Clone FI23926 Report

Search the DGRC for FI23926

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:239
Well:26
Vector:pFlc-1|pBS SK-
Associated Gene/TranscriptGrip75-RA
Protein status:FI23926.pep: gold
Sequenced Size:2152

Clone Sequence Records

FI23926.complete Sequence

2152 bp assembled on 2013-08-23

GenBank Submission: BT150219.1

> FI23926.complete
ATCTCTGTCGGACATCTGGCGCAAATGAAATACAAATACCGAATTAAAGC
AGCAAAACAATGATACACGATTTGTTATTGGCTTGCCGGAGCCACAATCC
GGAGCAGCTGGGTATAAAGGCATTCAATGAAACCACAGTCATTGACCAGT
TCATACATCCTTGCGAGCGGGAGATATTTATGGACATTATAAAAATCATT
AAGGTTTACCAAGAAGTTGAGCAGTTTACCCATTCATCGGGAAGAAAGTC
CGACACACATGGCGAACTTCCAGATAGTTTGCATGGTTACTACTTGCTCA
ATTTGGCCAAGGGCATTGAAATGGCTCTGGAGGAGTACTACGCTGAGATC
GGACGTCTGGAGAAGTATTGTTTGGGTAACGAGCGCAATTCGCTCTCATA
TGTCTACAATGCCCTGTACGCCAAGTTCCCCCTTCTGGTCTTCATGCGTA
ATCTCATCACAGAGATCCATGTGCTGAATCTGCGAGGATGCGTCTTGCTC
CACAATCTACATCAGCAGTGCGAGCACGGCGATATTCAACTGGAAAAAGC
AATCAAGATAATTATGAAGCCTGTTAAGAACGCATTTTTCTCCAGCCTGG
CTCACTGGCTGTTGTTTGGAGTGATTGACGATGTCCACTCGGAATTCTTT
ATTAAGTTTACCCCAACGGATGCAGTTGATGGTAGCTCATTCAGCAAATC
AGCCACTTGCTCACTTCTGAGCGCAGAGAAAAACCCCGAGGATTACATAT
GGCAATATGAGGTGAATATGTCTCAGCTGCCAGGATTTTTCTCCATCGTT
TTAGCCGAAAAAGTTCTGTTCGTGGGACAAACAGTGCTGGTCTTCAAAAT
GGGGCGCAACGTAAAAGTTAAAAACAAAACCGACCCACTGGCGGCAAAAC
TGGCTGAATTGGATTCAGATGATATCTATCAGCTGTGGAGCGGCAGGGAG
TCCGAGTTCTTCAAAATGGTCGTTGATTTGAGCAACGAGGACACCATCAA
TGTGTTTCGCCTCGAGAAGGTTATTATCGATATCAAGAATTACGTTAGCG
CCCGGCTGTCGGAGATCGCTGTGAACGAAGTGGATCTGGAGCGGCAAATG
GGACTGATTAAGGACTTCTTTTTGCTAGGCAGAGGAGAGTTCTACTTGGA
GTTCTGCTCCCAAATGGTCGGTACCATGGAAACTTATCGCGAAGAACGTT
TTAAAAACGTCACTAGATCATTTGAGCTGGCAGCTACTGTCACGGGAATC
ACAGATGACTTGGACAAGTTTTCACTGATCTGCCAGAGAAGCACGTCTGA
ACCAGACGATACCTCCGACTTTAATTTTCTGCAAGGCCTCAGTCTAAAAT
ATGAGTATGAGTGGCCATTGAATCTTTTGTTCTCCCCAACAACGATCGAG
CGGTACAACAATATATTCCGATTTTTACTGATCATTCGAACATATCAATA
CGAAATACAAAGGGTCTGGGCCAAGCAGACTTGGAGGGCGAAGAGTGCAA
AGGATGTGCCTCCAAATAACAAAATCATAACTCTTCGCAACTATCTAATG
TTCTTTCTGAACAACATGCAGTATTACATTCAAGTTGATGTGCTGGAAAG
TCAATTTGGAATTTTGATGAATGTGATCAAGAGCAGGAGTGATTTCGAAG
TTATACAAAGGGCTCACACTGTATTTCTGGCAAATGTTCTTTCGCATTGC
TTCCTGCTTAACGAATCAGAGACCCAATTGAATGTCACCGGGAGCCAAAA
CCGAAATCCCATTTATGGAACCCTTCTTAAACTCTTTGGCATATGTGAGA
AGTTTGCGCATATGACCCAAACGAAAGATCCGTCTGATGACTTAGAGGAT
GAAGTCGACCAACTTAATGAAAGTTTTGGTGTTCAAATTGCGAGCCTTAT
CCAACTATTAGTCGATGTAAAATCAGCTTCTTGTTTGGGTCCGCTTTCGC
AGCTGCTTTTGCGTTTGGATTTCAATTGTTGGTTCAGTGCCAGTCATAAT
ACGTCCGCATGAATACGATGTTTTTGCCTAAAGTTGTAGCCGCTTAATGT
CTTCTATACGAAAGTCATTTCTGAAAAACAAACAAACGATTAATAAACTG
AAGAAAATGTTATATTTTAAATAAACTTTCTTACCTTAAAAAAAAAAAAA
AA

