Clone FI23941 Report

Search the DGRC for FI23941

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:239
Well:41
Vector:pFlc-1|pBS SK-
Associated Gene/TranscriptCG5144-RA
Protein status:FI23941.pep: gold
Sequenced Size:1302

Clone Sequence Records

FI23941.complete Sequence

1302 bp assembled on 2013-08-22

GenBank Submission: BT150212.1

> FI23941.complete
GACTTTCTAACTTAGGGTCAGCCTGGCCGGTGTCATTCCAAATTCAACAC
CTAAAAATGCTGTTACATTTAAAACTCCGGCTTGAACTTCAATTACTAGG
CCGCTGTGCGCAGCTAGTAATCAATCGCCATGCCAGCAAAGGAAATGTGG
ACAAGGAGGTGATGGAGCAAATGGAGAAGGGCTACAAGAAGTTGGCCGAG
TCGAAATCCAAGTCCCTGCTGAAGAAGCATCTCACCAAGGAGATCTTCGA
GAAGCTAAAGACGAAGACTACACCCTCGTTCAACTCCACACTGCTGCACT
GCATCAGTTCGGGAATGTGCAATCATGACTCCGGCGTTGGGCTCTACGCC
CCCGATCCGGAGGCATATAAGGTGTTTGCCGATCTCTTTGATCCCGTCAT
CGAGGAATACCATAAGTGCTTCAAGAAGACGGACAAACAGCCGGCGACTG
CTTTCGGCAAAGGCGCGGATTTTGAAAACCTAGATCCCGATGGCCATTTC
ATCGTATCCACGCGTGTCCGTTGCGGAAGAGCCGTCAAAGGATACCCCTT
CAATCCCTGCTTAACGGAGGCTGACTACATGGAGCTGGAGAGTAAGATTT
GTGGGGCAGTGACTAGCCTCACCGGAGAGTACAAGGGTAAATACATGCCA
TTGACTGGAATGGATAAATGCATACAGGAGCAGCTCATAGAGGATCACTA
TCTGTTCAAGGAGGGCGATCGATTTCTGGCTTCCGCTGGAGCCTCTCGAT
ATTGGCCAACGGGAAGGGGCATCTTTCTGAATAGCGCCAAGAACTTTCTG
GTCTGGTGCAACGAGGAGGACCACATACGCATCATCTCGATGGAGAAGGG
TGGCGACCTGGGCAAGGTCTACGATCGCATGGTTGGCGGCGTGGAGGCTC
TCGGCAAGCAGCTGCAATTCAACAGGGATGAACGACTTGGCTTTTTAACC
TTCTGTCCCACCAATCTGGGCACTTCTATTCGCGCCTCGGTGCACATCAA
GCTGCCCAATCTAATGTGTGATCCCGACGAGATGAAAAAGCTGGCCGACA
AGTATCGTCTACAAATCAGAGGAACCTCGGGCGAGCACTCAGAGGCCAAG
GGCGGAGTGCACGATATATCCAACCAACGCAGGATGGGACTAACCGAATA
CGAAATCATCAAAGAGATGCACGATGGAATCAAGGGTCTCATAGAAGCCG
AGTGTAAGGCAAAGTCAGCTTAGTTGTAAAGCGTGAAGTGTACAAAAGGT
TAAAGGCCGTGATGAACTCTAAATAAATAATAAACCAAAAAAAAAAAAAA
AA

FI23941.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-17 00:16:34
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 9039367..9040650 2..1285 6330 99.5 Plus
chr3L 24539361 chr3L 9041407..9042209 1009..207 340 69.5 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-17 00:16:33
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 9047441..9048728 2..1289 6425 99.9 Plus
3L 28110227 3L 9049481..9050283 1009..207 415 70.1 Minus
Blast to na_te.dros performed on 2019-03-17 00:16:33 has no hits.

