Clone FI24270 Report

Search the DGRC for FI24270

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:242
Well:70
Vector:pOT2|pOTB7_DraIII
Associated Gene/TranscriptCG31380-RA
Protein status:FI24270.pep: gold
Sequenced Size:1353

Clone Sequence Records

FI24270.complete Sequence

1353 bp assembled on 2013-08-26

GenBank Submission: BT150223.1

> FI24270.complete
GTCATGGCAGCTTGGCTCACAGCTGAATACCTGGAAGCGGCACTGCGTCG
GTATTACCAGAACAACGAACTTCGAGTGGAATCGATGGTTATAAATCCCG
CTTTAGGGAAAGGAGAAAACTATGGTGCTATCCTAACACGCATACACCTT
GTGTACAGCAGCATAGTCGAGGAACATCTGATTGCCAAGACTGTTCTAGA
GTATGAAGACGCGGAGACGAAAATGAAGAAAGCCCCATATGATATTTACA
ATCGGGAACTGGAGATTTACGAGCAAGTGTTACCAAAATTGCAGGAACTA
GCCGGCGAGCAACTATGTCCTAAAATACTACACATCGATCGTCAAAGAGG
AGCACTCATAATGGAAGATCTGAGCTACAAGGGATTTGTGATGGCCCCGA
GACTTCAGAGATTGGATGAGCAGCATGTGAGTTTGGTTCTTAGGAAGTTG
GCCAAAATGCAGGCAGCATCAGCGGTTTTGGAGAACAATCTTTTGGAAAA
TAACTTCTCTCTCACTGAATACGATAAAGGCTTCTTCAATAGGTATACAG
AAAGCTTTAGTGCCTACTTTCTGGGCTGCCTCAAGTCCTGTGCCAATTAC
CTTAAAACTCAGGCGGGTTATGAACACCACGCAAAACTATTAGACGAACT
GGCTCCCTATTATATGGGACTAGGACTCCGCTGTTTTAAGCAAGAGCAAA
CGCACATTAATGTCCTTACCCACGGCGACTTGTGGACAAACAACATGATG
TTCAAATACGAGGCGGGCGTGCCGAGCGATGTCCTTCTGATTGACTTTCA
GTACGCCTTCTGGGGTTCGCCCACCCTGGACATCCATCATCTGCTCAACA
CGTCGGCTGTGGAGCAAGTGCGGAGTGAGCTGCAAATGAAGATGAGAGGT
GTCTATCACGATGTCTTCGTGGGGGAGCTGCAGAGACTTGGCTTCAAAGG
TCAAAGGTTGCCCAGTCGAAAGCAGTTTCACCTGGAGTCAGAGCAAAAAC
GATTTTACGCCGTTCATTGTGGCCTGCTGCTGCTACCTGTGCTGCTAAAC
ACCGATGAAACTGATGCGGATTTCGCCGCCCTTCTTTCGGATCAGCCGCG
TGGAATGGATATGAAAAGGCGGCTGTATCTCAACCCTGGCATCCAGGACT
CTATTAAGCAAATGGTGAAGCATTTCGAGCTGGAAGGGCTCCTGGATCCG
TGGCAATACGAAGGCCTCTGAACCTGGTGGAAGCGGATTTTCCGCTTTTT
TCATAAACTCCCCCATTAGACATTTCAATTAGACGAGCTAATAAACATAA
AACATGGCAGCCACAGCCGCAGGCATTTTAAAGCCAAAAAAAAAAAAAAA
AAA

FI24270.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-17 00:18:22
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 21611448..21612456 1009..1 5045 100 Minus
chr3R 27901430 chr3R 21610998..21611324 1335..1009 1620 99.7 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-17 00:18:20
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 25788447..25789455 1009..1 5045 100 Minus
3R 32079331 3R 25787996..25788327 1336..1005 1615 99.1 Minus
Blast to na_te.dros performed on 2019-03-17 00:18:20 has no hits.

