FI23143.complete Sequence
578 bp assembled on 2013-09-12
GenBank Submission: BT150233.1
> FI23143.complete
CCCTCTCTACGAACTCAGGACGCTCTTCTTTGGCCACCAGAAAGAGTGAG
TGAAGACTTGGCTAATCGCCGACGACATACGTTGAAGAGCTCCAGACTGG
CACACTTGCACATATAAAAAGTGGACCCAACCGAATTTTGCTTGTCAGTT
AATGCCCATCAATCGAATCAATCCCAGCACAGCCATGAGAAGCGCGTCGC
TTAAGTTCTATCTGATATGTCTGCTAGTTATCTGCGTGATCGGTTGGAGT
GCTGGAGCACCGAGTCCGCAACTTTCACGTAAGGAACTCGAGGATCGATA
TCGACAAAAGCCCCCGGTGCCTGATGAGCGAGATGCGGATGCAGAATTGG
ATAGTGCCTACGATCGGAATACCCGAAGACCTTGAAGTGCAAATCTGAAA
GGCTGGAGACACCCAACGCCCACAATTGATTTGTGGTTCTGTGTGGAGTG
CCACTTTTTATGTCGTATTCAGGGTTATGGCTATGTAGTTCTAAGCTTAG
GCAAAATGTACAAGCGTAAAATAAAGCAATTACTTGGGTGAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAA
FI23143.complete Blast Records
Blast to d_melanogaster_OreR.fa performed 2019-03-17 00:18:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3L | 24539361 | chr3L | 6224975..6225279 | 540..236 | 1525 | 100 | Minus |
chr3L | 24539361 | chr3L | 6225343..6225496 | 236..83 | 770 | 100 | Minus |
chr3L | 24539361 | chr3L | 6225806..6225885 | 82..3 | 400 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2019-03-17 00:18:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 6232466..6232773 | 543..236 | 1540 | 100 | Minus |
3L | 28110227 | 3L | 6232837..6232990 | 236..83 | 770 | 100 | Minus |
3L | 28110227 | 3L | 6233300..6233381 | 82..1 | 410 | 100 | Minus |
Blast to na_te.dros performed on 2019-03-17 00:18:34 has no hits.
FI23143.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-17 00:19:11 Download gff for
FI23143.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3L | 6224975..6225278 | 237..540 | 100 | <- | Minus |
chr3L | 6225343..6225496 | 83..236 | 100 | <- | Minus |
chr3L | 6225806..6225887 | 1..82 | 98 | | Minus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-09-12 14:18:01 Download gff for
FI23143.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
BG642312-RA | 1..234 | 152..385 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:24:04 Download gff for
FI23143.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
BG642312-RA | 1..234 | 152..385 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-12 14:18:01 Download gff for
FI23143.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
BG642312-RA | 1..540 | 1..540 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:24:04 Download gff for
FI23143.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
BG642312-RA | 1..540 | 1..540 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 00:19:11 Download gff for
FI23143.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 6232469..6232772 | 237..540 | 100 | <- | Minus |
3L | 6232837..6232990 | 83..236 | 100 | <- | Minus |
3L | 6233300..6233381 | 1..82 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 00:19:11 Download gff for
FI23143.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 6232469..6232772 | 237..540 | 100 | <- | Minus |
3L | 6232837..6232990 | 83..236 | 100 | <- | Minus |
3L | 6233300..6233381 | 1..82 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 00:19:11 Download gff for
FI23143.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 6232469..6232772 | 237..540 | 100 | <- | Minus |
3L | 6232837..6232990 | 83..236 | 100 | <- | Minus |
3L | 6233300..6233381 | 1..82 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-12 14:18:01 Download gff for
FI23143.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 6225569..6225872 | 237..540 | 100 | <- | Minus |
arm_3L | 6225937..6226090 | 83..236 | 100 | <- | Minus |
arm_3L | 6226400..6226481 | 1..82 | 100 | | Minus |
FI23143.pep Sequence
Translation from 151 to 384
> FI23143.pep
MPINRINPSTAMRSASLKFYLICLLVICVIGWSAGAPSPQLSRKELEDRY
RQKPPVPDERDADAELDSAYDRNTRRP*
FI23143.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:52:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF10907-PA | 80 | GF10907-PA | 1..70 | 12..77 | 187 | 55.7 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:52:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG14067-PA | 66 | GG14067-PA | 1..66 | 12..77 | 313 | 87.9 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:14:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
BG642312-PB | 77 | CG33943-PB | 1..77 | 1..77 | 404 | 100 | Plus |
BG642312-PA | 77 | CG33943-PA | 1..77 | 1..77 | 404 | 100 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:52:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM13849-PA | 77 | GM13849-PA | 1..77 | 1..77 | 378 | 93.5 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:52:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD13134-PA | 77 | GD13134-PA | 1..77 | 1..77 | 368 | 90.9 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:52:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE20492-PA | 74 | GE20492-PA | 1..74 | 1..77 | 286 | 75.3 | Plus |
FI23143.hyp Sequence
Translation from 151 to 384
> FI23143.hyp
MPINRINPSTAMRSASLKFYLICLLVICVIGWSAGAPSPQLSRKELEDRY
RQKPPVPDERDADAELDSAYDRNTRRP*
FI23143.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:00:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
BG642312-PB | 77 | CG33943-PB | 1..77 | 1..77 | 404 | 100 | Plus |
BG642312-PA | 77 | CG33943-PA | 1..77 | 1..77 | 404 | 100 | Plus |