Clone FI24305 Report

Search the DGRC for FI24305

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:243
Well:5
Vector:pOT2|pOTB7_DraIII
Associated Gene/TranscriptCG2641-RA
Protein status:FI24305.pep: gold
Sequenced Size:1540

Clone Sequence Records

FI24305.complete Sequence

1540 bp assembled on 2013-08-26

GenBank Submission: BT150230.1

> FI24305.complete
CTCAATTTAAATTCTCACTTCGGGTGCGACGCTTGTCTGGTGCTAAATAA
ATTCACGTTGCGCGTCGCCAGTGAATAAGATCTGGAATTTCGAAATATAT
GTGCCAGCACCCACATACTAAATAATAGATTGCATTTCCAAAATGCCTTC
CAGCTGCTCTTTTGAGCTCGATCGCCGCGAACCCATTTACTACAGTGGTG
AGACGGTCAATGGAAGGGCCATTCTGACAACAACATCCGAAAAGTCTGTG
AACGAGGTATACATTCTTTTCGAGGGCGAGGCAAAGGTGCGATGGGATGA
GCGGCGAACAAGGACGAGAGGTGGAAAGACCGAGCACTACACGGAGTATT
TCCGAGGCAAGCAGCAGTACTTGTACACCCGGACATCGGTCTTTGGATCC
GGGAATCTGCCGCCAGGTACGCACACCTACAACTTCTGCATTCCACTGCC
CCTGGAATGCCCCTCATCAGTGGTGGCCCAGTACGGAAAAATCTTCTACG
AGGTCTCCGTGGTCATCGATCGCCAGTGGCGCTTCAACAACGTCTTCAAG
CAGCCACTGACGGTCATACAGACCTACAACCTCAACATGAGCCCCCAATT
GCTGATGCCCCTAGTCCGAGAGGACATCAAGCACTTTTGCTGTTGGCCCT
GCAGTTCAGGCCCGGTTCTATCGACATTAACAATACCCTTCGGTGGTTAC
GCGCCTGGTCAGAAGATACGCTTTACTCTGGAGATTGACAACCAGTCGAG
TGGCTATGATCTGAATGGGATCGAACTGAAACTTAAGCAGATTTACAAAT
TCCAGGCTCAAACGCCGCACCACAAAACTCGCGAAAAGGAGCACAGCCTC
AACAAAAGTTGCCAGCAGGAGCGCGTTTTGAGGCTCTCAAAGAAAAAAAT
TGAAGGAACCCTGGCTATTCCAGCAGTACCGCCCTCTTCCCGCACCGAAG
GCATCATTTCGGTTAGTTACCAAGTTATCCTCACGATCAGCACTGGCGAC
TGCCACGTGGACTCGGACTTTGAGGTGCCGATTGTAATTGGCACCATACC
ATTGATCCAAAGTGCCGAGAATCCAGCCAGTGCAGCACAGTGGATACCGG
AAACGCCGGACACTCCTGCCGGAGCCGCCGCAGATCTGCCTCCCAGTTAT
GACAAGTGCAAGCCACCAACCTTCGAGGAGGCCACAAACTTTGGTGAAAG
GTTCATCGACATCGATCAGGATGAGCACAATCGCACGGATGACTTTATTC
CGCGTTACCCTATGTACACCAACTTTGCCATGCCATCGGCTCCACCTCAA
CCCCCTGAAGAGTTCGCTACCAATCAACCAGTACCCGTTCTGTCACTACC
TCATGATCCCACTGCCCCATTGGTCGGTCAAAACAATACTGACCGTCCAA
CACAATCGTACGGTTGGAACACTAACTCATAAAAAAAAGAAGACATAATC
TCATAAAATGATTTTACTTTGATTTAGCTTTGGATGTTACCAATAAACAT
AGTTTAACCGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAA

FI24305.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-17 00:18:25
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 3621652..3622208 604..1160 2770 99.8 Plus
chr3R 27901430 chr3R 3620929..3621279 254..604 1755 100 Plus
chr3R 27901430 chr3R 3622308..3622659 1161..1512 1745 99.7 Plus
chr3R 27901430 chr3R 3620127..3620380 1..254 1240 99.2 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-17 00:18:23
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 7795592..7796148 604..1160 2785 100 Plus
3R 32079331 3R 7794869..7795219 254..604 1755 100 Plus
3R 32079331 3R 7796248..7796599 1161..1512 1745 99.7 Plus
3R 32079331 3R 7794067..7794320 1..254 1240 99.2 Plus
Blast to na_te.dros performed on 2019-03-17 00:18:23 has no hits.

