Clone FI22878 Report

Search the DGRC for FI22878

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:228
Well:78
Vector:pOT2|pOTB7_DraIII
Associated Gene/TranscriptAdgf-E-RA
Protein status:FI22878.pep: gold
Sequenced Size:1809

Clone Sequence Records

FI22878.complete Sequence

1809 bp assembled on 2013-07-23

GenBank Submission: BT150197.1

> FI22878.complete
AAACATTTGATTTTTCTGACTTTAATTTCTAAATTCCATAAAATGTGAAA
AATTTATATTTGAAAGTCAAAAAATAGGGGCAAAGCGCAGATGACGGTCC
TGTTGAGCCACAGGATGCTCCTCGCTGGATGGGCGAGGCGTGCCACGCCC
ACCGCCGCCCAGTGGATACACCACAATCCAGAAAAGATGACGCTGCTCGA
GATGCTGGGCACCACCAATCTACGCAAGAGCACCCCCAAGGACTACCGAA
TCCTGCGCGAGATCTTCAACTCCTTCGAACGATACTCCGGAGTCGGCAAC
GACATTCAATTGACCTTGCCAGAGCGCGCTGCCAACGAGCTGATCATGTG
CGAAAAGAAGCGGGAGTACGAGAAGGGCATCATGGATCCATCGAAGTTCG
CGCCGGGACACCACATCTTCCAGGTGCTCACCAAGGTGAAGAAGTCGCCG
CTCTTCCAGATCCTGCGACGGATGCCCAAGGGTGCGGCCCTCAAGGCGCA
CGACACCTCCATGTGCAGTTCGAGGGTGGTGATCGAGATAACCTATCGGG
ATAACCTGTGGGTATGTACCACACAAAACGGCTGCCGTGTGGAGGAGTTC
CGATTCGCAAAGGATAAGCCCAAGGACGTCAGTTTCGAGAATGGCGAGTG
GCAGCCCATGGAAAAGCTCAGAGAATTGCGCGGCGAGGAGAATCTTAGAA
AGTATTTACAAATGCGATTCAGCATGTACCCTTTGGCCAGCTTTACGACC
AATGCCCACGCCTGGCGCCACATGATGGGCATCTTTGGCCTGCTGGACGG
TCTACTACAGTACGCCCCCGTTTGGGGCGACTACTACTACAATGCGCTAA
AGGAATTCTACGCCGACGGAGTGCAATATTTGGAGGTAAGATCTGTGCTC
CCGCAGCTCTACTCCCTGGATGGTAGCCGGATGCCCAAGCGGGAAACTGT
GCAAATCTACAAGGACACACTGGAGCGATTCAAGAAGGAGCATCCAGGAT
TCATCGATTCCAAACTGATATACGCGCCCATTCGGCATGTGCAACCAGAA
TTAGTGGGAGAATACATTAAGGAGTGCACAGAACTGAATAAAGAGTTTCC
CAGCTTCGTGGTTGGCTTCGATTTGGTGGGTCAGGAGGACGTGGGTCATC
CGCTGAGCAATTTCGCAGCGGAGCTACTCAAGCTGCCCGACCACATCCAC
TTTTACTTCCACGCCGGCCAAACCAACTGGTATGGATCACATGTGGACCA
GAATCTGTTGGATGCCATTGTGCTGGGCACAAAGAGGATCGGTCATGGCT
ACACGATCACAAAGCACCCGGTGCTCATGCGGCTGGCCAAGTACCTGAAC
ATCGCGCTGGAGGTGTGTCCGGTGTCCAACCAGGTGCTCCAACTGGGATC
CGACTACCGCAGTCATCCGGCTGCCACGCTGATCGCCGAGAATGTGCCCA
TGGTGATCGCCTCCGGCAGTCCGGGCTTCTGGCGAGCCGCTCCTCTGTCC
CATGACTTCTACATGGCCTTTCTGGGCATTGCACCCATGAATGCCGATCT
GAAGTTTCTCAAGCGAACCGCCAAGAACTCCATTAAGTACAGCTCGCTAA
AGGACGAGGCCAAGGCCGAGGCCATGGAGAAGTGGAAAAAGCAATGGGAT
AAGTGGGTCGAGAATATAGTCAGACAAAGGAAAAAGGATTCAGAGACTGA
AAAGAAATAAAGCACATACTAGATAGCTGACTAATAAATTGCATGTGTAC
TATACATTGTTAGTATATGTTTCTATAAATATTTAAACAACAAAAAAAAA
AAAAAAAAA

