Clone FI24493 Report

Search the DGRC for FI24493

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:244
Well:93
Vector:pOT2|pOTB7_DraIII
Associated Gene/TranscriptCG5653-RA
Protein status:FI24493.pep: gold
Sequenced Size:1493

Clone Sequence Records

FI24493.complete Sequence

1493 bp assembled on 2013-08-22

GenBank Submission: BT150210.1

> FI24493.complete
CAACGTTTCAAAATGGAAAAATGCCGTGCCTCCTCTAGGATAATCATAAT
CGGAGCAGGAGTTTCGGGCATAGCCGCCGCCACTCGACTCCTGCAAAACA
ATTTCCAGAATGTTCAGATCCTGGAGGCGGAGGATCGCATTGGCGGGCGG
ATCAACACCGTGTATTTTGGTGACAACGTCATCGATTTGGGAGCCCAGTG
GTGTCATGGAAAGCAGCAAAATTGTGTATACGACATGGTCAAGGATATGG
GTATCCTGCACGAGACAGGCGACTATTACAGTCCCATAAAGAGGGTGAGA
TCCAACAAGGAGGTGGTTCCACATGAGTTGGCCTGCAGGATACACGACAT
TGCTGTGAAGAGCATGCCGAGTGGACCTCACCCGGTTGTGGGATCCTTTG
GCACCCACCTGACTCAGACCTTCTGGCGCAAGATCGAGTCCGAGCTACCC
CAAGTGAATAGGGATGTGGCTAGTGAGGCCTTGAATACATTTGCGAAGCA
TGAAAGCTCTATTATCGGTGCGGACAATCTTTTCGAGGTCTCCGTTAGGG
AACACATCGAGTACCACGAATGTGATGGCGACAAGCTGCTCCACTGGGGA
ACGAAGGGTTACCGGCGCTTCCTGCGGCTGCTGATGAAGGTCAGCGCGGA
TACGCCAGAAGAGCTGGGACTACTGGAAGGACGTATTCAACTTGATATGA
AGGTCATCAAGATTGAGTTGGCGTGCCCCCGTAAGGTAATCCTGCGCTGC
CAGGATGGGGATTACTTCGAGGCGGACCACGTCATCTGCACCGTTTCCCT
GGGAGTCCTGCAGGAGCAGCACGAGAAACTGTTCGTCCCGCCGCTGCCCG
CAGCCAAGGTGAATGCCATTCGCAGCCTCACCCTAGGCACTGTGAACAAA
CTGTATTTGGAGTATGAGAAGCAACCTCTTCCTGACGGCTGGGTGGGTTT
CTTCTGTTTTTGGCTGGAAGAGGATCTGATAGAGCTGCGAAAGACGGAAT
ATTTTTGGGTGGAGGGTATAACCGGTGTACACATGATCACTTGTCAGCCC
CGAATGTTGATGGCCTGGGTGAATGGTCCGCATGGACGCCACATGGAGAC
CCTGTCCGATGAGAAAGTCCTTGAGGGCTTGTACTGGCTTTTCCGAAAGT
TCCTCACTTTCGAAATTCCGCCGCCAAAGCGTTTCGTTCGCAGCTCGTGG
TTTTCGAATCCGAATTTCCGTGGCAGTTGGAGTTATCGTGGAGTTATGGC
CGATGAAAGGAATACGGGCCCCTGGGATCTAGAGTCTCCTGTGTTGGGCG
AAGATGGTCATTTAGGCCTCCTTTTTGCCGGAGAAGCGTCTAGCAGGAAT
CACTTTTCCACCGTTCACGGAGCTGTGGAGGCGGGCTATCGGGAGGCAGA
CCGGCTCATTGATCATTACACCTCATGCAGTGTCAGTGCCTGAAAAATAT
ATTTTTTTATCGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

FI24493.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-17 00:16:27
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 8956975..8958437 1463..1 7210 99.5 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-17 00:16:25
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 8964911..8966374 1464..1 7230 99.6 Minus
Blast to na_te.dros performed on 2019-03-17 00:16:26 has no hits.

FI24493.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-17 00:17:10 Download gff for FI24493.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 8956975..8958437 1..1463 99   Minus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-22 16:42:04 Download gff for FI24493.complete
Subject Subject Range Query Range Percent Splice Strand
CG5653-RA 1..1431 13..1443 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:18:27 Download gff for FI24493.complete
Subject Subject Range Query Range Percent Splice Strand
CG5653-RA 1..1431 13..1443 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 16:42:04 Download gff for FI24493.complete
Subject Subject Range Query Range Percent Splice Strand
CG5653-RA 1..1463 1..1463 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:18:27 Download gff for FI24493.complete
Subject Subject Range Query Range Percent Splice Strand
CG5653-RA 1..1463 1..1463 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 00:17:10 Download gff for FI24493.complete
Subject Subject Range Query Range Percent Splice Strand
3L 8964912..8966374 1..1463 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 00:17:10 Download gff for FI24493.complete
Subject Subject Range Query Range Percent Splice Strand
3L 8964912..8966374 1..1463 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 00:17:10 Download gff for FI24493.complete
Subject Subject Range Query Range Percent Splice Strand
3L 8964912..8966374 1..1463 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 16:42:04 Download gff for FI24493.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 8958012..8959474 1..1463 99   Minus

