Clone FI23935 Report

Search the DGRC for FI23935

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:239
Well:35
Vector:pFlc-1|pBS SK-
Associated Gene/TranscriptCG9257-RA
Protein status:FI23935.pep: gold
Sequenced Size:1599

Clone Sequence Records

FI23935.complete Sequence

1599 bp assembled on 2013-08-23

GenBank Submission: BT150221.1

> FI23935.complete
GAGTGTATATTTCTATACGAGTTTGTAAATGGATTTATTCCGGCCCCGAA
AACCTGTCAGTAATAGCTAGGCGACGGAATTTGCCGAGGATTCAATACCG
GAAAATAAAGCGGCCAGAAAAGAGGCTTCGCGAAGCAAGGGAAATGCAGC
AAGGCGAACTCCGGCGCAAAAAAACAACAACAATTGCTGACATGTGCAAC
GTAGCATGCAAAACGGGGATTTTCCGGAACTACTTGCGGGCAAGTGGCCA
AAGGACCTGGATGTCGGTGCTCCTGGTGCTCGTCCTTATGGGTACCTTCA
CAGCCGCGGAACCCCTGAAAGTTATATACGCGGTCAACGCTGGCGGAGAT
GAGCACACCGATCTTAACGGGGTCCAATACGATGCGGATCCTCTCAAAGG
AGTTGGAATAGCTTCGGACTACGGCAAACACCTGCTGATGATCGGCCGGG
TACAGGAACATGACGAGGTGCTCTACAGGACCGAGCGGTATCACACCACT
ACATTTGGGTACGATTTACCAAGCGATGGCGATGGAGATTACGCCTTGAT
AATGAAGTTCTGTGAGGTATACTTTGATGCGCCGCAGAAGAAGGTTTTCG
ATGTGCTCCTAAACCGCAAGCACACGGTTGTCCGCCAGCTGGACATCTAC
AACGAGGTGGGCAGGGGCTCGGCACACGACGAGATTGTGTACTTTAAGAT
CAACAACGGACGATTAAACTATGAAGGCGAGGTGTCCGATGTGCGAAATG
GCCGCCTCCGGCTGGACTTTATAAAGGGGGCACTGGATAATCCCAAGATC
AATGCATTCGCCCTGCTCAAGGGAGATATCTCCCAGGTGCCACGAATGCA
TGGTACCGAGGCGACTGAGAGGATTAAACCGGAGGGTAAGCTGAACGCGG
AACAGAAGAAAGCTCAGCAGGTAGAGAGGGTGGTGCGCAACCAGCGGGAC
GACATTGATGAGGATGACGAGGACCTGGACGACGAAGAGTTTGAAGAGGA
GCTTTCCGAGCAGAATGTCGACAAGCTGGGCAGCGATCAGCCGTCGCTGC
AATCGGACACAAAGCGGTCTTACAGTGGCCCCCGCCAACCGAATCCATAC
TCCATGGACGACTCATCGATCTTGCTACCAGTTTTCATCGCCATCGGGGC
CTTTATACCACTGCTGTTCTGCCTCTGCAAGCTGTGATCCCCATCCGTTG
CTCACTCAACGCTTTCGCCTGCGTTGGTTTCCTGCTTTGTGATTTTGTGA
TTTTGATAAAAGACTTAATTATATACTTATCGTTTAGTTCGTACGTTACG
CACTCCTTAGAGTTCGGTTCCCTTATTCCCAGGATGCAAAGCTCTCTAAC
GCCCTGTACTTTCCATATTTGATAAGCAATTCTTTTGTGTTCTTCTCGTT
GACCACTGCCGTCCCAGGCTCGTGTACTTAATCGTTGAGTCACTTGATTT
CAATTCCCGGATCGTTTGACCGCTTGACTAGGACAATGTGCGCAAAAGGT
TAGATCGGTTTTTGAGACAGTTTTTGCTTGGGAACTGTTGGTTTTGAATG
ACATTGAATAAAATTAACCTTGTTTGTTATTGAAAAAAAAAAAAAAAAA

FI23935.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-17 00:17:51
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 21101233..21102811 4..1582 7850 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-17 00:17:50
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 21102743..21104329 4..1590 7920 99.9 Plus
Blast to na_te.dros performed on 2019-03-17 00:17:50 has no hits.