FI24270.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-17 00:19:04 Download gff for FI24270.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 21610998..21611323 1010..1335 99 <- Minus
chr3R 21611448..21612456 1..1009 100   Minus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-26 11:26:11 Download gff for FI24270.complete
Subject Subject Range Query Range Percent Splice Strand
CG31380-RA 1..1218 4..1221 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:19:44 Download gff for FI24270.complete
Subject Subject Range Query Range Percent Splice Strand
CG31380-RA 1..1218 4..1221 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 11:26:11 Download gff for FI24270.complete
Subject Subject Range Query Range Percent Splice Strand
CG31380-RA 1..1335 1..1335 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:19:44 Download gff for FI24270.complete
Subject Subject Range Query Range Percent Splice Strand
CG31380-RA 1..1335 1..1335 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 00:19:04 Download gff for FI24270.complete
Subject Subject Range Query Range Percent Splice Strand
3R 25787997..25788322 1010..1335 99 <- Minus
3R 25788447..25789455 1..1009 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 00:19:04 Download gff for FI24270.complete
Subject Subject Range Query Range Percent Splice Strand
3R 25787997..25788322 1010..1335 99 <- Minus
3R 25788447..25789455 1..1009 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 00:19:04 Download gff for FI24270.complete
Subject Subject Range Query Range Percent Splice Strand
3R 25787997..25788322 1010..1335 99 <- Minus
3R 25788447..25789455 1..1009 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 11:26:11 Download gff for FI24270.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 21613719..21614044 1010..1335 99 <- Minus
arm_3R 21614169..21615177 1..1009 100   Minus

FI24270.pep Sequence

Translation from 0 to 1220

> FI24270.pep
VMAAWLTAEYLEAALRRYYQNNELRVESMVINPALGKGENYGAILTRIHL
VYSSIVEEHLIAKTVLEYEDAETKMKKAPYDIYNRELEIYEQVLPKLQEL
AGEQLCPKILHIDRQRGALIMEDLSYKGFVMAPRLQRLDEQHVSLVLRKL
AKMQAASAVLENNLLENNFSLTEYDKGFFNRYTESFSAYFLGCLKSCANY
LKTQAGYEHHAKLLDELAPYYMGLGLRCFKQEQTHINVLTHGDLWTNNMM
FKYEAGVPSDVLLIDFQYAFWGSPTLDIHHLLNTSAVEQVRSELQMKMRG
VYHDVFVGELQRLGFKGQRLPSRKQFHLESEQKRFYAVHCGLLLLPVLLN
TDETDADFAALLSDQPRGMDMKRRLYLNPGIQDSIKQMVKHFELEGLLDP
WQYEGL*

