Clone FI22884 Report

Search the DGRC for FI22884

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:228
Well:84
Vector:pOT2|pOTB7_DraIII
Associated Gene/TranscriptCG13733-RA
Protein status:FI22884.pep: gold
Sequenced Size:1078

Clone Sequence Records

FI22884.complete Sequence

1078 bp assembled on 2013-07-23

GenBank Submission: BT150195.1

> FI22884.complete
AGACAAGCCGTGTGTTTTGGACTACCAAAATTTGATTCGTCCAGCGCGAT
GCCATACCACGATCGAGCCAAAGCCCGATTGGAGAACGAGGTGGTTCTGC
TGCGGAGCGAGGTGTCCTCGCTGCGATCCAAGCACAACCAACATCGTAAG
TATCGGCAGGAGCAGGTGGTTCTGCAGGCGCGTATGGAACAGGAGATCCA
GCTTCTACAGAGCGAACTAGCCGCAGCTCAATCGAATCGGAATGAGCGGG
AGTGCGGTGGAGCCGAGCAGTGTTCAGTGTTGAGCCAGCAGCTGGAGAAA
CTTGACGAGCACGTGGCTAAGCAGGAGAAGTACATTGCCTTCCTGGAGGA
GCAGATCAATCTCACACGTAACAAGTACCAGCAACGTATGACCGAAGTCC
GGCAGAATGCCGAACTGGTGGAAAAGGAGATGAAGCGGGTGCGCCGCGAG
ATGAAGACCATTGCCGAGCAGGCTGGGGAAGTGGACAGCCTCAAGAACCA
AGTCGGTTTCCTCACCGCCAAGCTGGAGCGCCGGAACGCCATCATCTCCA
GGTACGAAGCCCAGCAGGAGGAAATGATAAGTATCATGGCAAGTCTCCAG
AAGAAGAAAGTTAAAAAAACGCGCCATCAGAAGATTCACAACAACCATGA
CGATAAAGCTGATGTCAGATCGATCCCTTCCGAACAGCTACCAATGCCCA
AGCCGAGTGATCAAATAAAGCATCGCAAGAAACGGAAATTTGGCGAAGGC
GATAAGGAAGATTCCAGCTCGGCGGGCTCTGATAAGCCACCAAGTTTTGA
GGCGAATCCCAGGTCTTCAAAAATCCGATCCCATAACTTGGACTGCCTCT
CCTCTGCGCTGAAAAATAAGTTAAGTAACCAGCAACAGTCAACTGTCGAG
GGATGATCTGATTTCGTACCCATTATCTGATGGATATTCAAATTTATGGT
TTTTAGATAAGCTTTTTACAAAATTTCTTCTGTAACCGAATATCTCTGTA
AAAATTGTTATGTACATACATATATAGATCTCTTATGAACAGTAAATGAT
TAAACTAACCAAAAAAAAAAAAAAAAAA

FI22884.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 11:23:08
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 17467315..17468374 1060..1 5225 99.5 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 11:23:06
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 17477792..17478854 1063..1 5255 99.6 Minus
Blast to na_te.dros performed on 2019-03-15 11:23:07 has no hits.

FI22884.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 11:24:14 Download gff for FI22884.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 17467315..17468374 1..1060 99   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2013-07-23 13:49:35 Download gff for FI22884.complete
Subject Subject Range Query Range Percent Splice Strand
CG13733-RA 1..858 49..906 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:27:55 Download gff for FI22884.complete
Subject Subject Range Query Range Percent Splice Strand
CG13733-RA 1..858 49..906 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:31:44 Download gff for FI22884.complete
Subject Subject Range Query Range Percent Splice Strand
CG13733-RA 1..858 49..906 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-07-23 13:49:35 Download gff for FI22884.complete
Subject Subject Range Query Range Percent Splice Strand
CG13733-RA 73..1132 1..1060 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:27:55 Download gff for FI22884.complete
Subject Subject Range Query Range Percent Splice Strand
CG13733-RA 73..1132 1..1060 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:31:44 Download gff for FI22884.complete
Subject Subject Range Query Range Percent Splice Strand
CG13733-RA 73..1132 1..1060 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:24:14 Download gff for FI22884.complete
Subject Subject Range Query Range Percent Splice Strand
3L 17477795..17478854 1..1060 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:24:14 Download gff for FI22884.complete
Subject Subject Range Query Range Percent Splice Strand
3L 17477795..17478854 1..1060 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:24:14 Download gff for FI22884.complete
Subject Subject Range Query Range Percent Splice Strand
3L 17477795..17478854 1..1060 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:27:55 Download gff for FI22884.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 17470895..17471954 1..1060 99   Minus

FI22884.hyp Sequence

Translation from 0 to 905

> FI22884.hyp
RQAVCFGLPKFHSSSAMPYHDRAKARLENEVVLLRSEVSSLRSKHNQHRK
YRQEQVVLQARMEQEIQLLQSELAAAQSNRNERECGGAEQCSVLSQQLEK
LDEHVAKQEKYIAFLEEQINLTRNKYQQRMTEVRQNAELVEKEMKRVRRE
MKTIAEQAGEVDSLKNQVGFLTAKLERRNAIISRYEAQQEEMISIMASLQ
KKKVKKTRHQKIHNNHDDKADVRSIPSEQLPMPKPSDQIKHRKKRKFGEG
DKEDSSSAGSDKPPSFEANPRSSKIRSHNLDCLSSALKNKLSNQQQSTVE
G*

FI22884.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:00:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG13733-PA 285 CG13733-PA 1..285 17..301 1431 100 Plus

FI22884.pep Sequence

Translation from 0 to 905

> FI22884.pep
RQAVCFGLPKFDSSSAMPYHDRAKARLENEVVLLRSEVSSLRSKHNQHRK
YRQEQVVLQARMEQEIQLLQSELAAAQSNRNERECGGAEQCSVLSQQLEK
LDEHVAKQEKYIAFLEEQINLTRNKYQQRMTEVRQNAELVEKEMKRVRRE
MKTIAEQAGEVDSLKNQVGFLTAKLERRNAIISRYEAQQEEMISIMASLQ
KKKVKKTRHQKIHNNHDDKADVRSIPSEQLPMPKPSDQIKHRKKRKFGEG
DKEDSSSAGSDKPPSFEANPRSSKIRSHNLDCLSSALKNKLSNQQQSTVE
G*

FI22884.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 12:26:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF23910-PA 294 GF23910-PA 1..200 17..206 518 52 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 12:26:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG15807-PA 290 GG15807-PA 1..289 17..300 1057 74.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 12:26:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH15266-PA 203 GH15266-PA 5..201 60..246 245 34.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:02:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG13733-PA 285 CG13733-PA 1..285 17..301 1431 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 12:26:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI11975-PA 201 GI11975-PA 5..158 60..201 220 37.8 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 12:26:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL15479-PA 247 GL15479-PA 10..179 57..213 244 35.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 12:26:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA12493-PA 247 GA12493-PA 10..179 57..213 249 35.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 12:26:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM24329-PA 220 GM24329-PA 1..218 17..234 991 91.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 12:26:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD12402-PA 284 GD12402-PA 1..283 17..300 1270 90.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 12:26:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ12200-PA 218 GJ12200-PA 5..216 60..292 249 32 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 12:26:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK18048-PA 229 GK18048-PA 14..170 60..211 258 37.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 12:26:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE22146-PA 286 GE22146-PA 1..285 17..300 1035 73.7 Plus