Clone FI23938 Report

Search the DGRC for FI23938

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:239
Well:38
Vector:pFlc-1|pBS SK-
Associated Gene/TranscriptCG9149-RA
Protein status:FI23938.pep: gold
Sequenced Size:1450

Clone Sequence Records

FI23938.complete Sequence

1450 bp assembled on 2013-08-22

GenBank Submission: BT150211.1

> FI23938.complete
ACCTGGTCACACTTCTGGCAGCAAATAATACAATTTCGAAAATTAGAATT
TATTTGCTGCTCAATAGCCAAGTCAATAACACCTGTTCCTTGCCCATCCA
GAATGTCTGACGTGTTCATCGTGTCCGCCGCCCGCACGCCCATTGGTAGC
TTCAATGGAACGCTTTCTAAACTGAAGGCCTCCGACCTGGGCAGCGTGGT
CATCCAGGAGGTACTCCGGCGGGCGAATGTGGAGGGCCAGGAGGTCAACG
AAGTCATCTTGGGCCAGGCTCTAAGCGCCGGTCAGGGTCAGAATCCAGCA
CGTCAGGCTTCACTCAAGGCGGGTCTGCCCATTCAGGTGCCAGCCTACGG
CATAAACATGCTATGTGGTTCCGGCTTAAAAACTGTAGCGCTGGGTTACC
AGGCCATCCGCTCGGGAGACGCACAGATTGTTGTGGCAGGAGGTCAGGAG
AGCATGTCCCTGGCTCCACACGTCATGCATCTGCGGCAGGGCGTCAAAAT
GGGTCCGGGCACTATGGTGGACTCGATGATCCACGACGGCCTAACCGATG
CCATGGAGAACATACACATGGGCATCACTGCCGAGAATCTGGCCGATAAG
TATAACATCAGTCGTGAGGCCCAGGATGCCTATGCCGTGCTGTCGCAAAA
TCGAGCCGAGGAGGCCCAAAAAAAGGGTTACTTCGACAAGGAGATTGTGC
CCGTGGAGATCAAGGATCGCAAGGGTACGACCACATTCAGCAAGGATGAG
TACATCAAGGCGGGCAGCACCGTCGAGGGTATACAGAAGCTCAGGGCAGC
CTTCAAAGAGGGCGGCTCTATAACCGCTGGCAATGCCTCAGGCGTCAACG
ACTCCGCTGCTGCCGTACTACTGATGTCCGGCGAGGAGGTGGCCAGGAAG
GGTCTTAAGCCGCTGGCTAGGATTGTGGGCTGGACTCAGAGTGGCATTGA
GCCAAAGGTGATGGGACTGGGACCAGTCACAGCTGTGGAAGCATTGCTTC
AAAAGATTAACTGGAAGCGTGAGGAAGTGGATCTTTACGAGCTGAACGAA
GCATTCGCCGCCCAATCACTGGCTGTCCTGCAGGACCTGCAGCTGGATGC
TCAGAAAGTAAATGTCAATGGCGGTGCCATTGCCCTGGGCCACCCGATTG
GAGCTTCAGGTGCCCGTGTCTTGGTCACTTTGCTCTATGCGCTGGAGCGC
ACCGGTGGAAGAAAGGGAATCGCATCGCTCTGCATCGGTGGCGGCATGGG
AATCGCCCTGGCCGTGGAGCGCCTCAGCTAGTCTTAATTCATTGTCATTC
AAGCTATTTATTGCCTTTTCCTGTTTCCCACTTAAGTGTAAAGTTTATTT
CTCTATTCGCGTAGTATTCGCACGTACTTAAAGGCACAACCTCCCAAGTC
GCAAAATCTACTCAATTAAAATTCAATTGAAAGTAAAAAAAAAAAAAAAA

FI23938.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-17 00:16:32
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 1303058..1303488 381..811 2155 100 Plus
chr3L 24539361 chr3L 1303789..1304225 996..1432 2110 98.9 Plus
chr3L 24539361 chr3L 1303546..1303733 809..996 940 100 Plus
chr3L 24539361 chr3L 1302459..1302606 1..148 740 100 Plus
chr3L 24539361 chr3L 1302697..1302820 145..268 620 100 Plus
chr3L 24539361 chr3L 1302889..1303003 266..380 575 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-17 00:16:30
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 1304279..1304715 996..1432 2185 100 Plus
3L 28110227 3L 1303548..1303978 381..811 2155 100 Plus
3L 28110227 3L 1304036..1304223 809..996 940 100 Plus
3L 28110227 3L 1302949..1303096 1..148 740 100 Plus
3L 28110227 3L 1303187..1303310 145..268 620 100 Plus
3L 28110227 3L 1303379..1303493 266..380 575 100 Plus
Blast to na_te.dros performed on 2019-03-17 00:16:30 has no hits.