FI24493.hyp Sequence

Translation from 0 to 1442

> FI24493.hyp
QRFKMEKCRASSRIIIIGAGVSGIAAATRLLQNNFQNVQILEAEDRIGGR
INTVYFGDNVIDLGAQWCHGKQQNCVYDMVKDMGILHETGDYYSPIKRVR
SNKEVVPHELACRIHDIAVKSMPSGPHPVVGSFGTHLTQTFWRKIESELP
QVNRDVASEALNTFAKHESSIIGADNLFEVSVREHIEYHECDGDKLLHWG
TKGYRRFLRLLMKVSADTPEELGLLEGRIQLDMKVIKIELACPRKVILRC
QDGDYFEADHVICTVSLGVLQEQHEKLFVPPLPAAKVNAIRSLTLGTVNK
LYLEYEKQPLPDGWVGFFCFWLEEDLIELRKTEYFWVEGITGVHMITCQP
RMLMAWVNGPHGRHMETLSDEKVLEGLYWLFRKFLTFEIPPPKRFVRSSW
FSNPNFRGSWSYRGVMADERNTGPWDLESPVLGEDGHLGLLFAGEASSRN
HFSTVHGAVEAGYREADRLIDHYTSCSVSA*

FI24493.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:59:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG5653-PA 476 CG5653-PA 1..476 5..480 2552 100 Plus
CG7460-PC 486 CG7460-PC 9..479 5..473 1307 51.9 Plus
CG7460-PB 486 CG7460-PB 9..479 5..473 1307 51.9 Plus
CG6034-PA 479 CG6034-PA 12..473 7..473 1167 48.3 Plus
CG7737-PA 509 CG7737-PA 11..496 13..473 984 43.3 Plus

FI24493.pep Sequence

Translation from 0 to 1442

> FI24493.pep
QRFKMEKCRASSRIIIIGAGVSGIAAATRLLQNNFQNVQILEAEDRIGGR
INTVYFGDNVIDLGAQWCHGKQQNCVYDMVKDMGILHETGDYYSPIKRVR
SNKEVVPHELACRIHDIAVKSMPSGPHPVVGSFGTHLTQTFWRKIESELP
QVNRDVASEALNTFAKHESSIIGADNLFEVSVREHIEYHECDGDKLLHWG
TKGYRRFLRLLMKVSADTPEELGLLEGRIQLDMKVIKIELACPRKVILRC
QDGDYFEADHVICTVSLGVLQEQHEKLFVPPLPAAKVNAIRSLTLGTVNK
LYLEYEKQPLPDGWVGFFCFWLEEDLIELRKTEYFWVEGITGVHMITCQP
RMLMAWVNGPHGRHMETLSDEKVLEGLYWLFRKFLTFEIPPPKRFVRSSW
FSNPNFRGSWSYRGVMADERNTGPWDLESPVLGEDGHLGLLFAGEASSRN
HFSTVHGAVEAGYREADRLIDHYTSCSVSA*

