Clone FI23937 Report

Search the DGRC for FI23937

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:239
Well:37
Vector:pFlc-1|pBS SK-
Associated Gene/TranscriptCG1749-RA
Protein status:FI23937.pep: gold
Sequenced Size:1459

Clone Sequence Records

FI23937.complete Sequence

1459 bp assembled on 2013-08-22

GenBank Submission: BT150207.1

> FI23937.complete
AAGTACCAAACTAATTTGGCCATCTGGCAGCACTGGTCAAAAGTGACACG
GCGACAACCAGCTTAAAAGCGAAAGTTAACAATTAACAATTGCTGGCGTC
CATAGCCAAACACACGAGCCAGAAACTGGAGCCACCCCAAAGCCAGAATG
TCGCACGCCATCGACGAGCTGCAGGCGATCATCGCCGATCTGAAGACGGA
GCTGGAGACGGAGCCGAAATCCAGTGGCGGCGTCGCTAGCAACAGCCGCC
TGGCACGCGATCGCATCGATCGCATGTCCGCCGAGGTGGTGGACTCCAAT
CCGTACAGCCGCCTGATGGCCCTGCAGCGGATGAACATCGTCAAGGACTA
CGAGCGCATTCGCTACAAGGCGGTGGCCATTGTGGGCGTGGGCGGCGTGG
GAAGCGTCACCGCCGACATGCTTACACGCTGCGGCATTGGCAAACTGATA
CTCTTCGACTACGACAAAGTGGAGCTGGCCAACATGAACAGACTGTTCTT
TACGCCCGATCAGGCGGGCCTCTCCAAAGTTGCGGCCGCCGCCGCTACCC
TGAGCTTTATCAATCCGGACGTGGAGATTGAGACGCACAACTACAATATT
ACAACGGTGGAGAACTTTGATCGCTTCCTGGACACAATATCGCAGGGCGG
ACGGATAGCTGGCCAGCCGGTGGATCTGGTGCTCAGCTGTGTGGACAATT
TTGAGGCACGAATGGCAATCAATGCAGCGTGCAATGAACGCAATCTCAAC
TGGTTTGAGTCGGGAGTTTCGGAAAATGCCGTCTCGGGGCACATTCAGTT
TATCCGTCCTGGCGATACCGCCTGTTTCGCTTGTGCACCACCCTTGGTGG
TGGCCGAGAACATCGACGAGAAGACGCTGAAGAGAGAGGGCGTGTGCGCC
GCTTCATTGCCCACAACTATGGGCATTACGGCTGGCTTCCTTGTCCAGAA
CGCATTAAAGTATCTGCTGAATTTCGGCGAGGTCTCTGACTATCTGGGCT
ACAATGCCCTTAGCGACTTCTTTCCCAAGATGACGCTCAAACCGAATCCG
CAGTGCGATGACAGAAACTGTTTAGTTCGGCAAAAAGAGTTCCAAGCCAG
GCCCAAACCTGTGCTGATCGAAGAGAAGGCAGTCAGCGAAGAGCCGCTGC
ATGCCACCAACGAATGGGGCATCGAACTGGTCGCCGAGGATGCGCCAGAA
AGTAATACAACGCCCGCCGAAACCCCAGTGATGGGTGAAGGGCTGAGGCT
CGCCTACGAGGCTCCTGAGAAGTCCAGCGAAACGTCAGAGGAAACTGTAT
CTGCAGCTACCGCGGACGAAACCAGTCTGGAAGACCTGATGGCGCAAATG
AAGTCCATGTAAATTGATTCCGTACTCCGTATTTATAGACACTTTTTGTA
AAACACACACTTTTTTTTTGATAAACTCAGCTTCGATTTGTGCAAAAAAA
AAAAAAAAA

FI23937.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-17 00:16:29
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 11375241..11376256 428..1442 5030 99.9 Plus
chrX 22417052 chrX 11374703..11375135 1..433 2135 99.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-17 00:16:28
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 11484045..11485064 428..1447 5085 99.9 Plus
X 23542271 X 11483507..11483939 1..433 2135 99.5 Plus
Blast to na_te.dros performed on 2019-03-17 00:16:28 has no hits.