FI24305.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-17 00:19:06 Download gff for FI24305.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 3620127..3620380 1..254 99 -> Plus
chr3R 3620930..3621279 255..604 100 -> Plus
chr3R 3621653..3622208 605..1160 99 -> Plus
chr3R 3622308..3622659 1161..1512 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-26 11:39:39 Download gff for FI24305.complete
Subject Subject Range Query Range Percent Splice Strand
CG2641-RA 1..1290 143..1432 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:19:47 Download gff for FI24305.complete
Subject Subject Range Query Range Percent Splice Strand
CG2641-RA 1..1290 143..1432 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 11:39:39 Download gff for FI24305.complete
Subject Subject Range Query Range Percent Splice Strand
CG2641-RA 2..1510 5..1512 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:19:47 Download gff for FI24305.complete
Subject Subject Range Query Range Percent Splice Strand
CG2641-RA 2..1510 5..1512 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 00:19:06 Download gff for FI24305.complete
Subject Subject Range Query Range Percent Splice Strand
3R 7794067..7794320 1..254 99 -> Plus
3R 7794870..7795219 255..604 100 -> Plus
3R 7795593..7796148 605..1160 100 -> Plus
3R 7796248..7796599 1161..1512 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 00:19:06 Download gff for FI24305.complete
Subject Subject Range Query Range Percent Splice Strand
3R 7794067..7794320 1..254 99 -> Plus
3R 7794870..7795219 255..604 100 -> Plus
3R 7795593..7796148 605..1160 100 -> Plus
3R 7796248..7796599 1161..1512 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 00:19:06 Download gff for FI24305.complete
Subject Subject Range Query Range Percent Splice Strand
3R 7794067..7794320 1..254 99 -> Plus
3R 7794870..7795219 255..604 100 -> Plus
3R 7795593..7796148 605..1160 100 -> Plus
3R 7796248..7796599 1161..1512 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 11:39:39 Download gff for FI24305.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 3619789..3620042 1..254 99 -> Plus
arm_3R 3620592..3620941 255..604 100 -> Plus
arm_3R 3621315..3621870 605..1160 100 -> Plus
arm_3R 3621970..3622321 1161..1512 99   Plus

FI24305.hyp Sequence

Translation from 142 to 1431

> FI24305.hyp
MPSSCSFELDRREPIYYSGETVNGRAILTTTSEKSVNEVYILFEGEAKVR
WDERRTRTRGGKTEHYTEYFRGKQQYLYTRTSVFGSGNLPPGTHTYNFCI
PLPLECPSSVVAQYGKIFYEVSVVIDRQWRFNNVFKQPLTVIQTYNLNMS
PQLLMPLVREDIKHFCCWPCSSGPVLSTLTIPFGGYAPGQKIRFTLEIDN
QSSGYDLNGIELKLKQIYKFQAQTPHHKTREKEHSLNKSCQQERVLRLSK
KKIEGTLAIPAVPPSSRTEGIISVSYQVILTISTGDCHVDSDFEVPIVIG
TIPLIQSAENPASAAQWIPETPDTPAGAAADLPPSYDKCKPPTFEEATNF
GERFIDIDQDEHNRTDDFIPRYPMYTNFAMPSAPPQPPEEFATNQPVPVL
SLPHDPTAPLVGQNNTDRPTQSYGWNTNS*

FI24305.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:00:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG2641-PA 429 CG2641-PA 1..429 1..429 2308 100 Plus
CG3014-PC 488 CG3014-PC 1..376 1..353 655 36.6 Plus
CG3014-PA 488 CG3014-PA 1..376 1..353 655 36.6 Plus
CG1105-PA 422 CG1105-PA 6..419 5..385 476 31.5 Plus
CG18745-PA 433 CG18745-PA 1..411 1..394 437 27.5 Plus