FI23926.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-17 00:17:38
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 10483081..10483588 719..1226 2540 100 Plus
chr2L 23010047 chr2L 10483651..10484027 1225..1601 1870 99.7 Plus
chr2L 23010047 chr2L 10482512..10482800 271..559 1445 100 Plus
chr2L 23010047 chr2L 10484082..10484355 1600..1873 1370 100 Plus
chr2L 23010047 chr2L 10484420..10484685 1872..2137 1330 100 Plus
chr2L 23010047 chr2L 10482862..10483021 560..719 800 100 Plus
chr2L 23010047 chr2L 10482312..10482456 129..273 725 100 Plus
chr2L 23010047 chr2L 10482127..10482255 1..129 645 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-17 00:17:36
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 10484253..10484760 719..1226 2540 100 Plus
2L 23513712 2L 10484823..10485199 1225..1601 1885 100 Plus
2L 23513712 2L 10483684..10483972 271..559 1445 100 Plus
2L 23513712 2L 10485254..10485527 1600..1873 1370 100 Plus
2L 23513712 2L 10485592..10485859 1872..2139 1340 100 Plus
2L 23513712 2L 10484034..10484193 560..719 800 100 Plus
2L 23513712 2L 10483484..10483628 129..273 725 100 Plus
2L 23513712 2L 10483299..10483427 1..129 645 100 Plus
Blast to na_te.dros performed on 2019-03-17 00:17:36 has no hits.

FI23926.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-17 00:18:39 Download gff for FI23926.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 10482862..10483021 560..719 100 -> Plus
chr2L 10482127..10482254 1..128 100 -> Plus
chr2L 10482312..10482456 129..273 100 -> Plus
chr2L 10482515..10482800 274..559 100 -> Plus
chr2L 10483082..10483588 720..1226 100 -> Plus
chr2L 10483653..10484025 1227..1599 99 -> Plus
chr2L 10484082..10484355 1600..1873 100 -> Plus
chr2L 10484422..10484685 1874..2137 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-23 16:31:15 Download gff for FI23926.complete
Subject Subject Range Query Range Percent Splice Strand
Grip75-RA 1..1953 60..2012 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:18:53 Download gff for FI23926.complete
Subject Subject Range Query Range Percent Splice Strand
Grip75-RA 1..1953 60..2012 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 16:31:15 Download gff for FI23926.complete
Subject Subject Range Query Range Percent Splice Strand
Grip75-RA 5..2141 1..2137 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:18:53 Download gff for FI23926.complete
Subject Subject Range Query Range Percent Splice Strand
Grip75-RA 5..2141 1..2137 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 00:18:39 Download gff for FI23926.complete
Subject Subject Range Query Range Percent Splice Strand
2L 10483299..10483426 1..128 100 -> Plus
2L 10483484..10483628 129..273 100 -> Plus
2L 10483687..10483972 274..559 100 -> Plus
2L 10484034..10484193 560..719 100 -> Plus
2L 10484254..10484760 720..1226 100 -> Plus
2L 10484825..10485197 1227..1599 100 -> Plus
2L 10485254..10485527 1600..1873 100 -> Plus
2L 10485594..10485857 1874..2137 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 00:18:39 Download gff for FI23926.complete
Subject Subject Range Query Range Percent Splice Strand
2L 10483299..10483426 1..128 100 -> Plus
2L 10483484..10483628 129..273 100 -> Plus
2L 10483687..10483972 274..559 100 -> Plus
2L 10484034..10484193 560..719 100 -> Plus
2L 10484254..10484760 720..1226 100 -> Plus
2L 10484825..10485197 1227..1599 100 -> Plus
2L 10485254..10485527 1600..1873 100 -> Plus
2L 10485594..10485857 1874..2137 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 00:18:39 Download gff for FI23926.complete
Subject Subject Range Query Range Percent Splice Strand
2L 10483299..10483426 1..128 100 -> Plus
2L 10483484..10483628 129..273 100 -> Plus
2L 10483687..10483972 274..559 100 -> Plus
2L 10484034..10484193 560..719 100 -> Plus
2L 10484254..10484760 720..1226 100 -> Plus
2L 10484825..10485197 1227..1599 100 -> Plus
2L 10485254..10485527 1600..1873 100 -> Plus
2L 10485594..10485857 1874..2137 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 16:31:15 Download gff for FI23926.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 10483299..10483426 1..128 100 -> Plus
arm_2L 10483484..10483628 129..273 100 -> Plus
arm_2L 10483687..10483972 274..559 100 -> Plus
arm_2L 10484034..10484193 560..719 100 -> Plus
arm_2L 10484254..10484760 720..1226 100 -> Plus
arm_2L 10484825..10485197 1227..1599 100 -> Plus
arm_2L 10485254..10485527 1600..1873 100 -> Plus
arm_2L 10485594..10485857 1874..2137 100   Plus