FI23937.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-17 00:17:11 Download gff for FI23937.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 11374703..11375130 1..428 99 -> Plus
chrX 11375242..11376256 429..1443 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-22 16:42:09 Download gff for FI23937.complete
Subject Subject Range Query Range Percent Splice Strand
CG1749-RA 1..1215 148..1362 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:18:30 Download gff for FI23937.complete
Subject Subject Range Query Range Percent Splice Strand
CG1749-RA 1..1215 148..1362 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 16:42:09 Download gff for FI23937.complete
Subject Subject Range Query Range Percent Splice Strand
CG1749-RA 1..1431 12..1443 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:18:30 Download gff for FI23937.complete
Subject Subject Range Query Range Percent Splice Strand
CG1749-RA 1..1431 12..1443 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 00:17:11 Download gff for FI23937.complete
Subject Subject Range Query Range Percent Splice Strand
X 11483507..11483934 1..428 99 -> Plus
X 11484046..11485059 429..1443 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 00:17:11 Download gff for FI23937.complete
Subject Subject Range Query Range Percent Splice Strand
X 11483507..11483934 1..428 99 -> Plus
X 11484046..11485059 429..1443 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 00:17:11 Download gff for FI23937.complete
Subject Subject Range Query Range Percent Splice Strand
X 11483507..11483934 1..428 99 -> Plus
X 11484046..11485059 429..1443 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 16:42:09 Download gff for FI23937.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 11377540..11377967 1..428 99 -> Plus
arm_X 11378079..11379092 429..1443 99   Plus

FI23937.hyp Sequence

Translation from 147 to 1361

> FI23937.hyp
MSHAIDELQAIIADLKTELETEPKSSGGVASNSRLARDRIDRMSAEVVDS
NPYSRLMALQRMNIVKDYERIRYKAVAIVGVGGVGSVTADMLTRCGIGKL
ILFDYDKVELANMNRLFFTPDQAGLSKVAAAAATLSFINPDVEIETHNYN
ITTVENFDRFLDTISQGGRIAGQPVDLVLSCVDNFEARMAINAACNERNL
NWFESGVSENAVSGHIQFIRPGDTACFACAPPLVVAENIDEKTLKREGVC
AASLPTTMGITAGFLVQNALKYLLNFGEVSDYLGYNALSDFFPKMTLKPN
PQCDDRNCLVRQKEFQARPKPVLIEEKAVSEEPLHATNEWGIELVAEDAP
ESNTTPAETPVMGEGLRLAYEAPEKSSETSEETVSAATADETSLEDLMAQ
MKSM*

FI23937.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:59:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG1749-PA 404 CG1749-PA 1..404 1..404 2061 100 Plus
Uba2-PA 700 CG7528-PA 15..165 69..231 192 29.3 Plus
CG13090-PC 453 CG13090-PC 34..202 5..195 175 30.7 Plus
CG13090-PB 453 CG13090-PB 34..202 5..195 175 30.7 Plus
CG13090-PA 453 CG13090-PA 34..202 5..195 175 30.7 Plus

FI23937.pep Sequence

Translation from 147 to 1361

> FI23937.pep
MSHAIDELQAIIADLKTELETEPKSSGGVASNSRLARDRIDRMSAEVVDS
NPYSRLMALQRMNIVKDYERIRYKAVAIVGVGGVGSVTADMLTRCGIGKL
ILFDYDKVELANMNRLFFTPDQAGLSKVAAAAATLSFINPDVEIETHNYN
ITTVENFDRFLDTISQGGRIAGQPVDLVLSCVDNFEARMAINAACNERNL
NWFESGVSENAVSGHIQFIRPGDTACFACAPPLVVAENIDEKTLKREGVC
AASLPTTMGITAGFLVQNALKYLLNFGEVSDYLGYNALSDFFPKMTLKPN
PQCDDRNCLVRQKEFQARPKPVLIEEKAVSEEPLHATNEWGIELVAEDAP
ESNTTPAETPVMGEGLRLAYEAPEKSSETSEETVSAATADETSLEDLMAQ
MKSM*

