FMO01005.5prime Sequence
655 bp (655 high quality bases) assembled on 2008-03-07
> FMO01005.5prime
AAAAAAAAAGTTATCAGTCGACATGTCGATTCTAGCCTACAACGGAGGAT
GTGTAGTGGCCATGCGCGGAAAGGACTGCGTGGCGATTGCCACGGATCAC
CGATTCGGCATTCAGGCTCAGACGATCTCCACGGACTTCAAGAAGGTGTT
CCACATCGGCCCACGGATGTTCCTCGGGCTCACAGGCCTGCAGACGGACA
TCCTTACTGTTCGCGATCGCCTGATGTTCCGCAAGAATCTGTACGAGACA
CGCGAAAACCGTGAAATGTGTCCCAAGCCCTTCTCGGCCATGATGTCCAG
CTTTCTGTACGAGCACCGCTTTGGCCCGTACTTCATTGAGCCGGTCGTTG
CTGGCCTGGATCCCAAGACCATGGAGCCTTTTATCTGCAACATGGACCTG
ATCGGCTGCCCCAACGCACCCGATGACTTCGTTGTGGCCGGCACCTGTGC
GGAGCAATTGTATGGCATGTGCGAAACCCTGTGGAAACCCGATCTCGAGC
CGGACCAGCTGTTTGAGGTCATCGCCCAGTCCATTGTGAACGCATTCGAT
CGCGACGCCATGAGCGGTTGGGGTGCCACCGTCTACATTATCGAGAAGGA
CAAGATCACGGAGCGCACACTGAAGACCCGCATGGACGCAAGCTTTCTAG
ACCAT
FMO01005.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:25:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Prosbeta3-RA | 914 | CG11981-RA | 155..770 | 22..637 | 3080 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:25:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 9005457..9006072 | 637..22 | 3080 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:25:13 has no hits.
FMO01005.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:42:37 Download gff for
FMO01005.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11981-RA | 155..770 | 22..637 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:02:09 Download gff for
FMO01005.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Prosbeta3-RA | 155..770 | 22..637 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:58:36 Download gff for
FMO01005.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Prosbeta3-RA | 155..770 | 22..637 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:58:36 Download gff for
FMO01005.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 9005457..9006072 | 22..637 | 100 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:02:09 Download gff for
FMO01005.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 4831179..4831794 | 22..637 | 100 | -> | Minus |