FI24270.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:53:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF18230-PA 413 GF18230-PA 4..413 1..406 1658 75.9 Plus
Dana\GF17429-PA 415 GF17429-PA 1..410 2..399 940 45.4 Plus
Dana\GF17563-PA 437 GF17563-PA 34..434 5..399 792 40.3 Plus
Dana\GF17430-PA 423 GF17430-PA 19..420 5..399 599 35.4 Plus
Dana\GF17562-PA 424 GF17562-PA 14..422 4..399 578 32.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:53:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG12215-PA 405 GG12215-PA 1..405 2..406 1901 89.9 Plus
Dere\GG12268-PA 413 GG12268-PA 1..408 2..399 969 46.6 Plus
Dere\GG11391-PA 439 GG11391-PA 36..436 5..399 779 42.2 Plus
Dere\GG12269-PA 417 GG12269-PA 35..414 5..399 612 35.9 Plus
Dere\GG11390-PA 433 GG11390-PA 28..431 5..399 578 32.7 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:53:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH14813-PA 415 GH14813-PA 1..410 2..399 965 47.1 Plus
Dgri\GH17368-PA 435 GH17368-PA 33..435 5..402 795 42.3 Plus
Dgri\GH14835-PA 412 GH14835-PA 19..409 4..399 597 36.5 Plus
Dgri\GH14824-PA 419 GH14824-PA 14..417 4..399 545 32.2 Plus
Dgri\GH14015-PA 413 GH14015-PA 6..411 2..399 514 32.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:27:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG31380-PA 405 CG31380-PA 1..405 2..406 2115 100 Plus
CG10514-PA 413 CG10514-PA 7..408 5..399 949 46.6 Plus
CG11892-PA 439 CG11892-PA 36..436 5..399 825 43.4 Plus
CG11892-PB 439 CG11892-PB 36..436 5..399 825 43.4 Plus
CG10513-PB 422 CG10513-PB 18..419 5..399 647 37 Plus
CG11878-PA 420 CG11878-PA 15..418 5..399 571 32 Plus
CG33301-PB 407 CG33301-PB 1..405 1..399 549 32 Plus
CG33301-PA 407 CG33301-PA 1..405 1..399 549 32 Plus
CG11891-PI 417 CG11891-PI 11..415 1..399 539 29.9 Plus
CG11891-PH 417 CG11891-PH 11..415 1..399 539 29.9 Plus
CG11889-PB 417 CG11889-PB 11..415 4..399 515 30.1 Plus
CG11889-PA 417 CG11889-PA 11..415 4..399 515 30.1 Plus
CG16898-PA 407 CG16898-PA 5..405 5..399 456 28.4 Plus
CHKov2-PA 409 CG10675-PA 9..396 5..386 346 26.8 Plus
CG9497-PB 417 CG9497-PB 24..417 9..399 339 27.7 Plus
CG9497-PA 417 CG9497-PA 24..417 9..399 339 27.7 Plus
CG6834-PA 895 CG6834-PA 64..472 5..401 338 25.8 Plus
CG10550-PD 425 CG10550-PD 22..422 5..398 325 24.8 Plus
CG10550-PC 425 CG10550-PC 22..422 5..398 325 24.8 Plus
CG10550-PB 425 CG10550-PB 22..422 5..398 325 24.8 Plus
CG31087-PB 417 CG31087-PB 17..415 2..399 321 27 Plus
CG31087-PA 417 CG31087-PA 17..415 2..399 321 27 Plus
CG31098-PA 417 CG31098-PA 13..416 5..399 319 25.4 Plus
CG32195-PC 401 CG32195-PC 7..399 7..399 315 25.7 Plus
CG32195-PB 401 CG32195-PB 7..399 7..399 315 25.7 Plus
CG32195-PA 401 CG32195-PA 7..399 7..399 315 25.7 Plus
CG10559-PB 415 CG10559-PB 10..411 2..396 312 25.6 Plus
CG31288-PA 428 CG31288-PA 15..427 1..404 311 25.2 Plus
CG10562-PA 405 CG10562-PA 9..404 5..399 306 28 Plus
CG31102-PB 420 CG31102-PB 18..419 4..399 298 25.5 Plus
CG13360-PA 421 CG13360-PA 17..421 5..399 294 25.8 Plus
CG9498-PA 424 CG9498-PA 23..379 9..357 293 28 Plus
CG31102-PA 416 CG31102-PA 18..415 4..399 291 25.4 Plus
CG6830-PA 891 CG6830-PA 485..883 5..399 290 23.3 Plus
CHKov1-PE 410 CG10618-PE 9..408 5..399 289 26.2 Plus
CG31104-PA 420 CG31104-PA 17..414 4..394 287 24.4 Plus
CG6830-PA 891 CG6830-PA 74..455 31..399 284 24.7 Plus
CG10553-PA 414 CG10553-PA 20..414 5..399 278 24.9 Plus
CG10560-PA 414 CG10560-PA 20..414 5..399 278 24.7 Plus
CG31097-PB 420 CG31097-PB 11..405 1..388 270 25.7 Plus
CG6908-PB 415 CG6908-PB 15..391 4..378 267 24.8 Plus
CG6908-PA 449 CG6908-PA 49..425 4..378 267 24.8 Plus
CG7135-PA 417 CG7135-PA 11..373 5..355 265 27.6 Plus
CG6834-PA 895 CG6834-PA 530..895 38..400 254 24.1 Plus
CG13658-PB 422 CG13658-PB 19..414 4..393 249 25.4 Plus
CG31300-PA 422 CG31300-PA 19..416 4..394 237 23.3 Plus
CG11893-PA 416 CG11893-PA 19..410 4..394 226 23.3 Plus
CG31099-PA 400 CG31099-PA 86..325 82..317 220 27.6 Plus
CG1561-PB 635 CG1561-PB 246..628 21..395 205 25.1 Plus
CG13813-PA 430 CG13813-PA 25..357 29..350 194 25.1 Plus
CG33509-PA 389 CG33509-PA 39..349 38..358 189 23.5 Plus
CG9259-PC 422 CG9259-PC 91..367 80..346 184 25.8 Plus
CG9259-PB 422 CG9259-PB 91..367 80..346 184 25.8 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:53:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI23684-PA 415 GI23684-PA 1..410 2..399 962 46.6 Plus
Dmoj\GI23906-PA 404 GI23906-PA 33..404 5..402 657 38.2 Plus
Dmoj\GI23685-PA 381 GI23685-PA 12..379 1..399 468 28 Plus
Dmoj\GI24387-PA 389 GI24387-PA 6..387 2..399 434 30.4 Plus
Dmoj\GI22570-PA 429 GI22570-PA 16..422 2..399 375 28.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:53:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL22295-PA 424 GL22295-PA 8..414 5..406 1601 75.2 Plus
Dper\GL22106-PA 415 GL22106-PA 7..410 5..399 967 47.1 Plus
Dper\GL21714-PA 439 GL21714-PA 36..439 5..402 791 40.8 Plus
Dper\GL21713-PA 420 GL21713-PA 14..418 4..399 590 31.4 Plus
Dper\GL22107-PA 426 GL22107-PA 21..423 4..399 580 35.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:53:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA16220-PA 424 GA16220-PA 8..414 5..406 1620 75.9 Plus
Dpse\GA10365-PA 415 GA10365-PA 7..410 5..399 965 47.1 Plus
Dpse\GA11263-PA 439 GA11263-PA 36..439 5..402 797 41.3 Plus
Dpse\GA11254-PA 420 GA11254-PA 14..418 4..399 589 31.1 Plus
Dpse\GA10364-PA 426 GA10364-PA 21..423 4..399 574 34.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:53:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM10216-PA 405 GM10216-PA 1..405 2..406 2007 94.1 Plus
Dsec\GM17734-PA 413 GM17734-PA 1..408 2..399 963 46.6 Plus
Dsec\GM17834-PA 439 GM17834-PA 36..436 5..399 804 43.9 Plus
Dsec\GM17735-PA 400 GM17735-PA 17..397 4..399 599 35.6 Plus
Dsec\GM17833-PA 420 GM17833-PA 15..418 5..399 576 32.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:53:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD18167-PA 405 GD18167-PA 1..405 2..406 2012 94.6 Plus
Dsim\GD18216-PA 413 GD18216-PA 1..408 2..399 962 46.4 Plus
Dsim\GD18217-PA 439 GD18217-PA 34..436 4..399 649 36.4 Plus
Dsim\GD21203-PA 319 GD21203-PA 3..319 89..402 648 43.5 Plus
Dsim\GD21199-PA 417 GD21199-PA 9..392 2..376 547 31.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:53:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ23244-PA 415 GJ23244-PA 1..410 2..399 967 46.6 Plus
Dvir\GJ24002-PA 435 GJ24002-PA 33..435 5..402 790 42 Plus
Dvir\GJ23247-PA 428 GJ23247-PA 24..425 5..399 584 35.3 Plus
Dvir\GJ23245-PA 396 GJ23245-PA 15..394 5..399 491 28.2 Plus
Dvir\GJ14244-PA 390 GJ14244-PA 6..388 2..399 446 30.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:53:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK14388-PA 405 GK14388-PA 1..404 1..403 1429 65.7 Plus
Dwil\GK14341-PA 415 GK14341-PA 1..410 2..399 979 47.1 Plus
Dwil\GK14342-PA 420 GK14342-PA 9..412 5..399 946 45.6 Plus
Dwil\GK12928-PA 436 GK12928-PA 33..436 5..402 800 41.3 Plus
Dwil\GK14343-PA 424 GK14343-PA 19..421 5..399 611 34.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:53:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE10662-PA 405 GE10662-PA 1..405 2..406 1926 90.9 Plus
Dyak\GE10717-PA 413 GE10717-PA 1..408 2..399 964 46.6 Plus
Dyak\GE10718-PA 439 GE10718-PA 35..436 5..399 649 36.8 Plus
Dyak\GE23588-PA 421 GE23588-PA 15..418 5..399 634 34.2 Plus
Dyak\GE18894-PA 407 GE18894-PA 1..405 1..399 545 31.5 Plus