FI23937.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:51:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF23479-PA 396 GF23479-PA 1..396 1..404 1673 82.7 Plus
Dana\GF10481-PA 691 GF10481-PA 15..165 69..231 192 29.3 Plus
Dana\GF15533-PA 451 GF15533-PA 24..236 4..233 187 29 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:51:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG18422-PA 402 GG18422-PA 1..402 1..404 1840 88.1 Plus
Dere\GG18423-PA 84 GG18423-PA 1..82 113..194 391 89 Plus
Dere\GG14919-PA 703 GG14919-PA 15..165 69..231 195 29.3 Plus
Dere\GG25291-PA 455 GG25291-PA 57..308 26..303 184 26.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:51:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH12371-PA 398 GH12371-PA 1..398 1..404 1645 80.8 Plus
Dgri\GH15287-PA 707 GH15287-PA 15..165 69..231 195 29.3 Plus
Dgri\GH10959-PA 449 GH10959-PA 19..197 5..195 185 33.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:31:18
Subject Length Description Subject Range Query Range Score Percent Strand
Uba5-PA 404 CG1749-PA 1..404 1..404 2061 100 Plus
Uba2-PA 700 CG7528-PA 15..165 69..231 192 29.3 Plus
Uba4-PC 453 CG13090-PC 34..202 5..195 175 30.7 Plus
Uba4-PB 453 CG13090-PB 34..202 5..195 175 30.7 Plus
Uba4-PA 453 CG13090-PA 34..202 5..195 175 30.7 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:51:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI14749-PA 399 GI14749-PA 1..399 1..404 1649 81.6 Plus
Dmoj\GI11997-PA 700 GI11997-PA 15..165 69..231 191 29.3 Plus
Dmoj\GI10453-PA 452 GI10453-PA 55..200 37..196 155 31.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:52:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL19893-PA 384 GL19893-PA 1..384 1..404 1597 78.4 Plus
Dper\GL22481-PA 687 GL22481-PA 15..165 69..231 199 30.5 Plus
Dper\GL26133-PA 451 GL26133-PA 30..277 3..279 197 27 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:52:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA14526-PA 397 GA14526-PA 1..397 1..404 1691 81.6 Plus
Dpse\GA28325-PA 147 GA28325-PA 1..147 258..404 602 77.3 Plus
Dpse\GA20416-PA 697 GA20416-PA 15..165 69..231 201 29.9 Plus
Dpse\GA24966-PA 451 GA24966-PA 30..277 3..279 197 27 Plus
Dpse\GA12041-PA 451 GA12041-PA 30..277 3..279 196 27 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:52:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM13085-PA 404 GM13085-PA 1..404 1..404 2121 98.3 Plus
Dsec\GM24970-PA 701 GM24970-PA 15..165 69..231 195 29.3 Plus
Dsec\GM17034-PA 453 GM17034-PA 55..238 26..233 189 31.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:52:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD17028-PA 391 GD17028-PA 1..391 1..404 2014 94.6 Plus
Dsim\GD13019-PA 701 GD13019-PA 15..165 69..231 195 29.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:52:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ19153-PA 400 GJ19153-PA 1..400 1..404 1670 81.4 Plus
Dvir\GJ12222-PA 697 GJ12222-PA 15..165 69..231 193 29.3 Plus
Dvir\GJ21670-PA 452 GJ21670-PA 70..200 53..195 161 34 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:52:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK10218-PA 406 GK10218-PA 3..406 4..404 1638 81.4 Plus
Dwil\GK19989-PA 747 GK19989-PA 15..165 69..231 188 29.3 Plus
Dwil\GK18675-PA 457 GK18675-PA 73..203 53..195 167 32.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:52:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE15940-PA 403 GE15940-PA 1..403 1..404 2012 95.8 Plus
Dyak\GE20372-PA 705 GE20372-PA 15..165 69..231 195 29.3 Plus
Dyak\GE18783-PA 453 GE18783-PA 55..306 26..303 183 27.1 Plus