FI23938.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-17 00:17:13 Download gff for FI23938.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 1302459..1302603 1..145 100 -> Plus
chr3L 1302698..1302819 146..267 100 -> Plus
chr3L 1302891..1303003 268..380 100 -> Plus
chr3L 1303058..1303487 381..810 100 -> Plus
chr3L 1303548..1303733 811..996 100 -> Plus
chr3L 1303790..1304227 997..1434 98   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-22 16:42:12 Download gff for FI23938.complete
Subject Subject Range Query Range Percent Splice Strand
CG9149-RA 1..1179 103..1281 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:18:34 Download gff for FI23938.complete
Subject Subject Range Query Range Percent Splice Strand
CG9149-RA 1..1179 103..1281 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 16:42:12 Download gff for FI23938.complete
Subject Subject Range Query Range Percent Splice Strand
CG9149-RA 6..1439 1..1434 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:18:34 Download gff for FI23938.complete
Subject Subject Range Query Range Percent Splice Strand
CG9149-RA 6..1439 1..1434 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 00:17:13 Download gff for FI23938.complete
Subject Subject Range Query Range Percent Splice Strand
3L 1302949..1303093 1..145 100 -> Plus
3L 1303188..1303309 146..267 100 -> Plus
3L 1303381..1303493 268..380 100 -> Plus
3L 1303548..1303977 381..810 100 -> Plus
3L 1304038..1304223 811..996 100 -> Plus
3L 1304280..1304717 997..1434 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 00:17:13 Download gff for FI23938.complete
Subject Subject Range Query Range Percent Splice Strand
3L 1302949..1303093 1..145 100 -> Plus
3L 1303188..1303309 146..267 100 -> Plus
3L 1303381..1303493 268..380 100 -> Plus
3L 1303548..1303977 381..810 100 -> Plus
3L 1304038..1304223 811..996 100 -> Plus
3L 1304280..1304717 997..1434 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 00:17:13 Download gff for FI23938.complete
Subject Subject Range Query Range Percent Splice Strand
3L 1302949..1303093 1..145 100 -> Plus
3L 1303188..1303309 146..267 100 -> Plus
3L 1303381..1303493 268..380 100 -> Plus
3L 1303548..1303977 381..810 100 -> Plus
3L 1304038..1304223 811..996 100 -> Plus
3L 1304280..1304717 997..1434 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 16:42:12 Download gff for FI23938.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 1302949..1303093 1..145 100 -> Plus
arm_3L 1303188..1303309 146..267 100 -> Plus
arm_3L 1303381..1303493 268..380 100 -> Plus
arm_3L 1303548..1303977 381..810 100 -> Plus
arm_3L 1304038..1304223 811..996 100 -> Plus
arm_3L 1304280..1304717 997..1434 99   Plus

FI23938.hyp Sequence

Translation from 0 to 1280

> FI23938.hyp
TWSHFWQQIIQFRKLEFICCSIAKSITPVPCPSRMSDVFIVSAARTPIGS
FNGTLSKLKASDLGSVVIQEVLRRANVEGQEVNEVILGQALSAGQGQNPA
RQASLKAGLPIQVPAYGINMLCGSGLKTVALGYQAIRSGDAQIVVAGGQE
SMSLAPHVMHLRQGVKMGPGTMVDSMIHDGLTDAMENIHMGITAENLADK
YNISREAQDAYAVLSQNRAEEAQKKGYFDKEIVPVEIKDRKGTTTFSKDE
YIKAGSTVEGIQKLRAAFKEGGSITAGNASGVNDSAAAVLLMSGEEVARK
GLKPLARIVGWTQSGIEPKVMGLGPVTAVEALLQKINWKREEVDLYELNE
AFAAQSLAVLQDLQLDAQKVNVNGGAIALGHPIGASGARVLVTLLYALER
TGGRKGIASLCIGGGMGIALAVERLS*

FI23938.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:59:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG9149-PA 392 CG9149-PA 1..392 35..426 1945 100 Plus
yip2-PA 398 CG4600-PA 8..396 38..423 820 43.4 Plus
CG10932-PB 410 CG10932-PB 20..410 33..425 760 42.1 Plus
CG10932-PA 410 CG10932-PA 20..410 33..425 760 42.1 Plus
Thiolase-PA 469 CG4581-PA 24..462 19..424 454 29.1 Plus

FI23938.pep Sequence

Translation from 0 to 1280

> FI23938.pep
TWSHFWQQIIQFRKLEFICCSIAKSITPVPCPSRMSDVFIVSAARTPIGS
FNGTLSKLKASDLGSVVIQEVLRRANVEGQEVNEVILGQALSAGQGQNPA
RQASLKAGLPIQVPAYGINMLCGSGLKTVALGYQAIRSGDAQIVVAGGQE
SMSLAPHVMHLRQGVKMGPGTMVDSMIHDGLTDAMENIHMGITAENLADK
YNISREAQDAYAVLSQNRAEEAQKKGYFDKEIVPVEIKDRKGTTTFSKDE
YIKAGSTVEGIQKLRAAFKEGGSITAGNASGVNDSAAAVLLMSGEEVARK
GLKPLARIVGWTQSGIEPKVMGLGPVTAVEALLQKINWKREEVDLYELNE
AFAAQSLAVLQDLQLDAQKVNVNGGAIALGHPIGASGARVLVTLLYALER
TGGRKGIASLCIGGGMGIALAVERLS*