FI23926.hyp Sequence

Translation from 59 to 2011

> FI23926.hyp
MIHDLLLACRSHNPEQLGIKAFNETTVIDQFIHPCEREIFMDIIKIIKVY
QEVEQFTHSSGRKSDTHGELPDSLHGYYLLNLAKGIEMALEEYYAEIGRL
EKYCLGNERNSLSYVYNALYAKFPLLVFMRNLITEIHVLNLRGCVLLHNL
HQQCEHGDIQLEKAIKIIMKPVKNAFFSSLAHWLLFGVIDDVHSEFFIKF
TPTDAVDGSSFSKSATCSLLSAEKNPEDYIWQYEVNMSQLPGFFSIVLAE
KVLFVGQTVLVFKMGRNVKVKNKTDPLAAKLAELDSDDIYQLWSGRESEF
FKMVVDLSNEDTINVFRLEKVIIDIKNYVSARLSEIAVNEVDLERQMGLI
KDFFLLGRGEFYLEFCSQMVGTMETYREERFKNVTRSFELAATVTGITDD
LDKFSLICQRSTSEPDDTSDFNFLQGLSLKYEYEWPLNLLFSPTTIERYN
NIFRFLLIIRTYQYEIQRVWAKQTWRAKSAKDVPPNNKIITLRNYLMFFL
NNMQYYIQVDVLESQFGILMNVIKSRSDFEVIQRAHTVFLANVLSHCFLL
NESETQLNVTGSQNRNPIYGTLLKLFGICEKFAHMTQTKDPSDDLEDEVD
QLNESFGVQIASLIQLLVDVKSASCLGPLSQLLLRLDFNCWFSASHNTSA
*

FI23926.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:59:58
Subject Length Description Subject Range Query Range Score Percent Strand
Grip75-PA 650 CG6176-PA 1..650 1..650 3368 100 Plus
Grip84-PF 819 CG3917-PF 274..806 76..643 250 19.9 Plus
Grip84-PC 819 CG3917-PC 274..806 76..643 250 19.9 Plus
Grip84-PE 893 CG3917-PE 348..880 76..643 250 19.9 Plus
Grip84-PB 852 CG3917-PB 274..777 76..603 219 20 Plus

