGACCGCCTATGATGACCTCCTGGAGCGGGAG
CTCACCCTCAACAGCCAGCAGCAGCAGCAGCAGTTGGGTACCGAGCCGGA
CTCCGATCTGGGTGCCGACTACGACGGACTGTACGAGCGAGTGGTGCGGA
AGCCACAACGACTTCGCTGGGGACGCAGTGTTCCTCAGTTCGAGGCAAAC
AACGCGGACAATGAACAAATTGAACGATCGCAATGGTACAACTCGCTTTT
GAACTCGGACAAGATGCGGCGAATGCTAGTGGCCCTCCAGCAGCAGTACG
AAATTCCGGAGAACGTGGCCAGCTATGCCAACGATGAGGACACTGATACG
GATCTGAATAACGATACGTCGGAGTTCCAAAGGGAAGTCCGTAAACCAAT
GCGCTTGCGATGGGGCAGGAGCACTGGCAAAGCTCCGTCAGAGCAAAAGC
ATACTCCCGAGGAAACCTCATCCATCCCACCAAAGACACAGAACTAAATT
TTTCGAAGCCGCCATGTGAAGGATCAGCAGGAGATCAGCAGGCATCAATT
ACAAGAAAATCGTCAACAAGCTACACGGTCAATAAGATACAGAAAAAATA
TATGCCCCGCGTCGGAAAACGTTTTTTAAAGCATTTTTGAGATCGCAGGG
GCTAGAATACACACAAATGAGCATATATATTATACAAACACACATATGTA
TGATTAACCACATAGTTTAACTTTTTGATTTGAATAGTTACAAGTAAACG
CAAACTTGGAAATTTATTCTGTTGTAATCTTTAACAATGCGCAGGTAAAA
CAAGGTAACAAAAATTGAACTTATATTGAAGTGTATTCATTTGCACTGAC
TTTAATTTCATTTCATTTCATTTATTTTGCTATATGTTCGATAATTCTGA
ATTTTTATTAACTCAAAAAACACTTAAGTCTCCCTATTTCTAACATGCTC
AATTAAGTAAACTTTGAAACTATTTGAATGCCCCGAAAACTTTTAGACTC
AATGTATATACAAAATGGAGAAACCTTTTAAAAACCAGCGCCAATTTGTT
ATGACAACAGTAGAATGCCATACAACTTATTGTTCTATTAGTGACACACT
TCTTGATTTCTAAACTAGTAAACTAGTAAGCGAATTTCGATTTAACGTTA
CGATGGAAATGTTTGAAAAACATAGAGGCCCCCGAAAGCTGTATTACTGT
AACACTTGTTATATTATGTGTGCTAAAACTTATAAATATATGTATATCAA
CTATTATATCGTACGACTATATATATATATATATATATATTTACGATGAG
CATTGTCTATTGAAATTTTATTGATGTATTTTAATAAAAGGAGAAAACAA
TTACAGAGGCAAGCGAGCATAAAGCTGATTGTTGTTAGAACACTTTTGTA
TATTTAATTTACACCATCATTGAAATTATTGTTTAACAACTAAAACATTA
TGTGGTGAGCATCCATAAACAGCTGAAAATTGCGAAAACAGTTTACCGCG
ATATATATCAGTATATGCGCATATATACCTTTAACTGAGTGTAATATCAT
GAATGTAAATAAAAGAGCAGGAATAATTAAAAGCAACCATATTTTACTCG
ATCTATGCAACAAATAAATAACTCAGATGGAGTAAAAAACTTAAAAAAAA
AAAAAAAAAAAAAAAAGACTTAAACAAAAAAAAAAAAAAAA

FI22458.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 14:34:47
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 20053532..20054731 1248..2446 5890 99.6 Plus
chr2L 23010047 chr2L 20052641..20053100 559..1018 2285 99.8 Plus
chr2L 23010047 chr2L 20026284..20026697 2..415 2055 99.8 Plus
chr2L 23010047 chr2L 20053237..20053467 1019..1249 1125 99.1 Plus
chr2L 23010047 chr2L 20052438..20052586 413..561 745 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 14:34:45
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 20055174..20056372 1248..2446 5980 99.9 Plus
2L 23513712 2L 20054277..20054736 559..1018 2300 100 Plus
2L 23513712 2L 20027916..20028329 2..415 2055 99.8 Plus
2L 23513712 2L 20054879..20055109 1019..1249 1155 100 Plus
2L 23513712 2L 20054074..20054222 413..561 745 100 Plus
Blast to na_te.dros performed 2019-03-15 14:34:45
Subject Length Description Subject Range Query Range Score Percent Strand
17.6 7439 17.6 DMIS176 7439bp AKA(J01060,J01061) Derived from X01472 (g8142) (Rel. 36, Last updated, Version 2). 6282..6350 317..380 117 68.1 Plus