FI23938.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:52:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF24451-PA 392 GF24451-PA 1..391 35..425 1799 89.8 Plus
Dana\GF15724-PA 398 GF15724-PA 8..396 38..423 804 42.9 Plus
Dana\GF21242-PA 414 GF21242-PA 24..414 33..425 779 42.8 Plus
Dana\GF12060-PA 470 GF12060-PA 24..463 19..424 451 29.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:52:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG14778-PA 392 GG14778-PA 1..392 35..426 1964 95.9 Plus
Dere\GG10063-PA 398 GG10063-PA 8..396 38..423 805 42.9 Plus
Dere\GG17603-PA 410 GG17603-PA 20..410 33..425 765 42.3 Plus
Dere\GG19986-PA 469 GG19986-PA 20..462 13..424 458 29.1 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:52:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH15449-PA 392 GH15449-PA 1..391 35..425 1676 80.3 Plus
Dgri\GH17897-PA 409 GH17897-PA 18..409 33..425 803 43.9 Plus
Dgri\GH11301-PA 398 GH11301-PA 8..398 38..425 796 41.9 Plus
Dgri\GH20195-PA 405 GH20195-PA 13..398 71..424 410 29.4 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:28:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG9149-PA 392 CG9149-PA 1..392 35..426 1945 100 Plus
yip2-PA 398 CG4600-PA 8..396 38..423 820 43.4 Plus
CG10932-PB 410 CG10932-PB 20..410 33..425 760 42.1 Plus
CG10932-PA 410 CG10932-PA 20..410 33..425 760 42.1 Plus
Thiolase-PA 469 CG4581-PA 24..462 19..424 454 29.1 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:52:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI13050-PA 392 GI13050-PA 1..391 35..425 1733 83.1 Plus
Dmoj\GI17721-PA 398 GI17721-PA 8..396 38..423 803 42.7 Plus
Dmoj\GI15420-PA 408 GI15420-PA 18..408 33..425 784 42.8 Plus
Dmoj\GI20722-PA 469 GI20722-PA 43..462 37..424 439 29.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:52:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL16175-PA 392 GL16175-PA 1..391 35..425 1835 88.5 Plus
Dper\GL18942-PA 398 GL18942-PA 8..396 38..423 830 44.5 Plus
Dper\GL14584-PA 412 GL14584-PA 22..412 33..425 807 44.3 Plus
Dper\GL10924-PA 471 GL10924-PA 22..464 13..424 460 29.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:52:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA21576-PA 392 GA21576-PA 1..391 35..425 1849 89.3 Plus
Dpse\GA18290-PA 398 GA18290-PA 8..396 38..423 830 44.5 Plus
Dpse\GA10651-PA 412 GA10651-PA 22..412 33..425 805 44.3 Plus
Dpse\GA18273-PA 471 GA18273-PA 22..464 13..424 460 29.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:52:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM14397-PA 392 GM14397-PA 1..392 35..426 2009 98.2 Plus
Dsec\GM12955-PA 311 GM12955-PA 1..299 35..333 1540 98.3 Plus
Dsec\GM17755-PA 398 GM17755-PA 8..396 38..423 803 43.2 Plus
Dsec\GM11967-PA 410 GM11967-PA 20..410 33..425 767 42 Plus
Dsec\GM15500-PA 469 GM15500-PA 20..462 13..424 458 29.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:52:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD13606-PA 392 GD13606-PA 1..392 35..426 2014 98.7 Plus
Dsim\GD23636-PA 397 GD23636-PA 8..395 38..423 774 42.9 Plus
Dsim\GD24579-PA 410 GD24579-PA 20..410 33..425 769 42.3 Plus
Dsim\GD25003-PA 469 GD25003-PA 20..462 13..424 458 29.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:52:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ12146-PA 392 GJ12146-PA 1..391 35..425 1802 87.5 Plus
Dvir\GJ17549-PA 398 GJ17549-PA 8..396 38..423 803 43.2 Plus
Dvir\GJ16378-PA 408 GJ16378-PA 18..408 33..425 799 44.1 Plus
Dvir\GJ20459-PA 443 GJ20459-PA 17..436 37..424 442 29.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:52:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK20386-PA 392 GK20386-PA 1..391 35..425 1775 85.7 Plus
Dwil\GK18280-PA 398 GK18280-PA 8..396 38..423 822 43.2 Plus
Dwil\GK10115-PA 413 GK10115-PA 23..413 33..425 803 43.8 Plus
Dwil\GK15863-PA 473 GK15863-PA 47..466 37..424 476 31.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:52:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE21141-PA 392 GE21141-PA 1..392 35..426 1977 96.9 Plus
Dyak\yip2-PA 398 GE18877-PA 8..396 38..423 816 43.2 Plus
Dyak\GE17503-PA 410 GE17503-PA 20..410 33..425 765 42 Plus
Dyak\GE11519-PA 469 GE11519-PA 20..462 13..424 460 29.6 Plus