FI23926.pep Sequence

Translation from 59 to 2011

> FI23926.pep
MIHDLLLACRSHNPEQLGIKAFNETTVIDQFIHPCEREIFMDIIKIIKVY
QEVEQFTHSSGRKSDTHGELPDSLHGYYLLNLAKGIEMALEEYYAEIGRL
EKYCLGNERNSLSYVYNALYAKFPLLVFMRNLITEIHVLNLRGCVLLHNL
HQQCEHGDIQLEKAIKIIMKPVKNAFFSSLAHWLLFGVIDDVHSEFFIKF
TPTDAVDGSSFSKSATCSLLSAEKNPEDYIWQYEVNMSQLPGFFSIVLAE
KVLFVGQTVLVFKMGRNVKVKNKTDPLAAKLAELDSDDIYQLWSGRESEF
FKMVVDLSNEDTINVFRLEKVIIDIKNYVSARLSEIAVNEVDLERQMGLI
KDFFLLGRGEFYLEFCSQMVGTMETYREERFKNVTRSFELAATVTGITDD
LDKFSLICQRSTSEPDDTSDFNFLQGLSLKYEYEWPLNLLFSPTTIERYN
NIFRFLLIIRTYQYEIQRVWAKQTWRAKSAKDVPPNNKIITLRNYLMFFL
NNMQYYIQVDVLESQFGILMNVIKSRSDFEVIQRAHTVFLANVLSHCFLL
NESETQLNVTGSQNRNPIYGTLLKLFGICEKFAHMTQTKDPSDDLEDEVD
QLNESFGVQIASLIQLLVDVKSASCLGPLSQLLLRLDFNCWFSASHNTSA
*

FI23926.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:50:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF15797-PA 662 GF15797-PA 1..651 1..643 2032 60 Plus
Dana\GF20484-PA 927 GF20484-PA 415..845 124..587 217 22.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:50:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG23645-PA 649 GG23645-PA 1..648 1..649 2929 85.1 Plus
Dere\GG18049-PA 964 GG18049-PA 320..856 2..587 221 21.2 Plus
Dere\GG19490-PA 885 GG19490-PA 352..724 142..549 159 19.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:50:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH13619-PA 650 GH13619-PA 1..641 1..644 1619 50.8 Plus
Dgri\GH16357-PA 746 GH16357-PA 279..739 133..643 196 21.6 Plus
Dgri\GH17863-PA 946 GH17863-PA 363..837 76..587 195 20 Plus
Dgri\GH16605-PA 689 GH16605-PA 161..682 82..637 156 19.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:11:37
Subject Length Description Subject Range Query Range Score Percent Strand
Grip75-PA 650 CG6176-PA 1..650 1..650 3368 100 Plus
Grip84-PF 819 CG3917-PF 274..806 76..643 250 19.9 Plus
Grip84-PC 819 CG3917-PC 274..806 76..643 250 19.9 Plus
Grip84-PE 893 CG3917-PE 348..880 76..643 250 19.9 Plus
Grip84-PB 852 CG3917-PB 274..777 76..603 219 20 Plus
Grip84-PA 926 CG3917-PA 348..851 76..603 219 20 Plus
Grip84-PD 833 CG3917-PD 348..821 76..587 217 20.2 Plus
Grip91-PA 917 CG10988-PA 387..766 142..556 188 19.2 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:50:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI20542-PA 648 GI20542-PA 1..646 1..650 1667 51.1 Plus
Dmoj\GI16432-PA 924 GI16432-PA 337..815 64..587 184 20.8 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:50:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL19136-PA 660 GL19136-PA 1..660 1..649 1981 59 Plus
Dper\GL14777-PA 935 GL14777-PA 396..826 124..587 200 21.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:50:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA29149-PB 690 GA29149-PB 1..615 1..604 1784 57.6 Plus
Dpse\GA17771-PA 935 GA17771-PA 396..826 124..587 203 21.1 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:50:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM18480-PA 656 GM18480-PA 1..656 1..650 3292 93.9 Plus
Dsec\GM22736-PA 926 GM22736-PA 387..821 119..587 204 21.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:50:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD23710-PA 642 GD23710-PA 1..642 1..650 3151 90.9 Plus
Dsim\GD15576-PA 819 GD15576-PA 375..809 119..587 209 21.7 Plus
Dsim\GD15876-PA 886 GD15876-PA 356..735 142..556 176 19.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:50:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13883-PA 657 GJ13883-PA 1..647 1..644 1745 54 Plus
Dvir\GJ15836-PA 1024 GJ15836-PA 497..915 133..587 188 21.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:50:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK14885-PA 660 GK14885-PA 1..654 1..648 1713 53 Plus
Dwil\GK25106-PA 943 GK25106-PA 348..830 64..591 190 20.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:50:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE18465-PA 649 GE18465-PA 1..649 1..650 2868 83.2 Plus
Dyak\GE17380-PA 945 GE17380-PA 301..837 2..587 218 20.8 Plus
Dyak\GE16142-PA 891 GE16142-PA 355..739 142..561 164 19.1 Plus