Clone FI23988 Report

Search the DGRC for FI23988

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:239
Well:88
Vector:pFlc-1|pBS SK-
Associated Gene/TranscriptCG13082-RA
Protein status:FI23988.pep: gold
Sequenced Size:1344

Clone Sequence Records

FI23988.complete Sequence

1344 bp assembled on 2013-08-23

GenBank Submission: BT150218.1

> FI23988.complete
AGTTGCGAGGCAGAAGCGCGCGAGTCAAGAACGCCGAGCGGACCAATTTG
AGATCTACTAAGTGAAGATGGCCTGGAAGACTTTCACGCTTCTACCCCTG
CTATTGGCAGCAGGTCTAGCTAATCCCTTGAGCTCCACAACGGAGCCATC
TACCCCACCAGCTGCCAATCCTGACGTGCCGCAGATCATAAAGGAGGAGC
ACTTCCCGGCCATGGCCCCGGCCCAGGCTCTGGAGTCCAGCGGATCCAGT
GGGCAACCCATAATGCTGCAACCTCCTCTCGAATCGCCCAGCGCAGATGA
GGACGCACTGCGTCGCCGCACAATCACGTATGATCAGCGCCAGGAGGGGC
AGTACAACATTCGTGCTGATCTGGAGAACTTCATGATCCTCCTGATTCCA
CCTGGACCGCAGGAGGGCATCAGCCTGCTGGAGCTACTGGGTCGCGGAAA
CACCAAGGGCAGTGGATCGCTCAAGCGCAAACATCCCGCGAGGAGCAACT
CACTGAAGTCCTTCTACCAGAAAAGTCAGCTGCAGAAGTTGCAGCAGCAA
CAGAATCAGCGCCAATCCTCGCCAGCGGCGCATCTGCCGGAGTTCATTGA
GGGTCGGTCGCCCTATCACGTGGACATCTCAGCCAGCGATCCGGAGCAGG
CTCAACGCCTGCAGCGCCAGCAGGTGGACGTGCTGCCTCCGCAACTGATA
CCCATGCCGCAGCTAATTAAGCCCTTCCACTTGGAGGCGGAACCGGAGTT
GATTCAAGCTCTGCCCCCCGTCTCCGCCAGCAGCAGTGCCGGTTCTAATC
TCCTCGAGAGCTTCAATCATCCCGGATCGCAGTACTTCCGCAGCTCCCGC
TCCTTGAGAGGCGATAGCTATCTGGATACCAATCGCCTGACCGGCGGCGA
TTATGCCAGTCCGCGCTCCATTAGTGCCCCCATTTACCGCAGCGATCTTG
GCAGAGGAGCCAATGGCCTTTACCCCCCCATCGACGCACCCACCTACTTC
TCGGACCAATCGCGCTCCTGGCAACTGGACGAGGAACCCACTCGGGCACA
AGCGGTGGAACCGGAGATCGTTAGCTTCGATCTGTTGGCCGACGACGACC
TGGCCGAGTCCCGAACCCTCCTCCGGGACGGACTGGCGCGCTGCGCTCGC
GGAGAACGTCGTGATAGCTACGGCGAATGTCGCCAGATCGAGGGCTATTA
AGCGGAGGAGTGAGAACGCCAGACTGCCAGCTTAAATGTTAGTTTCATAC
ATTGCACACTCTAGAATTAAGCCGACGAAATTGTCTTATTAATAAATACG
AAAACATAATCGAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAA

FI23988.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-17 00:17:54
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 19536971..19538283 1..1313 6565 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-17 00:17:52
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 19538429..19539741 1..1313 6565 100 Plus
Blast to na_te.dros performed 2019-03-17 00:17:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2332..2381 516..565 115 70 Plus
gypsy11 4428 gypsy11 GYPSY11 4428bp 978..1037 527..583 113 68.3 Plus