FI23935.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-17 00:18:46 Download gff for FI23935.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 21101229..21102811 1..1582 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-23 17:20:45 Download gff for FI23935.complete
Subject Subject Range Query Range Percent Splice Strand
CG9257-RA 1..1044 144..1187 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:19:08 Download gff for FI23935.complete
Subject Subject Range Query Range Percent Splice Strand
CG9257-RA 1..1044 144..1187 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 17:20:45 Download gff for FI23935.complete
Subject Subject Range Query Range Percent Splice Strand
CG9257-RA 1..1579 4..1582 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:19:08 Download gff for FI23935.complete
Subject Subject Range Query Range Percent Splice Strand
CG9257-RA 1..1579 4..1582 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 00:18:46 Download gff for FI23935.complete
Subject Subject Range Query Range Percent Splice Strand
2L 21102739..21104321 1..1582 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 00:18:46 Download gff for FI23935.complete
Subject Subject Range Query Range Percent Splice Strand
2L 21102739..21104321 1..1582 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 00:18:46 Download gff for FI23935.complete
Subject Subject Range Query Range Percent Splice Strand
2L 21102739..21104321 1..1582 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 17:20:45 Download gff for FI23935.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 21102739..21104321 1..1582 99   Plus

FI23935.hyp Sequence

Translation from 0 to 1186

> FI23935.hyp
ALYISIRVCKWIYSGPENLSVIARRRNLPRIQYRKIKRPEKRLREAREMQ
QGELRRKKTTTIADMCNVACKTGIFRNYLRASGQRTWMSVLLVLVLMGTF
TAAEPLKVIYAVNAGGDEHTDLNGVQYDADPLKGVGIASDYGKHLLMIGR
VQEHDEVLYRTERYHTTTFGYDLPSDGDGDYALIMKFCEVYFDAPQKKVF
DVLLNRKHTVVRQLDIYNEVGRGSAHDEIVYFKINNGRLNYEGEVSDVRN
GRLRLDFIKGALDNPKINAFALLKGDISQVPRMHGTEATERIKPEGKLNA
EQKKAQQVERVVRNQRDDIDEDDEDLDDEEFEEELSEQNVDKLGSDQPSL
QSDTKRSYSGPRQPNPYSMDDSSILLPVFIAIGAFIPLLFCLCKL*

FI23935.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:00:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG9257-PA 347 CG9257-PA 1..347 49..395 1810 100 Plus

FI23935.pep Sequence

Translation from 2 to 1186

> FI23935.pep
VYISIRVCKWIYSGPENLSVIARRRNLPRIQYRKIKRPEKRLREAREMQQ
GELRRKKTTTIADMCNVACKTGIFRNYLRASGQRTWMSVLLVLVLMGTFT
AAEPLKVIYAVNAGGDEHTDLNGVQYDADPLKGVGIASDYGKHLLMIGRV
QEHDEVLYRTERYHTTTFGYDLPSDGDGDYALIMKFCEVYFDAPQKKVFD
VLLNRKHTVVRQLDIYNEVGRGSAHDEIVYFKINNGRLNYEGEVSDVRNG
RLRLDFIKGALDNPKINAFALLKGDISQVPRMHGTEATERIKPEGKLNAE
QKKAQQVERVVRNQRDDIDEDDEDLDDEEFEEELSEQNVDKLGSDQPSLQ
SDTKRSYSGPRQPNPYSMDDSSILLPVFIAIGAFIPLLFCLCKL*

FI23935.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:51:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF21074-PA 348 GF21074-PA 2..348 50..394 1343 79.6 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:51:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG21278-PA 347 GG21278-PA 1..347 48..394 1600 91.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:51:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH10409-PA 347 GH10409-PA 1..347 64..394 1063 64.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:19:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG9257-PA 347 CG9257-PA 1..347 48..394 1810 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:51:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI23293-PA 331 GI23293-PA 6..331 89..394 1039 66.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:51:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL25887-PA 378 GL25887-PA 15..267 63..315 932 70.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:51:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA21649-PA 350 GA21649-PA 15..350 63..394 1089 64.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:51:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM23391-PA 331 GM23391-PA 1..331 64..394 1565 95.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:51:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD24300-PA 331 GD24300-PA 1..331 64..394 1709 96.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:51:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ23801-PA 340 GJ23801-PA 16..238 102..315 867 76.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:51:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK24317-PA 362 GK24317-PA 2..362 71..394 1110 62.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:51:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE12895-PA 331 GE12895-PA 1..331 64..394 1536 92.4 Plus