FI24305.pep Sequence

Translation from 142 to 1431

> FI24305.pep
MPSSCSFELDRREPIYYSGETVNGRAILTTTSEKSVNEVYILFEGEAKVR
WDERRTRTRGGKTEHYTEYFRGKQQYLYTRTSVFGSGNLPPGTHTYNFCI
PLPLECPSSVVAQYGKIFYEVSVVIDRQWRFNNVFKQPLTVIQTYNLNMS
PQLLMPLVREDIKHFCCWPCSSGPVLSTLTIPFGGYAPGQKIRFTLEIDN
QSSGYDLNGIELKLKQIYKFQAQTPHHKTREKEHSLNKSCQQERVLRLSK
KKIEGTLAIPAVPPSSRTEGIISVSYQVILTISTGDCHVDSDFEVPIVIG
TIPLIQSAENPASAAQWIPETPDTPAGAAADLPPSYDKCKPPTFEEATNF
GERFIDIDQDEHNRTDDFIPRYPMYTNFAMPSAPPQPPEEFATNQPVPVL
SLPHDPTAPLVGQNNTDRPTQSYGWNTNS*

FI24305.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:53:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF17684-PA 428 GF17684-PA 1..428 1..427 1646 71.6 Plus
Dana\GF17686-PA 467 GF17686-PA 1..394 1..406 1531 69.7 Plus
Dana\GF17685-PA 416 GF17685-PA 1..384 1..390 1005 50.4 Plus
Dana\GF23084-PA 491 GF23084-PA 1..378 1..353 642 36.3 Plus
Dana\GF17328-PA 418 GF17328-PA 5..415 4..385 486 31.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:53:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG14196-PA 429 GG14196-PA 1..429 1..429 2071 90.9 Plus
Dere\GG24940-PA 498 GG24940-PA 1..376 1..353 658 37 Plus
Dere\GG10147-PA 422 GG10147-PA 5..419 4..385 463 30.5 Plus
Dere\GG24918-PA 513 GG24918-PA 1..310 1..309 454 33.1 Plus
Dere\GG24984-PA 435 GG24984-PA 1..413 1..394 417 27.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:53:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH23509-PA 408 GH23509-PA 1..404 1..409 1511 66.6 Plus
Dgri\GH18619-PA 487 GH18619-PA 1..378 1..353 675 38 Plus
Dgri\GH17389-PA 407 GH17389-PA 5..407 4..388 468 31.4 Plus
Dgri\GH18616-PA 479 GH18616-PA 1..306 1..305 441 33.9 Plus
Dgri\GH19257-PA 430 GH19257-PA 1..418 1..419 424 26.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:18:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG2641-PA 429 CG2641-PA 1..429 1..429 2308 100 Plus
CG3014-PC 488 CG3014-PC 1..376 1..353 655 36.6 Plus
CG3014-PA 488 CG3014-PA 1..376 1..353 655 36.6 Plus
CG1105-PA 422 CG1105-PA 6..419 5..385 476 31.5 Plus
CG18745-PA 433 CG18745-PA 1..411 1..394 437 27.5 Plus
CG2993-PA 511 CG2993-PA 1..310 1..309 436 33.1 Plus
CG2993-PB 524 CG2993-PB 1..310 1..309 436 33.1 Plus
CG2993-PC 545 CG2993-PC 1..310 1..309 436 33.1 Plus
CG18747-PB 418 CG18747-PB 1..400 1..385 373 27.1 Plus
CG18746-PA 438 CG18746-PA 4..405 5..375 370 27.7 Plus
CG14696-PA 457 CG14696-PA 1..422 1..422 368 29.6 Plus
CG18748-PC 409 CG18748-PC 16..388 15..375 363 27 Plus
CG10086-PA 469 CG10086-PA 1..439 1..390 325 25 Plus
CG18748-PB 359 CG18748-PB 42..338 89..375 292 28.1 Plus
Vdup1-PE 342 CG7047-PE 13..329 10..333 203 23.4 Plus
Vdup1-PD 342 CG7047-PD 13..329 10..333 203 23.4 Plus
Vdup1-PA 342 CG7047-PA 13..329 10..333 203 23.4 Plus
Vdup1-PC 342 CG7047-PC 13..329 10..333 203 23.4 Plus
Vdup1-PB 342 CG7047-PB 13..329 10..333 203 23.4 Plus
CG18744-PB 410 CG18744-PB 1..397 1..375 159 23.2 Plus
Leash-PA 520 CG4674-PA 10..282 9..278 159 20 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:53:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI24130-PA 398 GI24130-PA 1..385 1..385 1527 70.6 Plus