FI24270.hyp Sequence

Translation from 0 to 1220

> FI24270.hyp
VMAAWLTAEYLEAALRRYYQNNELRVESMVINPALGKGENYGAILTRIHL
VYSSIVEEHLIAKTVLEYEDAETKMKKAPYDIYNRELEIYEQVLPKLQEL
AGEQLCPKILHIDRQRGALIMEDLSYKGFVMAPRLQRLDEQHVSLVLRKL
AKMQAASAVLENNLLENNFSLTEYDKGFFNRYTESFSAYFLGCLKSCANY
LKTQAGYEHHAKLLDELAPYYMGLGLRCFKQEQTHINVLTHGDLWTNNMM
FKYEAGVPSDVLLIDFQYAFWGSPTLDIHHLLNTSAVEQVRSELQMKMRG
VYHDVFVGELQRLGFKGQRLPSRKQFHLESEQKRFYAVHCGLLLLPVLLN
TDETDADFAALLSDQPRGMDMKRRLYLNPGIQDSIKQMVKHFELEGLLDP
WQYEGL*

FI24270.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:00:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG31380-PA 405 CG31380-PA 1..405 2..406 2115 100 Plus
CG10514-PA 413 CG10514-PA 7..408 5..399 949 46.6 Plus
CG11892-PA 439 CG11892-PA 36..436 5..399 825 43.4 Plus
CG11892-PB 439 CG11892-PB 36..436 5..399 825 43.4 Plus
CG10513-PB 422 CG10513-PB 18..419 5..399 647 37 Plus