FI23941.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-17 00:17:14 Download gff for FI23941.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 9039366..9040650 1..1286 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-22 16:42:16 Download gff for FI23941.complete
Subject Subject Range Query Range Percent Splice Strand
CG5144-RA 1..1167 57..1223 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:18:36 Download gff for FI23941.complete
Subject Subject Range Query Range Percent Splice Strand
CG5144-RA 1..1167 57..1223 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 16:42:16 Download gff for FI23941.complete
Subject Subject Range Query Range Percent Splice Strand
CG5144-RA 2..1286 1..1285 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:18:36 Download gff for FI23941.complete
Subject Subject Range Query Range Percent Splice Strand
CG5144-RA 2..1286 1..1285 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 00:17:14 Download gff for FI23941.complete
Subject Subject Range Query Range Percent Splice Strand
3L 9047440..9048724 1..1286 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 00:17:14 Download gff for FI23941.complete
Subject Subject Range Query Range Percent Splice Strand
3L 9047440..9048724 1..1286 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 00:17:14 Download gff for FI23941.complete
Subject Subject Range Query Range Percent Splice Strand
3L 9047440..9048724 1..1286 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 16:42:16 Download gff for FI23941.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 9040540..9041824 1..1286 99   Plus

FI23941.hyp Sequence

Translation from 2 to 1222

> FI23941.hyp
LSNLGSAWPVSFQIQHLKMLLHLKLRLELQLLGRCAQLVINRHASKGNVD
KEVMEQMEKGYKKLAESKSKSLLKKHLTKEIFEKLKTKTTPSFNSTLLHC
ISSGMCNHDSGVGLYAPDPEAYKVFADLFDPVIEEYHKCFKKTDKQPATA
FGKGADFENLDPDGHFIVSTRVRCGRAVKGYPFNPCLTEADYMELESKIC
GAVTSLTGEYKGKYMPLTGMDKCIQEQLIEDHYLFKEGDRFLASAGASRY
WPTGRGIFLNSAKNFLVWCNEEDHIRIISMEKGGDLGKVYDRMVGGVEAL
GKQLQFNRDERLGFLTFCPTNLGTSIRASVHIKLPNLMCDPDEMKKLADK
YRLQIRGTSGEHSEAKGGVHDISNQRRMGLTEYEIIKEMHDGIKGLIEAE
CKAKSA*

FI23941.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:59:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG5144-PA 388 CG5144-PA 1..388 19..406 2055 100 Plus
Argk-PG 356 CG32031-PG 2..353 49..400 1259 64.2 Plus
Argk-PH 356 CG32031-PH 2..353 49..400 1259 64.2 Plus
Argk-PD 356 CG32031-PD 2..353 49..400 1259 64.2 Plus
Argk-PE 375 CG32031-PE 21..372 49..400 1259 64.2 Plus

FI23941.pep Sequence

Translation from 2 to 1222

> FI23941.pep
LSNLGSAWPVSFQIQHLKMLLHLKLRLELQLLGRCAQLVINRHASKGNVD
KEVMEQMEKGYKKLAESKSKSLLKKHLTKEIFEKLKTKTTPSFNSTLLHC
ISSGMCNHDSGVGLYAPDPEAYKVFADLFDPVIEEYHKCFKKTDKQPATA
FGKGADFENLDPDGHFIVSTRVRCGRAVKGYPFNPCLTEADYMELESKIC
GAVTSLTGEYKGKYMPLTGMDKCIQEQLIEDHYLFKEGDRFLASAGASRY
WPTGRGIFLNSAKNFLVWCNEEDHIRIISMEKGGDLGKVYDRMVGGVEAL
GKQLQFNRDERLGFLTFCPTNLGTSIRASVHIKLPNLMCDPDEMKKLADK
YRLQIRGTSGEHSEAKGGVHDISNQRRMGLTEYEIIKEMHDGIKGLIEAE
CKAKSA*