FI22878.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 11:23:16
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 10544979..10546067 1089..1 5295 99.1 Minus
chr2R 21145070 chr2R 10544110..10544811 1791..1090 3435 99.3 Minus
chr3L 24539361 chr3L 17738627..17739099 1562..1090 445 72.9 Minus
chr3L 24539361 chr3L 17742502..17742596 1298..1204 205 81.1 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 11:23:14
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 14657667..14658755 1089..1 5430 99.9 Minus
2R 25286936 2R 14656798..14657499 1791..1090 3390 98.9 Minus
3L 28110227 3L 17748996..17749468 1562..1090 445 72.9 Minus
3L 28110227 3L 17752871..17752965 1298..1204 205 81.1 Minus
Blast to na_te.dros performed on 2019-03-15 11:23:14 has no hits.

FI22878.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 11:24:16 Download gff for FI22878.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 10544110..10544811 1090..1791 99 <- Minus
chr2R 10544979..10546067 1..1089 99   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2013-07-23 13:49:39 Download gff for FI22878.complete
Subject Subject Range Query Range Percent Splice Strand
Adgf-E-RA 1..1620 91..1710 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:27:57 Download gff for FI22878.complete
Subject Subject Range Query Range Percent Splice Strand
Adgf-E-RA 1..1620 91..1710 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:31:49 Download gff for FI22878.complete
Subject Subject Range Query Range Percent Splice Strand
Adgf-E-RA 1..1620 91..1710 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-07-23 13:49:39 Download gff for FI22878.complete
Subject Subject Range Query Range Percent Splice Strand
Adgf-E-RA 1..1791 1..1791 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:27:57 Download gff for FI22878.complete
Subject Subject Range Query Range Percent Splice Strand
Adgf-E-RA 1..1791 1..1791 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:31:49 Download gff for FI22878.complete
Subject Subject Range Query Range Percent Splice Strand
Adgf-E-RA 1..1791 1..1791 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:24:16 Download gff for FI22878.complete
Subject Subject Range Query Range Percent Splice Strand
2R 14656798..14657499 1090..1791 98 <- Minus
2R 14657667..14658755 1..1089 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:24:16 Download gff for FI22878.complete
Subject Subject Range Query Range Percent Splice Strand
2R 14656798..14657499 1090..1791 98 <- Minus
2R 14657667..14658755 1..1089 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:24:16 Download gff for FI22878.complete
Subject Subject Range Query Range Percent Splice Strand
2R 14656798..14657499 1090..1791 98 <- Minus
2R 14657667..14658755 1..1089 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:27:57 Download gff for FI22878.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 10544303..10545004 1090..1791 98 <- Minus
arm_2R 10545172..10546260 1..1089 99   Minus

FI22878.hyp Sequence

Translation from 90 to 1709

> FI22878.hyp
MTVLLSHRMLLAGWARRATPTAAQWIHHNPEKMTLLEMLGTTNLRKSTPK
DYRILREIFNSFERYSGVGNDIQLTLPERAANELIMCEKKREYEKGIMDP
SKFAPGHHIFQVLTKVKKSPLFQILRRMPKGAALKAHDTSMCSSRVVIEI
TYRDNLWVCTTQNGCRVEEFRFAKDKPKDVSFENGEWQPMEKLRELRGEE
NLRKYLQMRFSMYPLASFTTNAHAWRHMMGIFGLLDGLLQYAPVWGDYYY
NALKEFYADGVQYLEVRSVLPQLYSLDGSRMPKRETVQIYKDTLERFKKE
HPGFIDSKLIYAPIRHVQPELVGEYIKECTELNKEFPSFVVGFDLVGQED
VGHPLSNFAAELLKLPDHIHFYFHAGQTNWYGSHVDQNLLDAIVLGTKRI
GHGYTITKHPVLMRLAKYLNIALEVCPVSNQVLQLGSDYRSHPAATLIAE
NVPMVIASGSPGFWRAAPLSHDFYMAFLGIAPMNADLKFLKRTAKNSIKY
SSLKDEAKAEAMEKWKKQWDKWVENIVRQRKKDSETEKK*