FI22458.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 14:35:44 Download gff for FI22458.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 20026283..20026697 1..415 99 -> Plus
chr2L 20052441..20052585 416..560 100 -> Plus
chr2L 20052643..20053100 561..1018 99 -> Plus
chr2L 20053237..20053467 1019..1249 99 -> Plus
chr2L 20053534..20054727 1250..2442 97   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2013-07-16 18:55:55 Download gff for FI22458.complete
Subject Subject Range Query Range Percent Splice Strand
sNPF-RB 1..846 452..1297 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 00:35:36 Download gff for FI22458.complete
Subject Subject Range Query Range Percent Splice Strand
sNPF-RB 1..846 452..1297 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:03:29 Download gff for FI22458.complete
Subject Subject Range Query Range Percent Splice Strand
sNPF-RB 1..846 452..1297 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-07-16 18:55:55 Download gff for FI22458.complete
Subject Subject Range Query Range Percent Splice Strand
sNPF-RB 2..2442 2..2442 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:35:36 Download gff for FI22458.complete
Subject Subject Range Query Range Percent Splice Strand
sNPF-RB 2..2442 2..2442 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:03:29 Download gff for FI22458.complete
Subject Subject Range Query Range Percent Splice Strand
sNPF-RB 2..2442 2..2442 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:35:44 Download gff for FI22458.complete
Subject Subject Range Query Range Percent Splice Strand
2L 20027915..20028329 1..415 99 -> Plus
2L 20054077..20054221 416..560 100 -> Plus
2L 20054279..20054736 561..1018 100 -> Plus
2L 20054879..20055109 1019..1249 100 -> Plus
2L 20055176..20056368 1250..2442 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:35:44 Download gff for FI22458.complete
Subject Subject Range Query Range Percent Splice Strand
2L 20027915..20028329 1..415 99 -> Plus
2L 20054077..20054221 416..560 100 -> Plus
2L 20054279..20054736 561..1018 100 -> Plus
2L 20054879..20055109 1019..1249 100 -> Plus
2L 20055176..20056368 1250..2442 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:35:44 Download gff for FI22458.complete
Subject Subject Range Query Range Percent Splice Strand
2L 20027915..20028329 1..415 99 -> Plus
2L 20054077..20054221 416..560 100 -> Plus
2L 20054279..20054736 561..1018 100 -> Plus
2L 20054879..20055109 1019..1249 100 -> Plus
2L 20055176..20056368 1250..2442 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:35:36 Download gff for FI22458.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 20027915..20028329 1..415 99 -> Plus
arm_2L 20054077..20054221 416..560 100 -> Plus
arm_2L 20054279..20054736 561..1018 100 -> Plus
arm_2L 20054879..20055109 1019..1249 100 -> Plus
arm_2L 20055176..20056368 1250..2442 99   Plus

FI22458.pep Sequence

Translation from 451 to 1296

> FI22458.pep
MFHLKRELSQGCALALICLVSLQMQQPAQAEVSSAQGTPLSNLYDNLLQR
EYAGPVVFPNHQVERKAQRSPSLRLRFGRSDPDMLNSIVEKRWFGDVNQK
PIRSPSLRLRFGRRDPSLPQMRRTAYDDLLERELTLNSQQQQQQLGTEPD
SDLGADYDGLYERVVRKPQRLRWGRSVPQFEANNADNEQIERSQWYNSLL
NSDKMRRMLVALQQQYEIPENVASYANDEDTDTDLNNDTSEFQREVRKPM
RLRWGRSTGKAPSEQKHTPEETSSIPPKTQN*

FI22458.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 12:24:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF14444-PA 269 GF14444-PA 1..269 1..281 964 73.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 12:24:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG21216-PA 280 GG21216-PA 1..280 1..281 1420 95.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 12:24:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH13655-PA 288 GH13655-PA 11..288 11..281 833 64.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:43:45
Subject Length Description Subject Range Query Range Score Percent Strand
sNPF-PB 281 CG13968-PB 1..281 1..281 1465 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 12:24:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI13671-PA 292 GI13671-PA 1..292 1..281 861 63.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 12:24:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL26344-PA 283 GL26344-PA 1..275 1..276 997 75.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 12:24:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA12665-PA 283 GA12665-PA 1..275 1..276 986 74.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 12:24:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM17386-PA 280 GM17386-PA 1..280 1..281 1455 98.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 12:24:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD24240-PA 280 GD24240-PA 1..280 1..281 1442 97.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 12:24:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ18339-PA 288 GJ18339-PA 1..288 1..281 862 65.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 12:24:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK18728-PA 278 GK18728-PA 1..259 1..268 949 72.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 12:24:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE13291-PA 279 GE13291-PA 1..279 1..281 1392 94 Plus

FI22458.hyp Sequence

Translation from 451 to 1296

> FI22458.hyp
MFHLKRELSQGCALALICLVSLQMQQPAQAEVSSAQGTPLSNLYDNLLQR
EYAGPVVFPNHQVERKAQRSPSLRLRFGRSDPDMLNSIVEKRWFGDVNQK
PIRSPSLRLRFGRRDPSLPQMRRTAYDDLLERELTLNSQQQQQQLGTEPD
SDLGADYDGLYERVVRKPQRLRWGRSVPQFEANNADNEQIERSQWYNSLL
NSDKMRRMLVALQQQYEIPENVASYANDEDTDTDLNNDTSEFQREVRKPM
RLRWGRSTGKAPSEQKHTPEETSSIPPKTQN*

FI22458.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:57:18
Subject Length Description Subject Range Query Range Score Percent Strand
sNPF-PB 281 CG13968-PB 1..281 1..281 1465 100 Plus