FI23941.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:52:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF10930-PA 388 GF10930-PA 9..388 26..403 1509 72.6 Plus
Dana\GF23510-PA 568 GF23510-PA 201..565 28..400 1307 62.2 Plus
Dana\GF18548-PA 456 GF18548-PA 84..446 46..400 829 44.1 Plus
Dana\GF13541-PA 469 GF13541-PA 81..439 71..400 266 23.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:52:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG14370-PA 390 GG14370-PA 1..390 19..406 1935 91.8 Plus
Dere\GG15040-PA 563 GG15040-PA 209..560 49..400 1300 63.9 Plus
Dere\GG16959-PA 457 GG16959-PA 92..447 51..400 785 44.1 Plus
Dere\GG22797-PA 468 GG22797-PA 80..438 71..400 260 25 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:52:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH15902-PA 603 GH15902-PA 249..600 49..400 1275 63.4 Plus
Dgri\GH15573-PA 321 GH15573-PA 2..314 90..402 1048 61 Plus
Dgri\GH23455-PA 456 GH23455-PA 92..446 51..400 853 46.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:17:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG5144-PA 388 CG5144-PA 1..388 19..406 2055 100 Plus
Argk-PG 356 CG32031-PG 2..353 49..400 1259 64.2 Plus
Argk-PH 356 CG32031-PH 2..353 49..400 1259 64.2 Plus
Argk-PD 356 CG32031-PD 2..353 49..400 1259 64.2 Plus
Argk-PE 375 CG32031-PE 21..372 49..400 1259 64.2 Plus
Argk-PC 396 CG32031-PC 42..393 49..400 1259 64.2 Plus
Argk-PB 432 CG32031-PB 78..429 49..400 1259 64.2 Plus
Argk-PA 562 CG32031-PA 208..559 49..400 1259 64.2 Plus
CG4546-PA 457 CG4546-PA 92..447 51..400 791 44.4 Plus
CG30274-PA 468 CG30274-PA 80..438 71..400 225 24.5 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:52:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI16555-PA 584 GI16555-PA 230..581 49..400 1301 64.2 Plus
Dmoj\Tes114-PA 360 GI16848-PA 5..355 52..402 1282 65.5 Plus
Dmoj\GI22950-PA 456 GI22950-PA 92..446 51..400 824 45.4 Plus
Dmoj\GI20329-PA 467 GI20329-PA 79..437 71..400 259 24.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:52:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL15035-PA 384 GL15035-PA 14..382 39..403 1418 71.5 Plus
Dper\GL15080-PA 564 GL15080-PA 210..561 49..400 1286 63.6 Plus
Dper\GL22076-PA 456 GL22076-PA 84..452 46..406 895 45.5 Plus
Dper\GL11384-PA 467 GL11384-PA 79..437 71..400 273 25.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:52:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA18688-PA 384 GA18688-PA 14..382 39..403 1418 71.5 Plus
Dpse\GA16624-PA 564 GA16624-PA 210..561 49..400 1287 63.6 Plus
Dpse\GA18246-PA 456 GA18246-PA 84..452 46..406 895 45.5 Plus
Dpse\GA15743-PA 467 GA15743-PA 79..437 71..400 273 25.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:52:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM25115-PA 388 GM25115-PA 1..388 19..406 2027 96.6 Plus
Dsec\GM24893-PA 559 GM24893-PA 205..556 49..400 1299 63.9 Plus
Dsec\GM24266-PA 457 GM24266-PA 92..447 51..400 826 44.4 Plus
Dsec\GM15955-PA 468 GM15955-PA 80..438 71..400 250 24.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:52:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD14150-PA 386 GD14150-PA 1..386 19..406 2008 95.9 Plus
Dsim\GD19054-PA 457 GD19054-PA 92..447 51..400 826 44.4 Plus
Dsim\GD11708-PA 468 GD11708-PA 80..438 71..400 253 24.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:52:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ12598-PA 380 GJ12598-PA 25..378 52..405 1299 64.4 Plus
Dvir\GJ12807-PA 573 GJ12807-PA 219..570 49..400 1298 64.2 Plus
Dvir\GJ23766-PA 456 GJ23766-PA 92..446 51..400 832 45.6 Plus
Dvir\GJ22053-PA 467 GJ22053-PA 79..437 71..400 260 24.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:52:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK24279-PA 392 GK24279-PA 34..391 49..406 1449 72.3 Plus
Dwil\GK23865-PA 570 GK23865-PA 216..567 49..400 1286 63.4 Plus
Dwil\GK11215-PA 456 GK11215-PA 92..446 51..400 882 47.3 Plus
Dwil\GK19395-PA 467 GK19395-PA 79..437 71..400 248 24.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:52:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE20801-PA 390 GE20801-PA 1..390 19..406 1905 90.8 Plus
Dyak\GE21263-PA 565 GE21263-PA 211..562 49..400 1300 63.9 Plus
Dyak\GE24345-PA 457 GE24345-PA 92..447 51..400 817 44.4 Plus
Dyak\GE14027-PA 468 GE14027-PA 80..438 71..400 258 24.5 Plus