FI24493.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:51:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF10138-PA 472 GF10138-PA 1..472 5..477 1577 61.5 Plus
Dana\GF23894-PA 478 GF23894-PA 13..472 7..473 1128 50.1 Plus
Dana\GF12528-PA 509 GF12528-PA 11..496 13..473 980 43.1 Plus
Dana\GF18451-PA 594 GF18451-PA 50..567 13..470 433 27.9 Plus
Dana\GF14703-PA 514 GF14703-PA 31..511 1..478 406 26.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:51:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG15049-PA 476 GG15049-PA 1..476 5..480 2370 92 Plus
Dere\GG15789-PA 477 GG15789-PA 12..473 7..475 1088 48.6 Plus
Dere\GG20170-PA 509 GG20170-PA 11..496 13..473 988 43.1 Plus
Dere\GG21160-PA 504 GG21160-PA 32..497 5..473 421 28 Plus
Dere\GG11620-PA 583 GG11620-PA 41..556 13..470 407 27.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:51:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH18003-PA 616 GH18003-PA 145..611 7..474 1351 55.8 Plus
Dgri\GH15342-PA 481 GH15342-PA 10..476 7..474 1351 56 Plus
Dgri\GH15343-PA 478 GH15343-PA 9..478 7..477 1330 51.4 Plus
Dgri\GH19935-PA 519 GH19935-PA 1..495 5..473 1011 43.4 Plus
Dgri\GH18004-PA 306 GH18004-PA 9..305 7..304 781 48.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:22:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG5653-PA 476 CG5653-PA 1..476 5..480 2552 100 Plus
CG7460-PC 486 CG7460-PC 9..479 5..473 1307 51.9 Plus
CG7460-PB 486 CG7460-PB 9..479 5..473 1307 51.9 Plus
CG6034-PA 479 CG6034-PA 12..473 7..473 1167 48.3 Plus
CG7737-PA 509 CG7737-PA 11..496 13..473 984 43.3 Plus
CG7737-PB 543 CG7737-PB 45..530 13..473 984 43.3 Plus
CG8032-PB 583 CG8032-PB 41..556 13..470 411 27.8 Plus
CG8032-PA 583 CG8032-PA 41..556 13..470 411 27.8 Plus
CG10561-PA 504 CG10561-PA 32..497 5..473 402 28.2 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:51:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI12948-PA 494 GI12948-PA 8..484 1..477 1350 51.3 Plus
Dmoj\GI12947-PA 480 GI12947-PA 10..477 7..475 1309 54.2 Plus
Dmoj\GI12393-PA 478 GI12393-PA 1..473 5..475 1255 51.5 Plus
Dmoj\GI19892-PA 508 GI19892-PA 1..504 5..480 1020 42.9 Plus
Dmoj\GI19893-PA 452 GI19893-PA 3..444 45..479 659 34.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:51:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL11895-PA 472 GL11895-PA 1..472 5..477 1574 59.6 Plus
Dper\GL19976-PA 508 GL19976-PA 11..495 13..473 1001 43.4 Plus
Dper\GL25224-PA 176 GL25224-PA 28..172 329..473 487 62.8 Plus
Dper\GL23965-PA 596 GL23965-PA 47..568 10..470 439 28.2 Plus
Dper\GL25222-PA 162 GL25222-PA 18..162 7..157 287 49.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:51:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA19035-PA 472 GA19035-PA 1..472 5..477 1575 59.8 Plus
Dpse\GA20369-PA 486 GA20369-PA 9..481 5..475 1260 51.5 Plus
Dpse\GA19311-PA 482 GA19311-PA 18..478 7..473 1205 52.9 Plus
Dpse\GA20553-PA 508 GA20553-PA 11..495 13..473 999 43.2 Plus
Dpse\GA20779-PA 596 GA20779-PA 47..568 10..470 437 28.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:51:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM24902-PA 476 GM24902-PA 1..476 5..480 2515 97.9 Plus
Dsec\GM24313-PA 479 GM24313-PA 12..473 7..473 1120 49 Plus
Dsec\GM21259-PA 509 GM21259-PA 11..496 13..473 968 42.1 Plus
Dsec\GM17327-PA 504 GM17327-PA 32..497 5..473 430 28.6 Plus
Dsec\GM23747-PA 583 GM23747-PA 41..556 13..470 417 27.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:51:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD12952-PA 476 GD12952-PA 1..476 5..480 2522 98.3 Plus
Dsim\GD12383-PA 479 GD12383-PA 12..473 7..473 1133 49.3 Plus
Dsim\GD10773-PA 509 GD10773-PA 11..496 13..473 973 42.5 Plus
Dsim\GD18558-PA 583 GD18558-PA 41..556 13..470 417 28 Plus
Dsim\GD24185-PA 465 GD24185-PA 32..458 5..473 328 27 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:51:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13090-PA 487 GJ13090-PA 13..484 5..477 1380 52.6 Plus
Dvir\GJ13089-PA 476 GJ13089-PA 5..472 7..475 1367 54.6 Plus
Dvir\GJ12284-PA 486 GJ12284-PA 9..481 5..475 1288 52.3 Plus
Dvir\GJ15061-PA 505 GJ15061-PA 1..494 5..473 978 42.5 Plus
Dvir\GJ15062-PA 513 GJ15062-PA 37..509 13..473 790 37.6 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:51:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK12329-PA 490 GK12329-PA 20..485 9..474 1311 52.6 Plus
Dwil\GK12302-PA 486 GK12302-PA 9..481 5..475 1305 53.4 Plus
Dwil\GK19228-PA 473 GK19228-PA 1..472 5..475 1301 52.5 Plus
Dwil\GK19151-PA 467 GK19151-PA 1..465 5..473 1222 51.3 Plus
Dwil\GK12300-PA 469 GK12300-PA 1..467 5..473 1178 48.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:51:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE21272-PA 476 GE21272-PA 1..476 5..480 2353 90.5 Plus
Dyak\GE22127-PA 477 GE22127-PA 12..471 7..473 1105 49.3 Plus
Dyak\GE12859-PA 509 GE12859-PA 11..496 13..473 971 42.3 Plus
Dyak\GE13233-PA 504 GE13233-PA 32..497 5..473 431 28.6 Plus
Dyak\GE25891-PA 583 GE25891-PA 41..556 13..470 425 27.9 Plus