Dmoj\GI23463-PA 468 GI23463-PA 1..399 1..384 675 37 Plus
Dmoj\GI23546-PA 409 GI23546-PA 5..409 4..388 485 32 Plus
Dmoj\GI23461-PA 494 GI23461-PA 1..306 1..305 443 34.2 Plus
Dmoj\GI23468-PA 405 GI23468-PA 1..392 1..388 399 27.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:53:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL12457-PA 430 GL12457-PA 1..429 1..428 1621 68.2 Plus
Dper\GL22035-PA 420 GL22035-PA 5..417 4..385 504 32.2 Plus
Dper\GL12147-PA 512 GL12147-PA 1..310 1..309 463 33.4 Plus
Dper\GL12155-PA 435 GL12155-PA 1..413 1..394 420 28.3 Plus
Dper\GL12153-PA 403 GL12153-PA 4..312 5..310 374 28.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:53:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA15407-PA 430 GA15407-PA 1..429 1..428 1607 68.4 Plus
Dpse\GA15673-PA 497 GA15673-PA 1..414 1..390 655 35.6 Plus
Dpse\GA10727-PA 420 GA10727-PA 5..417 4..385 505 32.5 Plus
Dpse\GA15564-PA 512 GA15564-PA 1..310 1..309 462 33.4 Plus
Dpse\GA15063-PA 435 GA15063-PA 1..410 1..391 419 28.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:53:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM10974-PA 429 GM10974-PA 1..429 1..429 2255 97.4 Plus
Dsec\GM10455-PA 488 GM10455-PA 1..376 1..353 663 37.3 Plus
Dsec\GM10515-PA 422 GM10515-PA 5..419 4..385 462 30.5 Plus
Dsec\GM10451-PA 512 GM10451-PA 1..310 1..309 450 33.1 Plus
Dsec\GM10459-PA 435 GM10459-PA 1..413 1..394 402 26.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:53:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD19948-PA 329 GD19948-PA 1..325 7..331 1720 98.5 Plus
Dsim\GD19949-PA 93 GD19949-PA 3..93 339..429 453 93.4 Plus
Dsim\GD19457-PA 511 GD19457-PA 1..310 1..309 449 33.1 Plus
Dsim\GD19463-PA 435 GD19463-PA 1..413 1..394 401 26.4 Plus
Dsim\GD19461-PA 438 GD19461-PA 4..322 5..319 378 30.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:53:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ10953-PA 391 GJ10953-PA 1..388 1..409 1443 65.3 Plus
Dvir\GJ10218-PA 477 GJ10218-PA 1..376 1..353 655 36.6 Plus
Dvir\GJ24027-PA 410 GJ24027-PA 5..410 4..388 473 31.8 Plus
Dvir\GJ10216-PA 491 GJ10216-PA 1..306 1..305 441 33.9 Plus
Dvir\GJ10223-PA 406 GJ10223-PA 1..388 1..385 416 28.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:53:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK12020-PA 424 GK12020-PA 1..424 1..429 1593 69.5 Plus
Dwil\GK12023-PA 471 GK12023-PA 1..397 1..378 668 37.1 Plus
Dwil\GK10823-PA 425 GK10823-PA 5..421 4..384 487 30.5 Plus
Dwil\GK11054-PA 503 GK11054-PA 1..310 1..309 443 32.5 Plus
Dwil\GK11060-PA 431 GK11060-PA 1..413 1..394 434 27.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:53:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE24942-PA 429 GE24942-PA 1..429 1..429 2128 94.2 Plus
Dyak\GE25769-PA 497 GE25769-PA 1..376 1..353 653 36.6 Plus
Dyak\GE25824-PA 422 GE25824-PA 5..419 4..385 459 30.2 Plus
Dyak\GE11110-PA 518 GE11110-PA 1..310 1..309 451 33.1 Plus
Dyak\GE25773-PA 435 GE25773-PA 1..413 1..394 401 26.9 Plus