FI23988.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-17 00:18:47 Download gff for FI23988.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 19536971..19538282 1..1312 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-23 17:20:48 Download gff for FI23988.complete
Subject Subject Range Query Range Percent Splice Strand
CG13082-RA 1..1134 68..1201 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:19:09 Download gff for FI23988.complete
Subject Subject Range Query Range Percent Splice Strand
CG13082-RA 1..1134 68..1201 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 17:20:48 Download gff for FI23988.complete
Subject Subject Range Query Range Percent Splice Strand
CG13082-RA 5..1316 1..1312 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:19:09 Download gff for FI23988.complete
Subject Subject Range Query Range Percent Splice Strand
CG13082-RA 5..1316 1..1312 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 00:18:47 Download gff for FI23988.complete
Subject Subject Range Query Range Percent Splice Strand
2L 19538429..19539740 1..1312 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 00:18:47 Download gff for FI23988.complete
Subject Subject Range Query Range Percent Splice Strand
2L 19538429..19539740 1..1312 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 00:18:47 Download gff for FI23988.complete
Subject Subject Range Query Range Percent Splice Strand
2L 19538429..19539740 1..1312 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 17:20:48 Download gff for FI23988.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 19538429..19539740 1..1312 100   Plus

FI23988.hyp Sequence

Translation from 67 to 1200

> FI23988.hyp
MAWKTFTLLPLLLAAGLANPLSSTTEPSTPPAANPDVPQIIKEEHFPAMA
PAQALESSGSSGQPIMLQPPLESPSADEDALRRRTITYDQRQEGQYNIRA
DLENFMILLIPPGPQEGISLLELLGRGNTKGSGSLKRKHPARSNSLKSFY
QKSQLQKLQQQQNQRQSSPAAHLPEFIEGRSPYHVDISASDPEQAQRLQR
QQVDVLPPQLIPMPQLIKPFHLEAEPELIQALPPVSASSSAGSNLLESFN
HPGSQYFRSSRSLRGDSYLDTNRLTGGDYASPRSISAPIYRSDLGRGANG
LYPPIDAPTYFSDQSRSWQLDEEPTRAQAVEPEIVSFDLLADDDLAESRT
LLRDGLARCARGERRDSYGECRQIEGY*

FI23988.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:00:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG13082-PA 377 CG13082-PA 1..377 1..377 1943 100 Plus

FI23988.pep Sequence

Translation from 67 to 1200

> FI23988.pep
MAWKTFTLLPLLLAAGLANPLSSTTEPSTPPAANPDVPQIIKEEHFPAMA
PAQALESSGSSGQPIMLQPPLESPSADEDALRRRTITYDQRQEGQYNIRA
DLENFMILLIPPGPQEGISLLELLGRGNTKGSGSLKRKHPARSNSLKSFY
QKSQLQKLQQQQNQRQSSPAAHLPEFIEGRSPYHVDISASDPEQAQRLQR
QQVDVLPPQLIPMPQLIKPFHLEAEPELIQALPPVSASSSAGSNLLESFN
HPGSQYFRSSRSLRGDSYLDTNRLTGGDYASPRSISAPIYRSDLGRGANG
LYPPIDAPTYFSDQSRSWQLDEEPTRAQAVEPEIVSFDLLADDDLAESRT
LLRDGLARCARGERRDSYGECRQIEGY*

FI23988.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:51:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF14246-PA 387 GF14246-PA 4..387 2..377 1270 71.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:51:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG21193-PA 377 GG21193-PA 1..377 1..377 1765 94.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:51:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH13422-PA 316 GH13422-PA 2..316 78..377 783 57.4 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:09:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG13082-PA 377 CG13082-PA 1..377 1..377 1943 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:51:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI17658-PA 420 GI17658-PA 67..420 37..377 898 58.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:51:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL26086-PA 374 GL26086-PA 1..374 1..377 1150 68.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:51:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA12032-PA 382 GA12032-PA 1..382 1..377 1181 71.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:51:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM17362-PA 377 GM17362-PA 1..377 1..377 1902 97.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:51:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD24220-PA 377 GD24220-PA 1..377 1..377 1916 97.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:51:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ18225-PA 392 GJ18225-PA 50..392 41..377 976 63.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:51:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK24379-PA 393 GK24379-PA 1..393 1..377 1070 60.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:51:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE13267-PA 377 GE13267-PA 1..377 1..377 1767 94.4 Plus