FI22878.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:00:20
Subject Length Description Subject Range Query Range Score Percent Strand
Adgf-E-PA 539 CG10143-PA 1..539 1..539 2863 100 Plus
Adgf-B-PA 520 CG5998-PA 31..518 43..530 1619 59.2 Plus
Adgf-A-PB 553 CG5992-PB 60..538 46..526 1327 49.7 Plus
Adgf-A-PA 553 CG5992-PA 60..538 46..526 1327 49.7 Plus
Adgf-D-PA 502 CG9621-PA 21..501 46..530 825 37.5 Plus

FI22878.pep Sequence

Translation from 90 to 1709

> FI22878.pep
MTVLLSHRMLLAGWARRATPTAAQWIHHNPEKMTLLEMLGTTNLRKSTPK
DYRILREIFNSFERYSGVGNDIQLTLPERAANELIMCEKKREYEKGIMDP
SKFAPGHHIFQVLTKVKKSPLFQILRRMPKGAALKAHDTSMCSSRVVIEI
TYRDNLWVCTTQNGCRVEEFRFAKDKPKDVSFENGEWQPMEKLRELRGEE
NLRKYLQMRFSMYPLASFTTNAHAWRHMMGIFGLLDGLLQYAPVWGDYYY
NALKEFYADGVQYLEVRSVLPQLYSLDGSRMPKRETVQIYKDTLERFKKE
HPGFIDSKLIYAPIRHVQPELVGEYIKECTELNKEFPSFVVGFDLVGQED
VGHPLSNFAAELLKLPDHIHFYFHAGQTNWYGSHVDQNLLDAIVLGTKRI
GHGYTITKHPVLMRLAKYLNIALEVCPVSNQVLQLGSDYRSHPAATLIAE
NVPMVIASGSPGFWRAAPLSHDFYMAFLGIAPMNADLKFLKRTAKNSIKY
SSLKDEAKAEAMEKWKKQWDKWVENIVRQRKKDSETEKK*

FI22878.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 12:26:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF13523-PA 550 GF13523-PA 1..532 1..532 2128 71.2 Plus
Dana\GF23893-PA 516 GF23893-PA 5..514 20..530 1609 56.8 Plus
Dana\GF23892-PA 557 GF23892-PA 61..539 46..526 1376 50.7 Plus
Dana\GF18149-PA 499 GF18149-PA 18..495 46..527 841 37.4 Plus
Dana\GF16876-PA 506 GF16876-PA 41..501 68..527 807 35.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 12:26:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG22410-PA 539 GG22410-PA 1..539 1..539 2740 92.9 Plus
Dere\GG15788-PA 520 GG15788-PA 29..518 41..530 1677 60.6 Plus
Dere\GG15787-PA 555 GG15787-PA 60..538 46..526 1350 49.7 Plus
Dere\GG17028-PA 500 GG17028-PA 10..496 34..527 841 37.2 Plus
Dere\GG19793-PA 506 GG19793-PA 17..504 44..530 777 34.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 12:26:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH22920-PA 525 GH22920-PA 19..517 34..532 1745 60.9 Plus
Dgri\GH15341-PA 508 GH15341-PA 5..507 19..529 1572 55.4 Plus
Dgri\GH15340-PA 552 GH15340-PA 50..542 38..529 1366 50 Plus
Dgri\GH18002-PA 315 GH18002-PA 1..300 229..526 963 57.3 Plus
Dgri\GH14048-PA 466 GH14048-PA 2..466 66..532 826 36.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:50:42
Subject Length Description Subject Range Query Range Score Percent Strand
Adgf-E-PA 539 CG10143-PA 1..539 1..539 2863 100 Plus
Adgf-B-PA 520 CG5998-PA 31..518 43..530 1619 59.2 Plus
Adgf-A-PB 553 CG5992-PB 60..538 46..526 1327 49.7 Plus
Adgf-A-PA 553 CG5992-PA 60..538 46..526 1327 49.7 Plus
Adgf-D-PA 502 CG9621-PA 21..501 46..530 825 37.5 Plus
Adgf-A2-PC 542 CG32178-PC 48..537 39..527 767 35.8 Plus
Adgf-A2-PB 542 CG32178-PB 48..537 39..527 767 35.8 Plus
Adgf-A2-PA 561 CG32178-PA 67..556 39..527 767 35.8 Plus
Adgf-C-PA 506 CG9345-PA 6..501 33..527 755 32.3 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 12:26:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI12946-PA 522 GI12946-PA 31..516 44..529 1589 57 Plus
Dmoj\GI12945-PA 548 GI12945-PA 48..535 38..526 1325 48 Plus
Dmoj\GI24423-PA 501 GI24423-PA 23..496 52..527 858 37.3 Plus
Dmoj\GI23159-PA 509 GI23159-PA 24..507 48..530 769 34.8 Plus
Dmoj\GI12943-PA 573 GI12943-PA 96..571 55..528 767 37.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 12:26:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL10635-PA 531 GL10635-PA 18..523 27..532 2103 72.9 Plus
Dper\GL18074-PA 425 GL18074-PA 2..410 116..526 1249 52.6 Plus
Dper\GL25221-PA 539 GL25221-PA 314..539 305..530 859 65.9 Plus
Dper\GL24450-PA 499 GL24450-PA 24..495 52..527 839 38.2 Plus
Dper\GL23084-PA 514 GL23084-PA 49..510 68..528 800 36.3 Plus
Dper\GL25221-PA 539 GL25221-PA 8..105 11..108 169 36.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 12:26:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA10106-PA 531 GA10106-PA 18..523 27..532 2096 72.7 Plus
Dpse\GA19286-PA 527 GA19286-PA 38..527 41..530 1717 61 Plus
Dpse\GA19282-PA 551 GA19282-PA 58..536 46..526 1390 50.7 Plus
Dpse\GA21919-PA 499 GA21919-PA 24..495 52..527 833 37.8 Plus
Dpse\GA27135-PB 506 GA27135-PB 41..502 68..528 801 36.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 12:27:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM20196-PA 539 GM20196-PA 1..539 1..539 2826 96.3 Plus
Dsec\GM24312-PA 520 GM24312-PA 29..518 41..530 1620 58.8 Plus
Dsec\GM24311-PA 553 GM24311-PA 60..538 46..526 1365 50.1 Plus
Dsec\GM25912-PA 502 GM25912-PA 21..498 46..527 840 37.4 Plus
Dsec\GM24310-PA 561 GM24310-PA 83..556 55..527 780 36.4 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 12:27:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD25667-PA 539 GD25667-PA 1..539 1..539 2806 95.7 Plus
Dsim\GD12382-PA 520 GD12382-PA 29..518 41..530 1650 58.8 Plus
Dsim\GD12381-PA 553 GD12381-PA 60..538 46..526 1358 49.7 Plus
Dsim\GD20479-PA 502 GD20479-PA 17..498 42..527 840 37.8 Plus
Dsim\GD18924-PA 506 GD18924-PA 6..501 33..527 763 32.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 12:27:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ21491-PA 530 GJ21491-PA 22..517 37..532 1735 61.1 Plus
Dvir\GJ13088-PA 519 GJ13088-PA 32..517 43..528 1667 59.5 Plus
Dvir\GJ13087-PA 549 GJ13087-PA 53..535 46..526 1329 49.1 Plus
Dvir\GJ14281-PA 501 GJ14281-PA 23..501 52..532 851 37.6 Plus
Dvir\GJ13086-PA 566 GJ13086-PA 90..563 55..527 792 38 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 12:27:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK19522-PA 537 GK19522-PA 32..530 34..532 2030 70.5 Plus
Dwil\GK12328-PA 512 GK12328-PA 21..512 41..532 1703 60.4 Plus
Dwil\GK12327-PA 565 GK12327-PA 25..562 1..537 1393 46.8 Plus
Dwil\GK12326-PA 492 GK12326-PA 23..492 61..529 823 35.9 Plus
Dwil\GK13065-PA 500 GK13065-PA 25..496 52..527 801 36.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 12:27:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE12299-PA 534 GE12299-PA 1..533 1..533 2689 91 Plus
Dyak\GE22125-PA 519 GE22125-PA 28..517 41..530 1683 60 Plus
Dyak\GE22124-PA 553 GE22124-PA 60..538 46..526 1343 48.2 Plus
Dyak\GE24420-PA 500 GE24420-PA 25..496 52..527 835 38 Plus
Dyak\GE26291-PA 506 GE26291-PA 2..501 31..527 785 33.8 Plus